RNA–Protein interactions for RNA: ENST00000595792.1

PNKP-206, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 645 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-206ENST00000595792 STAC2Q6ZMT1 411 aa15.9■□□□□ 0.14
PNKP-206ENST00000595792 C16orf62Q7Z3J2 963 aa15.9■□□□□ 0.14
PNKP-206ENST00000595792 RNF130Q86XS8 419 aa15.9■□□□□ 0.14
PNKP-206ENST00000595792 FAM71CQ8NEG0 241 aa15.9■□□□□ 0.14
PNKP-206ENST00000595792 OR52E6Q96RD3 313 aa15.9■□□□□ 0.14
PNKP-206ENST00000595792 CCL19Q99731 98 aa15.9■□□□□ 0.14
PNKP-206ENST00000595792 THUMPD3Q9BV44 507 aaKnown RBP15.9■□□□□ 0.14
PNKP-206ENST00000595792 LAT2Q9GZY6 243 aa15.9■□□□□ 0.14
PNKP-206ENST00000595792 QRSL1Q9H0R6 528 aaKnown RBP15.9■□□□□ 0.14
PNKP-206ENST00000595792 PLSCR4Q9NRQ2 329 aa15.9■□□□□ 0.14
PNKP-206ENST00000595792 STOML1Q9UBI4 398 aa15.9■□□□□ 0.14
PNKP-206ENST00000595792 GPC6Q9Y625 555 aaPredicted RBP15.9■□□□□ 0.14
PNKP-206ENST00000595792 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.89■□□□□ 0.13
PNKP-206ENST00000595792 CLDN24A6NM45 220 aa15.89■□□□□ 0.13
PNKP-206ENST00000595792 KLF11O14901 512 aa15.89■□□□□ 0.13
PNKP-206ENST00000595792 SMPD2O60906 423 aa15.89■□□□□ 0.13
PNKP-206ENST00000595792 GUSBP08236 651 aa15.89■□□□□ 0.13
PNKP-206ENST00000595792 ME2P23368 584 aa15.89■□□□□ 0.13
PNKP-206ENST00000595792 ELK4P28324 431 aa15.89■□□□□ 0.13
PNKP-206ENST00000595792 ADH6P28332 368 aa15.89■□□□□ 0.13
PNKP-206ENST00000595792 PGM1P36871 562 aa15.89■□□□□ 0.13
PNKP-206ENST00000595792 EIF1P41567 113 aaKnown RBP15.89■□□□□ 0.13
PNKP-206ENST00000595792 CHRNEQ04844 493 aa15.89■□□□□ 0.13
PNKP-206ENST00000595792 SYPL1Q16563 259 aa15.89■□□□□ 0.13
PNKP-206ENST00000595792 ZNF239Q16600 458 aaKnown RBP15.89■□□□□ 0.13
PNKP-206ENST00000595792 TMEM176BQ3YBM2 270 aaPredicted RBP15.89■□□□□ 0.13
PNKP-206ENST00000595792 PDCD4Q53EL6 469 aaKnown RBP15.89■□□□□ 0.13
PNKP-206ENST00000595792 NXNQ6DKJ4 435 aa15.89■□□□□ 0.13
PNKP-206ENST00000595792 CIARTQ8N365 385 aaPredicted RBP15.89■□□□□ 0.13
PNKP-206ENST00000595792 TMCO5AQ8N6Q1 288 aa15.89■□□□□ 0.13
PNKP-206ENST00000595792 ANKFN1Q8N957 763 aa15.89■□□□□ 0.13
PNKP-206ENST00000595792 ATP6V1C2Q8NEY4 427 aa15.89■□□□□ 0.13
PNKP-206ENST00000595792 VPS37AQ8NEZ2 397 aa15.89■□□□□ 0.13
PNKP-206ENST00000595792 OR9I1Q8NGQ6 314 aa15.89■□□□□ 0.13
PNKP-206ENST00000595792 PIWIL2Q8TC59 973 aaKnown RBP15.89■□□□□ 0.13
PNKP-206ENST00000595792 ABHD3Q8WU67 409 aa15.89■□□□□ 0.13
PNKP-206ENST00000595792 PERPQ96FX8 193 aa15.89■□□□□ 0.13
PNKP-206ENST00000595792 C18orf12Q96KH6 178 aa15.89■□□□□ 0.13
PNKP-206ENST00000595792 EXD2Q9NVH0 621 aa15.89■□□□□ 0.13
PNKP-206ENST00000595792 WDR45Q9Y484 360 aa15.89■□□□□ 0.13
PNKP-206ENST00000595792 NIPBLQ6KC79 2804 aaeCLIP15.88■□□□□ 0.13
PNKP-206ENST00000595792 A0A1W2PNR3 127 aa15.88■□□□□ 0.13
PNKP-206ENST00000595792 SLCO1B7G3V0H7 640 aa15.88■□□□□ 0.13
PNKP-206ENST00000595792 H6PDO95479 791 aa15.88■□□□□ 0.13
PNKP-206ENST00000595792 PLAUP00749 431 aa15.88■□□□□ 0.13
PNKP-206ENST00000595792 CHRM4P08173 479 aa15.88■□□□□ 0.13
PNKP-206ENST00000595792 UBTFL6P0CB48 400 aaPredicted RBP15.88■□□□□ 0.13
PNKP-206ENST00000595792 ADSLP30566 484 aaPredicted RBP15.88■□□□□ 0.13
PNKP-206ENST00000595792 CHI3L1P36222 383 aaPredicted RBP15.88■□□□□ 0.13
PNKP-206ENST00000595792 KHKP50053 298 aa15.88■□□□□ 0.13
PNKP-206ENST00000595792 CCR4P51679 360 aa15.88■□□□□ 0.13
PNKP-206ENST00000595792 MVDP53602 400 aa15.88■□□□□ 0.13
PNKP-206ENST00000595792 SESN3P58005 492 aa15.88■□□□□ 0.13
PNKP-206ENST00000595792 TSC22D1Q15714 1073 aa15.88■□□□□ 0.13
PNKP-206ENST00000595792 KRTAP21-3Q3LHN1 58 aa15.88■□□□□ 0.13
PNKP-206ENST00000595792 GTDC1Q4AE62 458 aa15.88■□□□□ 0.13
PNKP-206ENST00000595792 ALKBH2Q6NS38 261 aa15.88■□□□□ 0.13
PNKP-206ENST00000595792 WFDC8Q8IUA0 241 aa15.88■□□□□ 0.13
PNKP-206ENST00000595792 P3H2Q8IVL5 708 aa15.88■□□□□ 0.13
PNKP-206ENST00000595792 ZNF619Q8N2I2 560 aa15.88■□□□□ 0.13
PNKP-206ENST00000595792 PNPT1Q8TCS8 783 aaKnown RBP15.88■□□□□ 0.13
PNKP-206ENST00000595792 MRGPRX4Q96LA9 322 aa15.88■□□□□ 0.13
PNKP-206ENST00000595792 PANX1Q96RD7 426 aa15.88■□□□□ 0.13
PNKP-206ENST00000595792 SLC38A1Q9H2H9 487 aa15.88■□□□□ 0.13
PNKP-206ENST00000595792 SLCO1B3Q9NPD5 702 aa15.88■□□□□ 0.13
PNKP-206ENST00000595792 PAQR5Q9NXK6 330 aaPredicted RBP15.88■□□□□ 0.13
PNKP-206ENST00000595792 ARID1AO14497 2285 aa15.88■□□□□ 0.13
PNKP-206ENST00000595792 KLF4O43474 513 aa15.87■□□□□ 0.13
PNKP-206ENST00000595792 CYP7B1O75881 506 aa15.87■□□□□ 0.13
PNKP-206ENST00000595792 CSTAP01040 98 aa15.87■□□□□ 0.13
PNKP-206ENST00000595792 INHBBP09529 407 aa15.87■□□□□ 0.13
PNKP-206ENST00000595792 CARD18P57730 90 aa15.87■□□□□ 0.13
PNKP-206ENST00000595792 CBFBQ13951 182 aa15.87■□□□□ 0.13
PNKP-206ENST00000595792 TIGD2Q4W5G0 525 aa15.87■□□□□ 0.13
PNKP-206ENST00000595792 SHEQ5VZ18 495 aa15.87■□□□□ 0.13
PNKP-206ENST00000595792 EPGNQ6UW88 154 aa15.87■□□□□ 0.13
PNKP-206ENST00000595792 DNAJC14Q6Y2X3 702 aaPredicted RBP15.87■□□□□ 0.13
PNKP-206ENST00000595792 ZNF621Q6ZSS3 439 aa15.87■□□□□ 0.13
PNKP-206ENST00000595792 NUFIP2Q7Z417 695 aaKnown RBP15.87■□□□□ 0.13
PNKP-206ENST00000595792 BIVMQ86UB2 503 aa15.87■□□□□ 0.13
PNKP-206ENST00000595792 TOR1AIP2Q8NFQ8 470 aa15.87■□□□□ 0.13
PNKP-206ENST00000595792 RNF128Q8TEB7 428 aa15.87■□□□□ 0.13
PNKP-206ENST00000595792 ZFP90Q8TF47 636 aa15.87■□□□□ 0.13
PNKP-206ENST00000595792 Q96MF0 132 aa15.87■□□□□ 0.13
PNKP-206ENST00000595792 ACTR6Q9GZN1 396 aa15.87■□□□□ 0.13
PNKP-206ENST00000595792 SDR39U1Q9NRG7 319 aaPredicted RBP15.87■□□□□ 0.13
PNKP-206ENST00000595792 ING1Q9UK53 422 aaPredicted RBP15.87■□□□□ 0.13
PNKP-206ENST00000595792 USH1CQ9Y6N9 552 aa15.87■□□□□ 0.13
PNKP-206ENST00000595792 CADP27708 2225 aa15.86■□□□□ 0.13
PNKP-206ENST00000595792 IGHV3-15A0A0B4J1V0 119 aa15.86■□□□□ 0.13
PNKP-206ENST00000595792 AGR2O95994 175 aa15.86■□□□□ 0.13
PNKP-206ENST00000595792 IDO1P14902 403 aa15.86■□□□□ 0.13
PNKP-206ENST00000595792 ENPP1P22413 925 aa15.86■□□□□ 0.13
PNKP-206ENST00000595792 LTBQ06643 244 aa15.86■□□□□ 0.13
PNKP-206ENST00000595792 SELENBP1Q13228 472 aa15.86■□□□□ 0.13
PNKP-206ENST00000595792 GPAT3Q53EU6 434 aa15.86■□□□□ 0.13
PNKP-206ENST00000595792 ATAD3BQ5T9A4 648 aa15.86■□□□□ 0.13
PNKP-206ENST00000595792 GLB1L3Q8NCI6 653 aaPredicted RBP15.86■□□□□ 0.13
PNKP-206ENST00000595792 CNOT9Q92600 299 aaKnown RBP15.86■□□□□ 0.13
PNKP-206ENST00000595792 PIGTQ969N2 578 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms