RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 ZMIZ1Q9ULJ6 1067 aa15.27■□□□□ 0.04
LIG1-206ENST00000594067 ATG2BQ96BY7 2078 aa15.27■□□□□ 0.04
LIG1-206ENST00000594067 FAM86C2PA6NEL3 165 aa15.27■□□□□ 0.03
LIG1-206ENST00000594067 MT-ND5P03915 603 aa15.27■□□□□ 0.03
LIG1-206ENST00000594067 GYPBP06028 91 aa15.27■□□□□ 0.03
LIG1-206ENST00000594067 THBS1P07996 1170 aa15.27■□□□□ 0.03
LIG1-206ENST00000594067 ANXA3P12429 323 aa15.27■□□□□ 0.03
LIG1-206ENST00000594067 LAMP2P13473 410 aa15.27■□□□□ 0.03
LIG1-206ENST00000594067 IL9P15248 144 aa15.27■□□□□ 0.03
LIG1-206ENST00000594067 NPR2P20594 1047 aa15.27■□□□□ 0.03
LIG1-206ENST00000594067 PRKACBP22694 351 aa15.27■□□□□ 0.03
LIG1-206ENST00000594067 ABHD4Q8TB40 342 aa15.27■□□□□ 0.03
LIG1-206ENST00000594067 BPIFA2Q96DR5 249 aa15.27■□□□□ 0.03
LIG1-206ENST00000594067 AHCYL2Q96HN2 611 aaKnown RBP15.27■□□□□ 0.03
LIG1-206ENST00000594067 TTTY10Q9BZA0 68 aa15.27■□□□□ 0.03
LIG1-206ENST00000594067 SRMSQ9H3Y6 488 aa15.27■□□□□ 0.03
LIG1-206ENST00000594067 CMC2Q9NRP2 79 aa15.27■□□□□ 0.03
LIG1-206ENST00000594067 NUP50Q9UKX7 468 aa15.27■□□□□ 0.03
LIG1-206ENST00000594067 CLEC4AQ9UMR7 237 aa15.27■□□□□ 0.03
LIG1-206ENST00000594067 DAPP1Q9UN19 280 aa15.27■□□□□ 0.03
LIG1-206ENST00000594067 TBC1D3DA0A087WVF3 549 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 TBC1D3IA0A087WXS9 549 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 TBC1D3EA0A087X179 549 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 TBC1D3LB9A6J9 549 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 CTSVO60911 334 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 KCNJ13O60928 360 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 TCRBP04435 133 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 APODP05090 189 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 TBC1D3HP0C7X1 549 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 F8A1P23610 371 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 NDUFS1P28331 727 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 ACSL1P33121 698 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 OR12D2P58182 307 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 SUZ12Q15022 739 aaKnown RBP15.26■□□□□ 0.03
LIG1-206ENST00000594067 SLC25A35Q3KQZ1 300 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 CD276Q5ZPR3 534 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 TBC1D3CQ6IPX1 549 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 BPHLQ86WA6 291 aaPredicted RBP15.26■□□□□ 0.03
LIG1-206ENST00000594067 TBC1D3Q8IZP1 549 aaPredicted RBP15.26■□□□□ 0.03
LIG1-206ENST00000594067 COX18Q8N8Q8 333 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 CCL4L1Q8NHW4 92 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 NT5CQ8TCD5 201 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 GRHL3Q8TE85 626 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 KCTD12Q96CX2 325 aaKnown RBP15.26■□□□□ 0.03
LIG1-206ENST00000594067 OR51J1Q9H342 316 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 ZNF624Q9P2J8 865 aaPredicted RBP15.26■□□□□ 0.03
LIG1-206ENST00000594067 KLF15Q9UIH9 416 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 HEBP2Q9Y5Z4 205 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 SCN2AQ99250 2005 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 TEX13CA0A0J9YWL9 993 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 PRSS38A1L453 326 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 OR5K3A6NET4 321 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 HYAL3O43820 417 aaPredicted RBP15.26■□□□□ 0.03
LIG1-206ENST00000594067 B3GALT2O43825 422 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 STX11O75558 287 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 RCBTB2O95199 551 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 DBIP07108 87 aaKnown RBP15.26■□□□□ 0.03
LIG1-206ENST00000594067 SYPP08247 313 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 UBL4AP11441 157 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 NID1P14543 1247 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 ZNF250P15622 560 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 TLX1P31314 330 aaPredicted RBP15.26■□□□□ 0.03
LIG1-206ENST00000594067 RNASE12Q5GAN4 147 aaKnown RBP15.26■□□□□ 0.03
LIG1-206ENST00000594067 ZNF776Q68DI1 518 aaPredicted RBP15.26■□□□□ 0.03
LIG1-206ENST00000594067 USP53Q70EK8 1073 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 RNF113BQ8IZP6 322 aaKnown RBP15.26■□□□□ 0.03
LIG1-206ENST00000594067 OR13C5Q8NGS8 318 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 TRMT10AQ8TBZ6 339 aaKnown RBP15.26■□□□□ 0.03
LIG1-206ENST00000594067 OR2M4Q96R27 311 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 SERINC2Q96SA4 455 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 DPAGT1Q9H3H5 408 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 CAPN10Q9HC96 672 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 USP36Q9P275 1121 aaKnown RBP15.26■□□□□ 0.03
LIG1-206ENST00000594067 C19orf53Q9UNZ5 99 aaPredicted RBP15.26■□□□□ 0.03
LIG1-206ENST00000594067 CA5BQ9Y2D0 317 aa15.26■□□□□ 0.03
LIG1-206ENST00000594067 MRPS2Q9Y399 296 aaKnown RBP15.26■□□□□ 0.03
LIG1-206ENST00000594067 KIAA0100Q14667 2235 aaKnown RBP15.25■□□□□ 0.03
LIG1-206ENST00000594067 CIB4A0PJX0 185 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 CDHR4A6H8M9 788 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 POM121BA6NF01 834 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 SLC9B1P1A6NJY1 282 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 SLC22A31A6NKX4 558 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 SOX30O94993 753 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 NT5EP21589 574 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 ZNF85Q03923 595 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 CRMP1Q14194 572 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 EXOSC7Q15024 291 aaKnown RBP15.25■□□□□ 0.03
LIG1-206ENST00000594067 GARNL3Q5VVW2 1013 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 PRSS41Q7RTY9 318 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 SAMD14Q8IZD0 417 aaPredicted RBP15.25■□□□□ 0.03
LIG1-206ENST00000594067 CDK20Q8IZL9 346 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 LRRC20Q8TCA0 184 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 OMA1Q96E52 524 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 OR2A5Q96R48 311 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 ERVMER34-1Q9H9K5 563 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 SIGLEC7Q9Y286 467 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 LOC105369274A0A096LPK9 316 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 A0A0G2JK05 382 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 A0A1W2PPK0 400 aa15.25■□□□□ 0.03
LIG1-206ENST00000594067 PLPP2O43688 288 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms