RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 AGAP5A6NIR3 686 aa18■□□□□ 0.47
CIRBP-239ENST00000592467 RFXANKO14593 260 aa18■□□□□ 0.47
CIRBP-239ENST00000592467 DIAPH2O60879 1101 aa18■□□□□ 0.47
CIRBP-239ENST00000592467 CYP7B1O75881 506 aa18■□□□□ 0.47
CIRBP-239ENST00000592467 POU2F1P14859 743 aa18■□□□□ 0.47
CIRBP-239ENST00000592467 AGTR1P30556 359 aa18■□□□□ 0.47
CIRBP-239ENST00000592467 CCR4P51679 360 aa18■□□□□ 0.47
CIRBP-239ENST00000592467 KCNJ10P78508 379 aa18■□□□□ 0.47
CIRBP-239ENST00000592467 TIGD2Q4W5G0 525 aa18■□□□□ 0.47
CIRBP-239ENST00000592467 GPAT3Q53EU6 434 aa18■□□□□ 0.47
CIRBP-239ENST00000592467 PPP4R4Q6NUP7 873 aa18■□□□□ 0.47
CIRBP-239ENST00000592467 LRRC74BQ6ZQY2 392 aa18■□□□□ 0.47
CIRBP-239ENST00000592467 MSANTD1Q6ZTZ1 278 aa18■□□□□ 0.47
CIRBP-239ENST00000592467 PLEKHM3Q6ZWE6 761 aa18■□□□□ 0.47
CIRBP-239ENST00000592467 ABHD3Q8WU67 409 aa18■□□□□ 0.47
CIRBP-239ENST00000592467 CPNE4Q96A23 557 aaPredicted RBP18■□□□□ 0.47
CIRBP-239ENST00000592467 EBF4Q9BQW3 602 aa18■□□□□ 0.47
CIRBP-239ENST00000592467 CXXC4Q9H2H0 198 aa18■□□□□ 0.47
CIRBP-239ENST00000592467 EXOSC3Q9NQT5 275 aaKnown RBP18■□□□□ 0.47
CIRBP-239ENST00000592467 LIPT1Q9Y234 373 aa18■□□□□ 0.47
CIRBP-239ENST00000592467 EMC9Q9Y3B6 208 aa18■□□□□ 0.47
CIRBP-239ENST00000592467 PRRC2AP48634 2157 aaKnown RBP18■□□□□ 0.47
CIRBP-239ENST00000592467 A0A1W2PNR3 127 aa17.99■□□□□ 0.47
CIRBP-239ENST00000592467 GJE1A6NN92 205 aa17.99■□□□□ 0.47
CIRBP-239ENST00000592467 DEFB108AA8MXU0 73 aa17.99■□□□□ 0.47
CIRBP-239ENST00000592467 TGDSO95455 350 aa17.99■□□□□ 0.47
CIRBP-239ENST00000592467 KLK2P20151 261 aa17.99■□□□□ 0.47
CIRBP-239ENST00000592467 IDH3AP50213 366 aa17.99■□□□□ 0.47
CIRBP-239ENST00000592467 POLR2JP52435 117 aaKnown RBP17.99■□□□□ 0.47
CIRBP-239ENST00000592467 DNAJC14Q6Y2X3 702 aaPredicted RBP17.99■□□□□ 0.47
CIRBP-239ENST00000592467 LSRQ86X29 649 aaPredicted RBP17.99■□□□□ 0.47
CIRBP-239ENST00000592467 FUNDC1Q8IVP5 155 aa17.99■□□□□ 0.47
CIRBP-239ENST00000592467 ATP6V1C2Q8NEY4 427 aa17.99■□□□□ 0.47
CIRBP-239ENST00000592467 CNOT9Q92600 299 aaKnown RBP17.99■□□□□ 0.47
CIRBP-239ENST00000592467 VPS33AQ96AX1 596 aa17.99■□□□□ 0.47
CIRBP-239ENST00000592467 SLC39A3Q9BRY0 314 aa17.99■□□□□ 0.47
CIRBP-239ENST00000592467 CCDC106Q9BWC9 280 aa17.99■□□□□ 0.47
CIRBP-239ENST00000592467 SLC52A3Q9NQ40 469 aa17.99■□□□□ 0.47
CIRBP-239ENST00000592467 CCM2LQ9NUG4 571 aaPredicted RBP17.99■□□□□ 0.47
CIRBP-239ENST00000592467 KLHL28Q9NXS3 571 aa17.99■□□□□ 0.47
CIRBP-239ENST00000592467 NDRG3Q9UGV2 375 aa17.99■□□□□ 0.47
CIRBP-239ENST00000592467 VPS13CQ709C8 3753 aa17.99■□□□□ 0.47
CIRBP-239ENST00000592467 DSPPQ9NZW4 1301 aa17.98■□□□□ 0.47
CIRBP-239ENST00000592467 FAM234BA2RU67 622 aa17.98■□□□□ 0.47
CIRBP-239ENST00000592467 C16orf97H3BN30 126 aa17.98■□□□□ 0.47
CIRBP-239ENST00000592467 PLGP00747 810 aaPredicted RBP17.98■□□□□ 0.47
CIRBP-239ENST00000592467 PGCP20142 388 aa17.98■□□□□ 0.47
CIRBP-239ENST00000592467 ENPP1P22413 925 aa17.98■□□□□ 0.47
CIRBP-239ENST00000592467 LOXP28300 417 aaPredicted RBP17.98■□□□□ 0.47
CIRBP-239ENST00000592467 MAGEA8P43361 318 aa17.98■□□□□ 0.47
CIRBP-239ENST00000592467 CTBP2P56545 445 aa17.98■□□□□ 0.47
CIRBP-239ENST00000592467 RAC3P60763 192 aa17.98■□□□□ 0.47
CIRBP-239ENST00000592467 POU4F3Q15319 338 aa17.98■□□□□ 0.47
CIRBP-239ENST00000592467 C3orf33Q6P1S2 294 aa17.98■□□□□ 0.47
CIRBP-239ENST00000592467 PAMR1Q6UXH9 720 aa17.98■□□□□ 0.47
CIRBP-239ENST00000592467 STAC2Q6ZMT1 411 aa17.98■□□□□ 0.47
CIRBP-239ENST00000592467 ZNF550Q7Z398 422 aa17.98■□□□□ 0.47
CIRBP-239ENST00000592467 MIER2Q8N344 545 aa17.98■□□□□ 0.47
CIRBP-239ENST00000592467 LRRC8CQ8TDW0 803 aa17.98■□□□□ 0.47
CIRBP-239ENST00000592467 GTF2H4Q92759 462 aa17.98■□□□□ 0.47
CIRBP-239ENST00000592467 AURKBQ96GD4 344 aaPredicted RBP17.98■□□□□ 0.47
CIRBP-239ENST00000592467 PAIP1Q9H074 479 aaKnown RBP17.98■□□□□ 0.47
CIRBP-239ENST00000592467 VIPAS39Q9H9C1 493 aa17.98■□□□□ 0.47
CIRBP-239ENST00000592467 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.98■□□□□ 0.47
CIRBP-239ENST00000592467 PLEKHA6Q9Y2H5 1048 aa17.98■□□□□ 0.47
CIRBP-239ENST00000592467 MED13LQ71F56 2210 aa17.98■□□□□ 0.47
CIRBP-239ENST00000592467 RAI1Q7Z5J4 1906 aaPredicted RBP17.98■□□□□ 0.47
CIRBP-239ENST00000592467 AP3D1O14617 1153 aa17.97■□□□□ 0.47
CIRBP-239ENST00000592467 SMAD9O15198 467 aaKnown RBP17.97■□□□□ 0.47
CIRBP-239ENST00000592467 KRT75O95678 551 aa17.97■□□□□ 0.47
CIRBP-239ENST00000592467 THBDP07204 575 aa17.97■□□□□ 0.47
CIRBP-239ENST00000592467 ETFAP13804 333 aa17.97■□□□□ 0.47
CIRBP-239ENST00000592467 CD1EP15812 388 aa17.97■□□□□ 0.47
CIRBP-239ENST00000592467 CRYGSP22914 178 aa17.97■□□□□ 0.47
CIRBP-239ENST00000592467 ART1P52961 327 aa17.97■□□□□ 0.47
CIRBP-239ENST00000592467 FCRLAQ7L513 359 aa17.97■□□□□ 0.47
CIRBP-239ENST00000592467 HDXQ7Z353 690 aa17.97■□□□□ 0.47
CIRBP-239ENST00000592467 NUFIP2Q7Z417 695 aaKnown RBP17.97■□□□□ 0.47
CIRBP-239ENST00000592467 TUSC5Q8IXB3 177 aa17.97■□□□□ 0.47
CIRBP-239ENST00000592467 FOXC2Q99958 501 aa17.97■□□□□ 0.47
CIRBP-239ENST00000592467 MTHFD2LQ9H903 347 aaPredicted RBP17.97■□□□□ 0.47
CIRBP-239ENST00000592467 TPT1P8Q9HAU6 139 aa17.97■□□□□ 0.47
CIRBP-239ENST00000592467 GP6Q9HCN6 339 aa17.97■□□□□ 0.47
CIRBP-239ENST00000592467 TIGARQ9NQ88 270 aa17.97■□□□□ 0.47
CIRBP-239ENST00000592467 TCF7L2Q9NQB0 619 aa17.97■□□□□ 0.47
CIRBP-239ENST00000592467 C6orf203Q9P0P8 240 aaPredicted RBP17.97■□□□□ 0.47
CIRBP-239ENST00000592467 KLHL13Q9P2N7 655 aa17.97■□□□□ 0.47
CIRBP-239ENST00000592467 ITPR3Q14573 2671 aa17.97■□□□□ 0.47
CIRBP-239ENST00000592467 PRR14LQ5THK1 2151 aa17.96■□□□□ 0.47
CIRBP-239ENST00000592467 IGHV3-15A0A0B4J1V0 119 aa17.96■□□□□ 0.47
CIRBP-239ENST00000592467 HMGB1P1B2RPK0 211 aaPredicted RBP17.96■□□□□ 0.47
CIRBP-239ENST00000592467 SASH3O75995 380 aa17.96■□□□□ 0.47
CIRBP-239ENST00000592467 ATE1O95260 518 aa17.96■□□□□ 0.47
CIRBP-239ENST00000592467 TFPTP0C1Z6 253 aa17.96■□□□□ 0.47
CIRBP-239ENST00000592467 KCNJ5P48544 419 aa17.96■□□□□ 0.47
CIRBP-239ENST00000592467 ANXA11P50995 505 aaKnown RBP17.96■□□□□ 0.47
CIRBP-239ENST00000592467 HPCAP84074 193 aa17.96■□□□□ 0.47
CIRBP-239ENST00000592467 MERTKQ12866 999 aa17.96■□□□□ 0.47
CIRBP-239ENST00000592467 RNPS1Q15287 305 aaKnown RBP17.96■□□□□ 0.47
CIRBP-239ENST00000592467 EXOC3L2Q2M3D2 409 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms