RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 TOR1AIP2Q8NFQ8 470 aa17.24■□□□□ 0.35
PRKCSH-216ENST00000592445 APH1AQ96BI3 265 aa17.24■□□□□ 0.35
PRKCSH-216ENST00000592445 STACQ99469 402 aa17.24■□□□□ 0.35
PRKCSH-216ENST00000592445 TRMOQ9BU70 441 aa17.24■□□□□ 0.35
PRKCSH-216ENST00000592445 ANKZF1Q9H8Y5 726 aa17.24■□□□□ 0.35
PRKCSH-216ENST00000592445 DUSP22Q9NRW4 184 aa17.24■□□□□ 0.35
PRKCSH-216ENST00000592445 ACSS1Q9NUB1 689 aaPredicted RBP17.24■□□□□ 0.35
PRKCSH-216ENST00000592445 ZCCHC3Q9NUD5 404 aaKnown RBP17.24■□□□□ 0.35
PRKCSH-216ENST00000592445 NOSIPQ9Y314 301 aaKnown RBP17.24■□□□□ 0.35
PRKCSH-216ENST00000592445 VWC2LB2RUY7 222 aa17.23■□□□□ 0.35
PRKCSH-216ENST00000592445 HMGN2P05204 90 aaKnown RBP17.23■□□□□ 0.35
PRKCSH-216ENST00000592445 EFNA1P20827 205 aaPredicted RBP17.23■□□□□ 0.35
PRKCSH-216ENST00000592445 APOBEC3AP31941 199 aaPredicted RBP17.23■□□□□ 0.35
PRKCSH-216ENST00000592445 CBFBQ13951 182 aa17.23■□□□□ 0.35
PRKCSH-216ENST00000592445 LASP1Q14847 261 aaKnown RBP17.23■□□□□ 0.35
PRKCSH-216ENST00000592445 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.23■□□□□ 0.35
PRKCSH-216ENST00000592445 RFLNBQ8N5W9 214 aa17.23■□□□□ 0.35
PRKCSH-216ENST00000592445 OR5W2Q8NH69 310 aa17.23■□□□□ 0.35
PRKCSH-216ENST00000592445 ZNF764Q96H86 408 aaPredicted RBP17.23■□□□□ 0.35
PRKCSH-216ENST00000592445 METTL2AQ96IZ6 378 aaKnown RBP17.23■□□□□ 0.35
PRKCSH-216ENST00000592445 TSSK3Q96PN8 268 aa17.23■□□□□ 0.35
PRKCSH-216ENST00000592445 C12orf65Q9H3J6 166 aaKnown RBP17.23■□□□□ 0.35
PRKCSH-216ENST00000592445 PIGUQ9H490 435 aa17.23■□□□□ 0.35
PRKCSH-216ENST00000592445 ASB6Q9NWX5 421 aa17.23■□□□□ 0.35
PRKCSH-216ENST00000592445 TRAF6Q9Y4K3 522 aa17.23■□□□□ 0.35
PRKCSH-216ENST00000592445 H6PDO95479 791 aa17.22■□□□□ 0.35
PRKCSH-216ENST00000592445 FRKP42685 505 aaPredicted RBP17.22■□□□□ 0.35
PRKCSH-216ENST00000592445 DIO1P49895 249 aa17.22■□□□□ 0.35
PRKCSH-216ENST00000592445 CSNK2A1P68400 391 aaPredicted RBP17.22■□□□□ 0.35
PRKCSH-216ENST00000592445 KIAA0040Q15053 153 aa17.22■□□□□ 0.35
PRKCSH-216ENST00000592445 CR1LQ2VPA4 569 aa17.22■□□□□ 0.35
PRKCSH-216ENST00000592445 TIGD2Q4W5G0 525 aa17.22■□□□□ 0.35
PRKCSH-216ENST00000592445 SLC25A53Q5H9E4 307 aa17.22■□□□□ 0.35
PRKCSH-216ENST00000592445 OR7E24Q6IFN5 339 aa17.22■□□□□ 0.35
PRKCSH-216ENST00000592445 C12orf54Q6X4T0 127 aa17.22■□□□□ 0.35
PRKCSH-216ENST00000592445 CLHC1Q8NHS4 586 aa17.22■□□□□ 0.35
PRKCSH-216ENST00000592445 ZNF524Q96C55 264 aa17.22■□□□□ 0.35
PRKCSH-216ENST00000592445 FBXO17Q96EF6 278 aa17.22■□□□□ 0.35
PRKCSH-216ENST00000592445 FAM120BQ96EK7 910 aaKnown RBP17.22■□□□□ 0.35
PRKCSH-216ENST00000592445 PLA2G12AQ9BZM1 189 aa17.22■□□□□ 0.35
PRKCSH-216ENST00000592445 TSPYL1Q9H0U9 437 aa17.22■□□□□ 0.35
PRKCSH-216ENST00000592445 SERINC1Q9NRX5 453 aa17.22■□□□□ 0.35
PRKCSH-216ENST00000592445 C1orf109Q9NX04 203 aa17.22■□□□□ 0.35
PRKCSH-216ENST00000592445 TAS2R16Q9NYV7 291 aa17.22■□□□□ 0.35
PRKCSH-216ENST00000592445 A0A087WUV0 522 aaPredicted RBP17.21■□□□□ 0.35
PRKCSH-216ENST00000592445 IGHV4-61A0A0C4DH41 118 aa17.21■□□□□ 0.35
PRKCSH-216ENST00000592445 EXOC1LA0A1B0GW35 172 aa17.21■□□□□ 0.35
PRKCSH-216ENST00000592445 H3BQF6 201 aa17.21■□□□□ 0.35
PRKCSH-216ENST00000592445 SULT2B1O00204 365 aa17.21■□□□□ 0.35
PRKCSH-216ENST00000592445 ZNF264O43296 627 aa17.21■□□□□ 0.35
PRKCSH-216ENST00000592445 TBX19O60806 448 aa17.21■□□□□ 0.35
PRKCSH-216ENST00000592445 ATP12AP54707 1039 aa17.21■□□□□ 0.35
PRKCSH-216ENST00000592445 PHC1P78364 1004 aa17.21■□□□□ 0.35
PRKCSH-216ENST00000592445 GABRA6Q16445 453 aa17.21■□□□□ 0.35
PRKCSH-216ENST00000592445 EXOSC6Q5RKV6 272 aaKnown RBP17.21■□□□□ 0.35
PRKCSH-216ENST00000592445 DCST2Q5T1A1 773 aa17.21■□□□□ 0.35
PRKCSH-216ENST00000592445 TIFABQ6ZNK6 161 aa17.21■□□□□ 0.35
PRKCSH-216ENST00000592445 TMPPEQ6ZT21 453 aa17.21■□□□□ 0.35
PRKCSH-216ENST00000592445 C1orf159Q96HA4 380 aa17.21■□□□□ 0.35
PRKCSH-216ENST00000592445 MUS81Q96NY9 551 aa17.21■□□□□ 0.35
PRKCSH-216ENST00000592445 FOXN4Q96NZ1 517 aa17.21■□□□□ 0.35
PRKCSH-216ENST00000592445 CCT7Q99832 543 aa17.21■□□□□ 0.35
PRKCSH-216ENST00000592445 QRSL1Q9H0R6 528 aaKnown RBP17.21■□□□□ 0.35
PRKCSH-216ENST00000592445 DTNAQ9Y4J8 743 aa17.21■□□□□ 0.35
PRKCSH-216ENST00000592445 IGKV3D-15A0A087WSY6 115 aa17.2■□□□□ 0.34
PRKCSH-216ENST00000592445 LOC390937A0A1W2PQ73 354 aa17.2■□□□□ 0.34
PRKCSH-216ENST00000592445 NPIPB8E9PQR5 432 aa17.2■□□□□ 0.34
PRKCSH-216ENST00000592445 SLC28A1O00337 649 aa17.2■□□□□ 0.34
PRKCSH-216ENST00000592445 SPRY1O43609 319 aaPredicted RBP17.2■□□□□ 0.34
PRKCSH-216ENST00000592445 EIF4E2O60573 245 aaKnown RBP17.2■□□□□ 0.34
PRKCSH-216ENST00000592445 CYP7B1O75881 506 aa17.2■□□□□ 0.34
PRKCSH-216ENST00000592445 UBL4AP11441 157 aa17.2■□□□□ 0.34
PRKCSH-216ENST00000592445 SDC1P18827 310 aa17.2■□□□□ 0.34
PRKCSH-216ENST00000592445 CASQ1P31415 396 aa17.2■□□□□ 0.34
PRKCSH-216ENST00000592445 MLC1Q15049 377 aa17.2■□□□□ 0.34
PRKCSH-216ENST00000592445 PDK3Q15120 406 aa17.2■□□□□ 0.34
PRKCSH-216ENST00000592445 ABLIM2Q6H8Q1 611 aa17.2■□□□□ 0.34
PRKCSH-216ENST00000592445 MTDHQ86UE4 582 aaKnown RBP17.2■□□□□ 0.34
PRKCSH-216ENST00000592445 ADAMTS15Q8TE58 950 aa17.2■□□□□ 0.34
PRKCSH-216ENST00000592445 CCDC126Q96EE4 140 aa17.2■□□□□ 0.34
PRKCSH-216ENST00000592445 ZHX1-C8orf76Q96EF9 292 aa17.2■□□□□ 0.34
PRKCSH-216ENST00000592445 SORCS2Q96PQ0 1159 aa17.2■□□□□ 0.34
PRKCSH-216ENST00000592445 BAIAP2L1Q9UHR4 511 aa17.2■□□□□ 0.34
PRKCSH-216ENST00000592445 FAF1Q9UNN5 650 aaPredicted RBP17.2■□□□□ 0.34
PRKCSH-216ENST00000592445 CCL27Q9Y4X3 112 aa17.2■□□□□ 0.34
PRKCSH-216ENST00000592445 ETV2O00321 342 aaPredicted RBP17.19■□□□□ 0.34
PRKCSH-216ENST00000592445 MRPL33O75394 65 aaKnown RBP17.19■□□□□ 0.34
PRKCSH-216ENST00000592445 TFPIP10646 304 aa17.19■□□□□ 0.34
PRKCSH-216ENST00000592445 UROSP10746 265 aa17.19■□□□□ 0.34
PRKCSH-216ENST00000592445 ITGA2P17301 1181 aa17.19■□□□□ 0.34
PRKCSH-216ENST00000592445 PRPH2P23942 346 aa17.19■□□□□ 0.34
PRKCSH-216ENST00000592445 SRP14P37108 136 aaKnown RBP17.19■□□□□ 0.34
PRKCSH-216ENST00000592445 SNRPD2P62316 118 aaKnown RBP17.19■□□□□ 0.34
PRKCSH-216ENST00000592445 MERTKQ12866 999 aa17.19■□□□□ 0.34
PRKCSH-216ENST00000592445 PDE7AQ13946 482 aa17.19■□□□□ 0.34
PRKCSH-216ENST00000592445 CFAP157Q5JU67 520 aa17.19■□□□□ 0.34
PRKCSH-216ENST00000592445 MEX3DQ86XN8 651 aaKnown RBP17.19■□□□□ 0.34
PRKCSH-216ENST00000592445 VRK1Q99986 396 aaPredicted RBP17.19■□□□□ 0.34
PRKCSH-216ENST00000592445 THUMPD3Q9BV44 507 aaKnown RBP17.19■□□□□ 0.34
PRKCSH-216ENST00000592445 ACTRT3Q9BYD9 372 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms