RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 ATP4BP51164 291 aa24.37■■□□□ 1.49
SMAD4-213ENST00000591914 SESN3P58005 492 aa24.37■■□□□ 1.49
SMAD4-213ENST00000591914 DAZAP2Q15038 168 aaPredicted RBP24.37■■□□□ 1.49
SMAD4-213ENST00000591914 ZNF239Q16600 458 aaKnown RBP24.37■■□□□ 1.49
SMAD4-213ENST00000591914 ZNF474Q6S9Z5 364 aaPredicted RBP24.37■■□□□ 1.49
SMAD4-213ENST00000591914 LINC01560Q8TB33 94 aa24.37■■□□□ 1.49
SMAD4-213ENST00000591914 TMEM234Q8WY98 164 aa24.37■■□□□ 1.49
SMAD4-213ENST00000591914 CPNE4Q96A23 557 aaPredicted RBP24.37■■□□□ 1.49
SMAD4-213ENST00000591914 COQ10BQ9H8M1 238 aa24.37■■□□□ 1.49
SMAD4-213ENST00000591914 SLC52A3Q9NQ40 469 aa24.37■■□□□ 1.49
SMAD4-213ENST00000591914 TIGARQ9NQ88 270 aa24.37■■□□□ 1.49
SMAD4-213ENST00000591914 GLRX2Q9NS18 164 aa24.37■■□□□ 1.49
SMAD4-213ENST00000591914 ACER3Q9NUN7 267 aa24.37■■□□□ 1.49
SMAD4-213ENST00000591914 ZNF446Q9NWS9 450 aa24.37■■□□□ 1.49
SMAD4-213ENST00000591914 PCDHB14Q9Y5E9 798 aa24.37■■□□□ 1.49
SMAD4-213ENST00000591914 ANKRD17O75179 2603 aaKnown RBP24.37■■□□□ 1.49
SMAD4-213ENST00000591914 A6NNC1 897 aa24.36■■□□□ 1.49
SMAD4-213ENST00000591914 C3orf33Q6P1S2 294 aa24.36■■□□□ 1.49
SMAD4-213ENST00000591914 ATP6V1C2Q8NEY4 427 aa24.36■■□□□ 1.49
SMAD4-213ENST00000591914 SRXN1Q9BYN0 137 aa24.36■■□□□ 1.49
SMAD4-213ENST00000591914 CCDC167Q9P0B6 97 aa24.36■■□□□ 1.49
SMAD4-213ENST00000591914 EMC9Q9Y3B6 208 aa24.36■■□□□ 1.49
SMAD4-213ENST00000591914 DSPPQ9NZW4 1301 aa24.35■■□□□ 1.49
SMAD4-213ENST00000591914 MPDZO75970 2070 aa24.35■■□□□ 1.49
SMAD4-213ENST00000591914 A0A096LPI6 279 aa24.35■■□□□ 1.49
SMAD4-213ENST00000591914 ENO4A6NNW6 628 aa24.35■■□□□ 1.49
SMAD4-213ENST00000591914 EDF1O60869 148 aaKnown RBP24.35■■□□□ 1.49
SMAD4-213ENST00000591914 PLGP00747 810 aaPredicted RBP24.35■■□□□ 1.49
SMAD4-213ENST00000591914 TFPTP0C1Z6 253 aa24.35■■□□□ 1.49
SMAD4-213ENST00000591914 DSTNP60981 165 aa24.35■■□□□ 1.49
SMAD4-213ENST00000591914 PLEKHM3Q6ZWE6 761 aa24.35■■□□□ 1.49
SMAD4-213ENST00000591914 CDH24Q86UP0 819 aa24.35■■□□□ 1.49
SMAD4-213ENST00000591914 LURAP1LQ8IV03 231 aa24.35■■□□□ 1.49
SMAD4-213ENST00000591914 ARFGAP2Q8N6H7 521 aa24.35■■□□□ 1.49
SMAD4-213ENST00000591914 OR6K3Q8NGY3 331 aa24.35■■□□□ 1.49
SMAD4-213ENST00000591914 RNF128Q8TEB7 428 aa24.35■■□□□ 1.49
SMAD4-213ENST00000591914 SLC38A5Q8WUX1 472 aa24.35■■□□□ 1.49
SMAD4-213ENST00000591914 CNOT9Q92600 299 aaKnown RBP24.35■■□□□ 1.49
SMAD4-213ENST00000591914 SPDL1Q96EA4 605 aa24.35■■□□□ 1.49
SMAD4-213ENST00000591914 GPATCH1Q9BRR8 931 aaKnown RBP24.35■■□□□ 1.49
SMAD4-213ENST00000591914 RASSF1Q9NS23 344 aa24.35■■□□□ 1.49
SMAD4-213ENST00000591914 THUMPD1Q9NXG2 353 aaKnown RBP24.35■■□□□ 1.49
SMAD4-213ENST00000591914 DNAJB12Q9NXW2 375 aaKnown RBP24.35■■□□□ 1.49
SMAD4-213ENST00000591914 CLEC4AQ9UMR7 237 aa24.35■■□□□ 1.49
SMAD4-213ENST00000591914 PROCRQ9UNN8 238 aa24.35■■□□□ 1.49
SMAD4-213ENST00000591914 NR5A2O00482 541 aa24.34■■□□□ 1.49
SMAD4-213ENST00000591914 ADAM11O75078 769 aa24.34■■□□□ 1.49
SMAD4-213ENST00000591914 DBIP07108 87 aaKnown RBP24.34■■□□□ 1.49
SMAD4-213ENST00000591914 SLC7A1P30825 629 aa24.34■■□□□ 1.49
SMAD4-213ENST00000591914 CD79BP40259 229 aa24.34■■□□□ 1.49
SMAD4-213ENST00000591914 FAM27E3Q08E93 113 aa24.34■■□□□ 1.49
SMAD4-213ENST00000591914 MERTKQ12866 999 aa24.34■■□□□ 1.49
SMAD4-213ENST00000591914 SQLEQ14534 574 aa24.34■■□□□ 1.49
SMAD4-213ENST00000591914 LRIF1Q5T3J3 769 aa24.34■■□□□ 1.49
SMAD4-213ENST00000591914 ZNF610Q8N9Z0 462 aa24.34■■□□□ 1.49
SMAD4-213ENST00000591914 WDR60Q8WVS4 1066 aa24.34■■□□□ 1.49
SMAD4-213ENST00000591914 ROBO4Q8WZ75 1007 aa24.34■■□□□ 1.49
SMAD4-213ENST00000591914 DACH2Q96NX9 599 aa24.34■■□□□ 1.49
SMAD4-213ENST00000591914 PLSCR4Q9NRQ2 329 aa24.34■■□□□ 1.49
SMAD4-213ENST00000591914 ELOVL5Q9NYP7 299 aa24.34■■□□□ 1.49
SMAD4-213ENST00000591914 CALML5Q9NZT1 146 aa24.34■■□□□ 1.49
SMAD4-213ENST00000591914 HRNRQ86YZ3 2850 aaPredicted RBP24.34■■□□□ 1.49
SMAD4-213ENST00000591914 AKAP9Q99996 3911 aa24.34■■□□□ 1.49
SMAD4-213ENST00000591914 CLIC1O00299 241 aa24.33■■□□□ 1.49
SMAD4-213ENST00000591914 BCHEP06276 602 aa24.33■■□□□ 1.49
SMAD4-213ENST00000591914 PABPC4LP0CB38 370 aaKnown RBP24.33■■□□□ 1.49
SMAD4-213ENST00000591914 IL7RP16871 459 aa24.33■■□□□ 1.49
SMAD4-213ENST00000591914 RYKP34925 604 aa24.33■■□□□ 1.49
SMAD4-213ENST00000591914 CRISP3P54108 245 aa24.33■■□□□ 1.49
SMAD4-213ENST00000591914 CTBP2P56545 445 aa24.33■■□□□ 1.49
SMAD4-213ENST00000591914 GNA13Q14344 377 aa24.33■■□□□ 1.49
SMAD4-213ENST00000591914 RGNQ15493 299 aa24.33■■□□□ 1.49
SMAD4-213ENST00000591914 GTF2IRD2BQ6EKJ0 949 aa24.33■■□□□ 1.49
SMAD4-213ENST00000591914 GTF2IRD2Q86UP8 949 aa24.33■■□□□ 1.49
SMAD4-213ENST00000591914 PEX5LQ8IYB4 626 aa24.33■■□□□ 1.49
SMAD4-213ENST00000591914 ZNF563Q8TA94 476 aa24.33■■□□□ 1.49
SMAD4-213ENST00000591914 THOC1Q96FV9 657 aaKnown RBP24.33■■□□□ 1.49
SMAD4-213ENST00000591914 SLC39A3Q9BRY0 314 aa24.33■■□□□ 1.49
SMAD4-213ENST00000591914 CCDC106Q9BWC9 280 aa24.33■■□□□ 1.49
SMAD4-213ENST00000591914 POLDIP3Q9BY77 421 aaKnown RBP24.33■■□□□ 1.49
SMAD4-213ENST00000591914 SERINC1Q9NRX5 453 aa24.33■■□□□ 1.49
SMAD4-213ENST00000591914 SLC25A37Q9NYZ2 338 aa24.33■■□□□ 1.49
SMAD4-213ENST00000591914 SPG11Q96JI7 2443 aa24.33■■□□□ 1.48
SMAD4-213ENST00000591914 CCDC168Q8NDH2 2452 aa24.32■■□□□ 1.48
SMAD4-213ENST00000591914 SH3D21A4FU49 640 aa24.32■■□□□ 1.48
SMAD4-213ENST00000591914 BMP2P12643 396 aa24.32■■□□□ 1.48
SMAD4-213ENST00000591914 APOBEC1P41238 236 aaKnown RBP24.32■■□□□ 1.48
SMAD4-213ENST00000591914 RAC3P60763 192 aa24.32■■□□□ 1.48
SMAD4-213ENST00000591914 RNPS1Q15287 305 aaKnown RBP24.32■■□□□ 1.48
SMAD4-213ENST00000591914 AGKQ53H12 422 aa24.32■■□□□ 1.48
SMAD4-213ENST00000591914 MRPL2Q5T653 305 aaKnown RBP24.32■■□□□ 1.48
SMAD4-213ENST00000591914 MSRB3Q8IXL7 192 aa24.32■■□□□ 1.48
SMAD4-213ENST00000591914 ABHD3Q8WU67 409 aa24.32■■□□□ 1.48
SMAD4-213ENST00000591914 SLC25A43Q8WUT9 341 aaPredicted RBP24.32■■□□□ 1.48
SMAD4-213ENST00000591914 REXO5Q96IC2 774 aaKnown RBP24.32■■□□□ 1.48
SMAD4-213ENST00000591914 SIKE1Q9BRV8 207 aa24.32■■□□□ 1.48
SMAD4-213ENST00000591914 CLEC4MQ9H2X3 399 aaPredicted RBP24.32■■□□□ 1.48
SMAD4-213ENST00000591914 RAD21L1Q9H4I0 556 aa24.32■■□□□ 1.48
SMAD4-213ENST00000591914 NPHS2Q9NP85 383 aa24.32■■□□□ 1.48
SMAD4-213ENST00000591914 A0A1W2PNR3 127 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms