RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 FAM71CQ8NEG0 241 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 TOR1AIP2Q8NFQ8 470 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 GPR119Q8TDV5 335 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 ZFP90Q8TF47 636 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 XAGE5Q8WWM1 108 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 FIG4Q92562 907 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 ARSGQ96EG1 525 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 ZNF845Q96IR2 970 aaPredicted RBP10.07□□□□□ -0.8
SMAD4-211ENST00000590499 RNF145Q96MT1 663 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 SFXN3Q9BWM7 321 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 L3MBTL1Q9Y468 752 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 ZNF175Q9Y473 711 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 WDR45Q9Y484 360 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 SLC22A20A6NK97 555 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 ADAMDEC1O15204 470 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 ZNF264O43296 627 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 EFNA2O43921 213 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 BCAS1O75363 584 aaPredicted RBP10.06□□□□□ -0.8
SMAD4-211ENST00000590499 UBL4AP11441 157 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 ELK4P28324 431 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 SSTR2P30874 369 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 EIF1P41567 113 aaKnown RBP10.06□□□□□ -0.8
SMAD4-211ENST00000590499 MAGEA8P43361 318 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 AGFG1P52594 562 aaKnown RBP10.06□□□□□ -0.8
SMAD4-211ENST00000590499 FGFBP1Q14512 234 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 GUSBP1Q15486 140 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 MAPK11Q15759 364 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 GTDC1Q4AE62 458 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 SLC25A53Q5H9E4 307 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 ATAD3BQ5T9A4 648 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 DNAJC14Q6Y2X3 702 aaPredicted RBP10.06□□□□□ -0.8
SMAD4-211ENST00000590499 ZNF621Q6ZSS3 439 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 GCNT2Q8N0V5 402 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 ZNF619Q8N2I2 560 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 ZNF614Q8N883 585 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 ANKFN1Q8N957 763 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 OR5W2Q8NH69 310 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 FNDC9Q8TBE3 224 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 SMPDL3BQ92485 455 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 GTF2H4Q92759 462 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 RNASE6Q93091 150 aaKnown RBP10.06□□□□□ -0.8
SMAD4-211ENST00000590499 VPS33AQ96AX1 596 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 INTS12Q96CB8 462 aaKnown RBP10.06□□□□□ -0.8
SMAD4-211ENST00000590499 ZG16BQ96DA0 208 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 ITCHQ96J02 903 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 TRNT1Q96Q11 434 aaKnown RBP10.06□□□□□ -0.8
SMAD4-211ENST00000590499 PINK1Q9BXM7 581 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 KRTAP4-9Q9BYQ8 210 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 LAT2Q9GZY6 243 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 SLC38A1Q9H2H9 487 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 ACBD3Q9H3P7 528 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 RNF122Q9H9V4 155 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 SLC52A3Q9NQ40 469 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 KCNN3Q9UGI6 736 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 RNF114Q9Y508 228 aa10.06□□□□□ -0.8
SMAD4-211ENST00000590499 CELSR1Q9NYQ6 3014 aa10.05□□□□□ -0.8
SMAD4-211ENST00000590499 A0A0J9YW62 118 aa10.05□□□□□ -0.8
SMAD4-211ENST00000590499 A0A1W2PNV4 684 aa10.05□□□□□ -0.8
SMAD4-211ENST00000590499 GTPBP1O00178 669 aaKnown RBP10.05□□□□□ -0.8
SMAD4-211ENST00000590499 EDF1O60869 148 aaKnown RBP10.05□□□□□ -0.8
SMAD4-211ENST00000590499 AQP8O94778 261 aa10.05□□□□□ -0.8
SMAD4-211ENST00000590499 H6PDO95479 791 aa10.05□□□□□ -0.8
SMAD4-211ENST00000590499 KRT75O95678 551 aa10.05□□□□□ -0.8
SMAD4-211ENST00000590499 CRHP06850 196 aa10.05□□□□□ -0.8
SMAD4-211ENST00000590499 CHRM4P08173 479 aa10.05□□□□□ -0.8
SMAD4-211ENST00000590499 PRKCAP17252 672 aa10.05□□□□□ -0.8
SMAD4-211ENST00000590499 RPS4Y1P22090 263 aaKnown RBP10.05□□□□□ -0.8
SMAD4-211ENST00000590499 SHC1P29353 583 aa10.05□□□□□ -0.8
SMAD4-211ENST00000590499 PGM1P36871 562 aa10.05□□□□□ -0.8
SMAD4-211ENST00000590499 SLC6A8P48029 635 aa10.05□□□□□ -0.8
SMAD4-211ENST00000590499 ATP4BP51164 291 aa10.05□□□□□ -0.8
SMAD4-211ENST00000590499 RPS3AP61247 264 aaKnown RBP10.05□□□□□ -0.8
SMAD4-211ENST00000590499 CHRNEQ04844 493 aa10.05□□□□□ -0.8
SMAD4-211ENST00000590499 PON3Q15166 354 aa10.05□□□□□ -0.8
SMAD4-211ENST00000590499 SYPL1Q16563 259 aa10.05□□□□□ -0.8
SMAD4-211ENST00000590499 CHMP1BQ7LBR1 199 aa10.05□□□□□ -0.8
SMAD4-211ENST00000590499 OR10D3Q8NH80 312 aa10.05□□□□□ -0.8
SMAD4-211ENST00000590499 FBXO27Q8NI29 283 aa10.05□□□□□ -0.8
SMAD4-211ENST00000590499 PNPT1Q8TCS8 783 aaKnown RBP10.05□□□□□ -0.8
SMAD4-211ENST00000590499 MRGPRX4Q96LA9 322 aa10.05□□□□□ -0.8
SMAD4-211ENST00000590499 PAIP1Q9H074 479 aaKnown RBP10.05□□□□□ -0.8
SMAD4-211ENST00000590499 ZNF385DQ9H6B1 395 aa10.05□□□□□ -0.8
SMAD4-211ENST00000590499 TMEM185BQ9H7F4 350 aa10.05□□□□□ -0.8
SMAD4-211ENST00000590499 RMND5AQ9H871 391 aa10.05□□□□□ -0.8
SMAD4-211ENST00000590499 TPT1P8Q9HAU6 139 aa10.05□□□□□ -0.8
SMAD4-211ENST00000590499 TMEM45AQ9NWC5 275 aa10.05□□□□□ -0.8
SMAD4-211ENST00000590499 FOXD3Q9UJU5 478 aaPredicted RBP10.05□□□□□ -0.8
SMAD4-211ENST00000590499 LIPT1Q9Y234 373 aa10.05□□□□□ -0.8
SMAD4-211ENST00000590499 DSPPQ9NZW4 1301 aa10.05□□□□□ -0.8
SMAD4-211ENST00000590499 FREM1Q5H8C1 2179 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 AGAP5A6NIR3 686 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 EEF1E1-BLOC1S5C9J1V9 151 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 EIF1AYO14602 144 aaKnown RBP10.04□□□□□ -0.8
SMAD4-211ENST00000590499 EREGO14944 169 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 EEF1E1O43324 174 aaKnown RBP10.04□□□□□ -0.8
SMAD4-211ENST00000590499 ADAM11O75078 769 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 CSTAP01040 98 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 OPN1LWP04000 364 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 UBTFL6P0CB48 400 aaPredicted RBP10.04□□□□□ -0.8
SMAD4-211ENST00000590499 CD1EP15812 388 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms