RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 PAMR1Q6UXH9 720 aa9.49□□□□□ -0.89
CLPTM1-211ENST00000589347 DNAJC14Q6Y2X3 702 aaPredicted RBP9.49□□□□□ -0.89
CLPTM1-211ENST00000589347 FRRS1Q6ZNA5 592 aa9.49□□□□□ -0.89
CLPTM1-211ENST00000589347 ZNF621Q6ZSS3 439 aa9.49□□□□□ -0.89
CLPTM1-211ENST00000589347 HDXQ7Z353 690 aa9.49□□□□□ -0.89
CLPTM1-211ENST00000589347 BTLAQ7Z6A9 289 aa9.49□□□□□ -0.89
CLPTM1-211ENST00000589347 CDC20BQ86Y33 519 aa9.49□□□□□ -0.89
CLPTM1-211ENST00000589347 CMIPQ8IY22 773 aa9.49□□□□□ -0.89
CLPTM1-211ENST00000589347 MIER2Q8N344 545 aa9.49□□□□□ -0.89
CLPTM1-211ENST00000589347 ARFGAP2Q8N6H7 521 aa9.49□□□□□ -0.89
CLPTM1-211ENST00000589347 ATP6V1C2Q8NEY4 427 aa9.49□□□□□ -0.89
CLPTM1-211ENST00000589347 GPR119Q8TDV5 335 aa9.49□□□□□ -0.89
CLPTM1-211ENST00000589347 SLC25A43Q8WUT9 341 aaPredicted RBP9.49□□□□□ -0.89
CLPTM1-211ENST00000589347 WDR60Q8WVS4 1066 aa9.49□□□□□ -0.89
CLPTM1-211ENST00000589347 ZNF75CPQ92670 426 aaPredicted RBP9.49□□□□□ -0.89
CLPTM1-211ENST00000589347 PMM1Q92871 262 aa9.49□□□□□ -0.89
CLPTM1-211ENST00000589347 ITCHQ96J02 903 aa9.49□□□□□ -0.89
CLPTM1-211ENST00000589347 MARK4Q96L34 752 aa9.49□□□□□ -0.89
CLPTM1-211ENST00000589347 REPIN1Q9BWE0 567 aaKnown RBP9.49□□□□□ -0.89
CLPTM1-211ENST00000589347 RAD21L1Q9H4I0 556 aa9.49□□□□□ -0.89
CLPTM1-211ENST00000589347 GSX1Q9H4S2 264 aaPredicted RBP9.49□□□□□ -0.89
CLPTM1-211ENST00000589347 EXOSC3Q9NQT5 275 aaKnown RBP9.49□□□□□ -0.89
CLPTM1-211ENST00000589347 THUMPD1Q9NXG2 353 aaKnown RBP9.49□□□□□ -0.89
CLPTM1-211ENST00000589347 CALML5Q9NZT1 146 aa9.49□□□□□ -0.89
CLPTM1-211ENST00000589347 P2RX2Q9UBL9 471 aa9.49□□□□□ -0.89
CLPTM1-211ENST00000589347 ST6GALNAC2Q9UJ37 374 aa9.49□□□□□ -0.89
CLPTM1-211ENST00000589347 RAI1Q7Z5J4 1906 aaPredicted RBP9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 A0A0J9YW62 118 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 HMGB1P1B2RPK0 211 aaPredicted RBP9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 C16orf97H3BN30 126 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 ETV2O00321 342 aaPredicted RBP9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 HMGN4O00479 90 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 OIP5O43482 229 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 H6PDO95479 791 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 RAF1P04049 648 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 NR2F1P10589 423 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 FOSL1P15407 271 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 AGTR1P30556 359 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 UGT2B10P36537 528 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 CSNK2A1P68400 391 aaPredicted RBP9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 PHC1P78364 1004 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 IRX1P78414 480 aaPredicted RBP9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 EXOC3L2Q2M3D2 409 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 TMEM176BQ3YBM2 270 aaPredicted RBP9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 C6orf10Q5SRN2 563 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 LRRC74BQ6ZQY2 392 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 BEND4Q6ZU67 534 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 FCRLAQ7L513 359 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 SLC43A2Q8N370 569 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 RNF128Q8TEB7 428 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 OSTF1Q92882 214 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 RAB8BQ92930 207 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 ZHX1-C8orf76Q96EF9 292 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 TEX37Q96LM6 180 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 TRNT1Q96Q11 434 aaKnown RBP9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 OR5B2Q96R09 309 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 NPAS1Q99742 590 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 MDFIQ99750 246 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 THUMPD3Q9BV44 507 aaKnown RBP9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 SAP130Q9H0E3 1048 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 GP6Q9HCN6 339 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 TCF7L2Q9NQB0 619 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 SDR39U1Q9NRG7 319 aaPredicted RBP9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 KLHL9Q9P2J3 617 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 CLEC4AQ9UMR7 237 aa9.48□□□□□ -0.89
CLPTM1-211ENST00000589347 FAM234BA2RU67 622 aa9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 C9JVG2 144 aa9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 FCMRO60667 390 aa9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 PRKD3O94806 890 aa9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 NTN1O95631 604 aa9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 OPN1LWP04000 364 aa9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 DBIP07108 87 aaKnown RBP9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 IL11P20809 199 aa9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 FKBP2P26885 142 aaKnown RBP9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 IL12AP29459 219 aa9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 PGM1P36871 562 aa9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 APOBEC1P41238 236 aaKnown RBP9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 CDKN2CP42773 168 aa9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 HTR3AP46098 478 aa9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 POLR2JP52435 117 aaKnown RBP9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 IST1P53990 364 aa9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 CRISP3P54108 245 aa9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 RAC3P60763 192 aa9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 DSTNP60981 165 aa9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 FAM27E3Q08E93 113 aa9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 FUT5Q11128 374 aa9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 MERTKQ12866 999 aa9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 FOXD4Q12950 439 aaPredicted RBP9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 KEAP1Q14145 624 aa9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 TOMM34Q15785 309 aaPredicted RBP9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 TIGD2Q4W5G0 525 aa9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 LIN52Q52LA3 116 aa9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 ZNF474Q6S9Z5 364 aaPredicted RBP9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 PLEKHM3Q6ZWE6 761 aa9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 GRINAQ7Z429 371 aa9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 PEX5LQ8IYB4 626 aa9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 ZNF440Q8IYI8 595 aa9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 ZNF610Q8N9Z0 462 aa9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 FAM71CQ8NEG0 241 aa9.47□□□□□ -0.89
CLPTM1-211ENST00000589347 PNPT1Q8TCS8 783 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms