RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 CSTF2P33240 577 aaKnown RBP eCLIP8.05□□□□□ -1.12
SMAD4-206ENST00000588860 RBM34P42696 430 aaKnown RBP8.05□□□□□ -1.12
SMAD4-206ENST00000588860 ST13P50502 369 aaKnown RBP8.05□□□□□ -1.12
SMAD4-206ENST00000588860 NR0B1P51843 470 aaKnown RBP8.05□□□□□ -1.12
SMAD4-206ENST00000588860 ZNF91Q05481 1191 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 PLCXD2Q0VAA5 305 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 TRA2AQ13595 282 aaKnown RBP eCLIP8.05□□□□□ -1.12
SMAD4-206ENST00000588860 IRF3Q14653 427 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 EBPQ15125 230 aaKnown RBP8.05□□□□□ -1.12
SMAD4-206ENST00000588860 PGGHGQ32M88 737 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 ALG10BQ5I7T1 473 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 SYT6Q5T7P8 510 aaPredicted RBP8.05□□□□□ -1.12
SMAD4-206ENST00000588860 UBE2UQ5VVX9 321 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 MEDAGQ5VYS4 303 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 PLAG1Q6DJT9 500 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 HSDL2Q6YN16 418 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 SLC16A12Q6ZSM3 486 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 BCDIN3DQ7Z5W3 292 aaKnown RBP8.05□□□□□ -1.12
SMAD4-206ENST00000588860 SLC34A3Q8N130 599 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 FAM26EQ8N5C1 309 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 CLDN22Q8N7P3 220 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 SUMF1Q8NBK3 374 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 ZBTB44Q8NCP5 570 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 OR1N1Q8NGS0 311 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 OR13C2Q8NGS9 318 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 C9orf43Q8TAL5 461 aaPredicted RBP8.05□□□□□ -1.12
SMAD4-206ENST00000588860 TMEM163Q8TC26 289 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 BRIX1Q8TDN6 353 aaKnown RBP8.05□□□□□ -1.12
SMAD4-206ENST00000588860 OIT3Q8WWZ8 545 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 PLEKHA8Q96JA3 519 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 LRR1Q96L50 414 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 SAMD8Q96LT4 415 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 HS6ST2Q96MM7 605 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 ZNF582Q96NG8 517 aaPredicted RBP8.05□□□□□ -1.12
SMAD4-206ENST00000588860 ADOQ96SZ5 270 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 DCUN1D5Q9BTE7 237 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 NRSN2Q9GZP1 204 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 APMAPQ9HDC9 416 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 ATP13A2Q9NQ11 1180 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 UBQLN4Q9NRR5 601 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 C20orf141Q9NUB4 165 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 TAS2R16Q9NYV7 291 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 ENPP5Q9UJA9 477 aa8.05□□□□□ -1.12
SMAD4-206ENST00000588860 RPL36Q9Y3U8 105 aaKnown RBP8.05□□□□□ -1.12
SMAD4-206ENST00000588860 A0A1W2PPW3 197 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 CDC14CA4D256 554 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 SAGE2PA6NJ88 616 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 IDSB3KWA1 339 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 TMX2-CTNND1H3BSU7 103 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 GTPBP1O00178 669 aaKnown RBP8.04□□□□□ -1.12
SMAD4-206ENST00000588860 TO15178 435 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 OIP5O43482 229 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 ICOSLGO75144 302 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 CNOT3O75175 753 aaKnown RBP8.04□□□□□ -1.12
SMAD4-206ENST00000588860 CH25HO95992 272 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 PTHP01270 115 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 ADORA3P0DMS8 318 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 SAGP10523 405 aaPredicted RBP8.04□□□□□ -1.12
SMAD4-206ENST00000588860 DBTP11182 482 aaKnown RBP8.04□□□□□ -1.12
SMAD4-206ENST00000588860 FGF5P12034 268 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 CCNA2P20248 432 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 NR4A1P22736 598 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 LCN1P31025 176 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 GRK6P43250 576 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 SLC15A1P46059 708 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 CCR4P51679 360 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 EMP2P54851 167 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 CTBP2P56545 445 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 COPZ1P61923 177 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 GUCA2AQ02747 115 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 CD226Q15762 336 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 TIGD6Q17RP2 521 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 SYT14P1Q58G82 188 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 SLC25A30Q5SVS4 291 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 FNDC7Q5VTL7 733 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 SLC30A6Q6NXT4 461 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 ULK3Q6PHR2 472 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 ZNF367Q7RTV3 350 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 OVCH1Q7RTY7 1134 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 MRGPREQ86SM8 312 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 BPHLQ86WA6 291 aaPredicted RBP8.04□□□□□ -1.12
SMAD4-206ENST00000588860 ANKRD13BQ86YJ7 626 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 CACTIN-AS1Q8N1I8 211 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 LSMEM1Q8N8F7 131 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 FAM71CQ8NEG0 241 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 OR52L1Q8NGH7 329 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 PHOSPHO1Q8TCT1 267 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 METTL21AQ8WXB1 218 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 BPIFA2Q96DR5 249 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 OMA1Q96E52 524 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 CRELD1Q96HD1 420 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 TMEM80Q96HE8 168 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 CDCA4Q9BXL8 241 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 NCDNQ9UBB6 729 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 IL20RAQ9UHF4 553 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 GPN3Q9UHW5 284 aaPredicted RBP8.04□□□□□ -1.12
SMAD4-206ENST00000588860 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.04□□□□□ -1.12
SMAD4-206ENST00000588860 GPR52Q9Y2T5 361 aa8.04□□□□□ -1.12
SMAD4-206ENST00000588860 TRAV27A0A087WT01 109 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms