RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 TPRP12270 2363 aaKnown RBP20.57■□□□□ 0.88
ACTN4-210ENST00000588618 MPDZO75970 2070 aa20.57■□□□□ 0.88
ACTN4-210ENST00000588618 DPM1O60762 260 aa20.57■□□□□ 0.88
ACTN4-210ENST00000588618 GADD45GO95257 159 aa20.57■□□□□ 0.88
ACTN4-210ENST00000588618 WISP1O95388 367 aa20.57■□□□□ 0.88
ACTN4-210ENST00000588618 NTN1O95631 604 aa20.57■□□□□ 0.88
ACTN4-210ENST00000588618 H1F0P07305 194 aaKnown RBP20.57■□□□□ 0.88
ACTN4-210ENST00000588618 GP1BBP13224 206 aa20.57■□□□□ 0.88
ACTN4-210ENST00000588618 MEOX1P50221 254 aa20.57■□□□□ 0.88
ACTN4-210ENST00000588618 ARHGDIAP52565 204 aa20.57■□□□□ 0.88
ACTN4-210ENST00000588618 TOMM34Q15785 309 aaPredicted RBP20.57■□□□□ 0.88
ACTN4-210ENST00000588618 ALG10BQ5I7T1 473 aa20.57■□□□□ 0.88
ACTN4-210ENST00000588618 COLEC12Q5KU26 742 aa20.57■□□□□ 0.88
ACTN4-210ENST00000588618 ULK3Q6PHR2 472 aa20.57■□□□□ 0.88
ACTN4-210ENST00000588618 OFCC1Q8IZS5 231 aa20.57■□□□□ 0.88
ACTN4-210ENST00000588618 OR52J3Q8NH60 311 aa20.57■□□□□ 0.88
ACTN4-210ENST00000588618 DNAJA4Q8WW22 397 aaPredicted RBP20.57■□□□□ 0.88
ACTN4-210ENST00000588618 SLC41A3Q96GZ6 507 aa20.57■□□□□ 0.88
ACTN4-210ENST00000588618 CENPNQ96H22 339 aaPredicted RBP20.57■□□□□ 0.88
ACTN4-210ENST00000588618 NMNAT1Q9HAN9 279 aaPredicted RBP20.57■□□□□ 0.88
ACTN4-210ENST00000588618 SAMHD1Q9Y3Z3 626 aaKnown RBP20.57■□□□□ 0.88
ACTN4-210ENST00000588618 U3KQV3 271 aa20.57■□□□□ 0.88
ACTN4-210ENST00000588618 ACACBO00763 2458 aa20.57■□□□□ 0.88
ACTN4-210ENST00000588618 PIEZO2Q9H5I5 2752 aa20.56■□□□□ 0.88
ACTN4-210ENST00000588618 LYPD3O95274 346 aa20.56■□□□□ 0.88
ACTN4-210ENST00000588618 SLC1A3P43003 542 aa20.56■□□□□ 0.88
ACTN4-210ENST00000588618 CD97P48960 835 aa20.56■□□□□ 0.88
ACTN4-210ENST00000588618 SLC34A1Q06495 639 aa20.56■□□□□ 0.88
ACTN4-210ENST00000588618 FGD3Q5JSP0 725 aa20.56■□□□□ 0.88
ACTN4-210ENST00000588618 C1GALT1C1Q96EU7 318 aa20.56■□□□□ 0.88
ACTN4-210ENST00000588618 DHRS1Q96LJ7 313 aa20.56■□□□□ 0.88
ACTN4-210ENST00000588618 BARD1Q99728 777 aaKnown RBP20.56■□□□□ 0.88
ACTN4-210ENST00000588618 ACER3Q9NUN7 267 aa20.56■□□□□ 0.88
ACTN4-210ENST00000588618 SLC7A7Q9UM01 511 aa20.56■□□□□ 0.88
ACTN4-210ENST00000588618 TP53TG5Q9Y2B4 290 aa20.56■□□□□ 0.88
ACTN4-210ENST00000588618 MED12Q93074 2177 aa20.56■□□□□ 0.88
ACTN4-210ENST00000588618 A0A1B0GWA3 101 aa20.56■□□□□ 0.88
ACTN4-210ENST00000588618 PINLYPA6NC86 204 aa20.56■□□□□ 0.88
ACTN4-210ENST00000588618 TNFRSF11BO00300 401 aa20.56■□□□□ 0.88
ACTN4-210ENST00000588618 FAM87AP0C7U9 286 aa20.56■□□□□ 0.88
ACTN4-210ENST00000588618 THRBP10828 461 aa20.56■□□□□ 0.88
ACTN4-210ENST00000588618 DPP4P27487 766 aa20.56■□□□□ 0.88
ACTN4-210ENST00000588618 DSCR4P56555 118 aaPredicted RBP20.56■□□□□ 0.88
ACTN4-210ENST00000588618 ZNF169Q14929 603 aaPredicted RBP20.56■□□□□ 0.88
ACTN4-210ENST00000588618 ARSKQ6UWY0 536 aa20.56■□□□□ 0.88
ACTN4-210ENST00000588618 ASB18Q6ZVZ8 466 aa20.56■□□□□ 0.88
ACTN4-210ENST00000588618 EPHX4Q8IUS5 362 aa20.56■□□□□ 0.88
ACTN4-210ENST00000588618 PIK3C3Q8NEB9 887 aa20.56■□□□□ 0.88
ACTN4-210ENST00000588618 C9orf43Q8TAL5 461 aaPredicted RBP20.56■□□□□ 0.88
ACTN4-210ENST00000588618 NRG4Q8WWG1 115 aa20.56■□□□□ 0.88
ACTN4-210ENST00000588618 ST8SIA1Q92185 356 aa20.56■□□□□ 0.88
ACTN4-210ENST00000588618 CRELD1Q96HD1 420 aa20.56■□□□□ 0.88
ACTN4-210ENST00000588618 MED17Q9NVC6 651 aa20.56■□□□□ 0.88
ACTN4-210ENST00000588618 MAGED1Q9Y5V3 778 aaPredicted RBP20.56■□□□□ 0.88
ACTN4-210ENST00000588618 LYVE1Q9Y5Y7 322 aa20.56■□□□□ 0.88
ACTN4-210ENST00000588618 PRRC2CQ9Y520 2896 aaKnown RBP20.55■□□□□ 0.88
ACTN4-210ENST00000588618 A0A087WZY1 265 aa20.55■□□□□ 0.88
ACTN4-210ENST00000588618 A0A0B4J2E0 115 aa20.55■□□□□ 0.88
ACTN4-210ENST00000588618 A0A1B0GX12 115 aa20.55■□□□□ 0.88
ACTN4-210ENST00000588618 ACOT7O00154 380 aa20.55■□□□□ 0.88
ACTN4-210ENST00000588618 PDGFAP04085 211 aa20.55■□□□□ 0.88
ACTN4-210ENST00000588618 GDF1P27539 372 aa20.55■□□□□ 0.88
ACTN4-210ENST00000588618 LAPTM4AQ15012 233 aa20.55■□□□□ 0.88
ACTN4-210ENST00000588618 TRAM2Q15035 370 aa20.55■□□□□ 0.88
ACTN4-210ENST00000588618 SWT1Q5T5J6 900 aaKnown RBP20.55■□□□□ 0.88
ACTN4-210ENST00000588618 GDF7Q7Z4P5 450 aa20.55■□□□□ 0.88
ACTN4-210ENST00000588618 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.55■□□□□ 0.88
ACTN4-210ENST00000588618 HS3ST5Q8IZT8 346 aa20.55■□□□□ 0.88
ACTN4-210ENST00000588618 ICA1LQ8NDH6 482 aa20.55■□□□□ 0.88
ACTN4-210ENST00000588618 SLC39A7Q92504 469 aa20.55■□□□□ 0.88
ACTN4-210ENST00000588618 SDCCAG3Q96C92 435 aa20.55■□□□□ 0.88
ACTN4-210ENST00000588618 ADNPQ9H2P0 1102 aa20.55■□□□□ 0.88
ACTN4-210ENST00000588618 PRORYQ9H606 182 aa20.55■□□□□ 0.88
ACTN4-210ENST00000588618 TUBD1Q9UJT1 453 aa20.55■□□□□ 0.88
ACTN4-210ENST00000588618 TMCC3Q9ULS5 477 aa20.55■□□□□ 0.88
ACTN4-210ENST00000588618 C15orf41Q9Y2V0 281 aa20.55■□□□□ 0.88
ACTN4-210ENST00000588618 LRRC3CA6NJW4 275 aa20.54■□□□□ 0.88
ACTN4-210ENST00000588618 CHP2O43745 196 aa20.54■□□□□ 0.88
ACTN4-210ENST00000588618 HTR3AP46098 478 aa20.54■□□□□ 0.88
ACTN4-210ENST00000588618 LIMS1P48059 325 aa20.54■□□□□ 0.88
ACTN4-210ENST00000588618 FOXO1Q12778 655 aa20.54■□□□□ 0.88
ACTN4-210ENST00000588618 GRINAQ7Z429 371 aa20.54■□□□□ 0.88
ACTN4-210ENST00000588618 OR4C15Q8NGM1 316 aa20.54■□□□□ 0.88
ACTN4-210ENST00000588618 NPAS1Q99742 590 aa20.54■□□□□ 0.88
ACTN4-210ENST00000588618 TTTY12Q9BZ98 90 aa20.54■□□□□ 0.88
ACTN4-210ENST00000588618 ANKRD19PQ9H560 264 aa20.54■□□□□ 0.88
ACTN4-210ENST00000588618 A0A1W2PRQ8 180 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 K7EM74 188 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 TRAPPC6AO75865 159 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 ZNF23P17027 643 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 PEX2P28328 305 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 RFC3P40938 356 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 LSM11P83369 360 aaKnown RBP eCLIP20.53■□□□□ 0.88
ACTN4-210ENST00000588618 DGCR6Q14129 220 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 GK3PQ14409 553 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 DCST1Q5T197 706 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 LPCAT4Q643R3 524 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 WDR88Q6ZMY6 472 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 RRM2BQ7LG56 351 aa20.53■□□□□ 0.88
ACTN4-210ENST00000588618 SLC22A16Q86VW1 577 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms