RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 TMEM81Q6P7N7 255 aa23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 VASH2Q86V25 355 aa23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 CCDC71Q8IV32 467 aaPredicted RBP23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 C8orf59Q8N0T1 100 aaPredicted RBP23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 PFN4Q8NHR9 129 aa23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 B4GALNT2Q8NHY0 566 aa23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 SH2D2AQ9NP31 389 aa23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 PNPLA3Q9NST1 481 aa23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 C20orf141Q9NUB4 165 aa23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 KLRF1Q9NZS2 232 aa23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 HRH3Q9Y5N1 445 aa23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 PCNX3Q9H6A9 2034 aa23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 GMFGO60234 142 aa23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 FPR3P25089 353 aa23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 CRISP1P54107 249 aa23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 PRKCDQ05655 676 aa23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 CBFBQ13951 182 aa23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 COL28A1Q2UY09 1125 aa23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 ZNF468Q5VIY5 522 aaPredicted RBP23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 ATG4DQ86TL0 474 aaPredicted RBP23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 GPR119Q8TDV5 335 aa23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 THOC3Q96J01 351 aaKnown RBP23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 SECISBP2Q96T21 854 aaKnown RBP23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 ADAM19Q9H013 955 aa23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 METTL7AQ9H8H3 244 aa23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 GMPPBQ9Y5P6 360 aa23.73■■□□□ 1.39
SCAMP4-210ENST00000588555 LYNP07948 512 aa23.72■■□□□ 1.39
SCAMP4-210ENST00000588555 IGFBP1P08833 259 aaPredicted RBP23.72■■□□□ 1.39
SCAMP4-210ENST00000588555 PGCP20142 388 aa23.72■■□□□ 1.39
SCAMP4-210ENST00000588555 GSTM3P21266 225 aa23.72■■□□□ 1.39
SCAMP4-210ENST00000588555 ITPKBP27987 946 aa23.72■■□□□ 1.39
SCAMP4-210ENST00000588555 GPR4P46093 362 aa23.72■■□□□ 1.39
SCAMP4-210ENST00000588555 ISL1P61371 349 aa23.72■■□□□ 1.39
SCAMP4-210ENST00000588555 ACER2Q5QJU3 275 aa23.72■■□□□ 1.39
SCAMP4-210ENST00000588555 THAP5Q7Z6K1 395 aa23.72■■□□□ 1.39
SCAMP4-210ENST00000588555 TMEM156Q8N614 296 aa23.72■■□□□ 1.39
SCAMP4-210ENST00000588555 NTNG2Q96CW9 530 aa23.72■■□□□ 1.39
SCAMP4-210ENST00000588555 CCNL2Q96S94 520 aaPredicted RBP23.72■■□□□ 1.39
SCAMP4-210ENST00000588555 SELENONQ9NZV5 590 aa23.72■■□□□ 1.39
SCAMP4-210ENST00000588555 MED31Q9Y3C7 131 aa23.72■■□□□ 1.39
SCAMP4-210ENST00000588555 WIF1Q9Y5W5 379 aa23.72■■□□□ 1.39
SCAMP4-210ENST00000588555 IGLV3-32A0A0A0MS00 114 aa23.71■■□□□ 1.39
SCAMP4-210ENST00000588555 TRABD2BA6NFA1 517 aa23.71■■□□□ 1.39
SCAMP4-210ENST00000588555 SOX14O95416 240 aa23.71■■□□□ 1.39
SCAMP4-210ENST00000588555 RPS6KA3P51812 740 aa23.71■■□□□ 1.39
SCAMP4-210ENST00000588555 CTBP2P56545 445 aa23.71■■□□□ 1.39
SCAMP4-210ENST00000588555 ALDH6A1Q02252 535 aaKnown RBP23.71■■□□□ 1.39
SCAMP4-210ENST00000588555 SRSF6Q13247 344 aaKnown RBP23.71■■□□□ 1.39
SCAMP4-210ENST00000588555 PTGES3Q15185 160 aaKnown RBP23.71■■□□□ 1.39
SCAMP4-210ENST00000588555 ATP1A1-AS1Q5TC04 95 aa23.71■■□□□ 1.39
SCAMP4-210ENST00000588555 OR5M10Q6IEU7 315 aa23.71■■□□□ 1.39
SCAMP4-210ENST00000588555 ISLR2Q6UXK2 745 aa23.71■■□□□ 1.39
SCAMP4-210ENST00000588555 ZNF563Q8TA94 476 aa23.71■■□□□ 1.39
SCAMP4-210ENST00000588555 ZAR1LA6NP61 321 aa23.7■■□□□ 1.39
SCAMP4-210ENST00000588555 KPNA4O00629 521 aaPredicted RBP23.7■■□□□ 1.39
SCAMP4-210ENST00000588555 CDC42EP2O14613 210 aa23.7■■□□□ 1.39
SCAMP4-210ENST00000588555 SNTA1Q13424 505 aa23.7■■□□□ 1.39
SCAMP4-210ENST00000588555 KIF18BQ86Y91 864 aa23.7■■□□□ 1.39
SCAMP4-210ENST00000588555 PAQR8Q8TEZ7 354 aa23.7■■□□□ 1.39
SCAMP4-210ENST00000588555 NXPE2Q96DL1 559 aa23.7■■□□□ 1.39
SCAMP4-210ENST00000588555 FRMD6Q96NE9 622 aa23.7■■□□□ 1.39
SCAMP4-210ENST00000588555 CPNE5Q9HCH3 593 aa23.7■■□□□ 1.39
SCAMP4-210ENST00000588555 KRCC1Q9NPI7 259 aaPredicted RBP23.7■■□□□ 1.39
SCAMP4-210ENST00000588555 ATP13A2Q9NQ11 1180 aa23.7■■□□□ 1.39
SCAMP4-210ENST00000588555 PNMTP11086 282 aa23.7■■□□□ 1.38
SCAMP4-210ENST00000588555 IFI30P13284 250 aa23.7■■□□□ 1.38
SCAMP4-210ENST00000588555 MAKP20794 623 aa23.7■■□□□ 1.38
SCAMP4-210ENST00000588555 GGT2P36268 569 aa23.7■■□□□ 1.38
SCAMP4-210ENST00000588555 SUMO3P55854 103 aaPredicted RBP23.7■■□□□ 1.38
SCAMP4-210ENST00000588555 AIMP2Q13155 320 aaKnown RBP23.7■■□□□ 1.38
SCAMP4-210ENST00000588555 MEP1AQ16819 746 aa23.7■■□□□ 1.38
SCAMP4-210ENST00000588555 RASSF6Q6ZTQ3 369 aa23.7■■□□□ 1.38
SCAMP4-210ENST00000588555 TMPRSS11FQ6ZWK6 438 aa23.7■■□□□ 1.38
SCAMP4-210ENST00000588555 FBLIM1Q8WUP2 373 aa23.7■■□□□ 1.38
SCAMP4-210ENST00000588555 FER1L6-AS2Q96M78 137 aa23.7■■□□□ 1.38
SCAMP4-210ENST00000588555 DSN1Q9H410 356 aa23.7■■□□□ 1.38
SCAMP4-210ENST00000588555 C12orf10Q9HB07 376 aa23.7■■□□□ 1.38
SCAMP4-210ENST00000588555 HPF1Q9NWY4 346 aa23.7■■□□□ 1.38
SCAMP4-210ENST00000588555 KLK13Q9UKR3 277 aa23.7■■□□□ 1.38
SCAMP4-210ENST00000588555 SPTBN2O15020 2390 aa23.7■■□□□ 1.38
SCAMP4-210ENST00000588555 IGKV1D-42A0A075B6H8 117 aa23.69■■□□□ 1.38
SCAMP4-210ENST00000588555 MAGEA13PA6NCF6 341 aa23.69■■□□□ 1.38
SCAMP4-210ENST00000588555 ANKUB1A6NFN9 424 aa23.69■■□□□ 1.38
SCAMP4-210ENST00000588555 GNB5O14775 395 aa23.69■■□□□ 1.38
SCAMP4-210ENST00000588555 NUDT14O95848 222 aa23.69■■□□□ 1.38
SCAMP4-210ENST00000588555 CCL3P10147 92 aa23.69■■□□□ 1.38
SCAMP4-210ENST00000588555 SDHBP21912 280 aa23.69■■□□□ 1.38
SCAMP4-210ENST00000588555 CD47Q08722 323 aa23.69■■□□□ 1.38
SCAMP4-210ENST00000588555 QPRTQ15274 297 aa23.69■■□□□ 1.38
SCAMP4-210ENST00000588555 TBC1D25Q3MII6 688 aa23.69■■□□□ 1.38
SCAMP4-210ENST00000588555 TTC33Q6PID6 262 aaPredicted RBP23.69■■□□□ 1.38
SCAMP4-210ENST00000588555 P3H2Q8IVL5 708 aa23.69■■□□□ 1.38
SCAMP4-210ENST00000588555 SETD9Q8NE22 299 aa23.69■■□□□ 1.38
SCAMP4-210ENST00000588555 BPIFA2Q96DR5 249 aa23.69■■□□□ 1.38
SCAMP4-210ENST00000588555 TMEM5Q9Y2B1 443 aa23.69■■□□□ 1.38
SCAMP4-210ENST00000588555 HSPE1-MOB4S4R3N1 261 aa23.69■■□□□ 1.38
SCAMP4-210ENST00000588555 ZFHX4Q86UP3 3567 aa23.69■■□□□ 1.38
SCAMP4-210ENST00000588555 WISP1O95388 367 aa23.68■■□□□ 1.38
SCAMP4-210ENST00000588555 TACR3P29371 465 aa23.68■■□□□ 1.38
SCAMP4-210ENST00000588555 CLN3Q13286 438 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms