RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 CRHP06850 196 aa17.24■□□□□ 0.35
CIRBP-217ENST00000588230 FCGR2AP12318 317 aa17.24■□□□□ 0.35
CIRBP-217ENST00000588230 SSTR2P30874 369 aa17.24■□□□□ 0.35
CIRBP-217ENST00000588230 DLX5P56178 289 aa17.24■□□□□ 0.35
CIRBP-217ENST00000588230 CTU2Q2VPK5 515 aaKnown RBP17.24■□□□□ 0.35
CIRBP-217ENST00000588230 TMEM176BQ3YBM2 270 aaPredicted RBP17.24■□□□□ 0.35
CIRBP-217ENST00000588230 MSRB3Q8IXL7 192 aa17.24■□□□□ 0.35
CIRBP-217ENST00000588230 OR52P1PQ8NH57 321 aa17.24■□□□□ 0.35
CIRBP-217ENST00000588230 ZNF563Q8TA94 476 aa17.24■□□□□ 0.35
CIRBP-217ENST00000588230 CNOT9Q92600 299 aaKnown RBP17.24■□□□□ 0.35
CIRBP-217ENST00000588230 OSTF1Q92882 214 aa17.24■□□□□ 0.35
CIRBP-217ENST00000588230 RNASE6Q93091 150 aaKnown RBP17.24■□□□□ 0.35
CIRBP-217ENST00000588230 ZNF524Q96C55 264 aa17.24■□□□□ 0.35
CIRBP-217ENST00000588230 TMEM19Q96HH6 336 aa17.24■□□□□ 0.35
CIRBP-217ENST00000588230 ADGRG7Q96K78 797 aa17.24■□□□□ 0.35
CIRBP-217ENST00000588230 EXOSC3Q9NQT5 275 aaKnown RBP17.24■□□□□ 0.35
CIRBP-217ENST00000588230 VAPAQ9P0L0 249 aa17.24■□□□□ 0.35
CIRBP-217ENST00000588230 MCTS1Q9ULC4 181 aaKnown RBP17.24■□□□□ 0.35
CIRBP-217ENST00000588230 A0A0G2JPF8 293 aa17.23■□□□□ 0.35
CIRBP-217ENST00000588230 A0A1W2PNV4 684 aa17.23■□□□□ 0.35
CIRBP-217ENST00000588230 EVPLLA8MZ36 301 aa17.23■□□□□ 0.35
CIRBP-217ENST00000588230 HNRNPCL2B2RXH8 293 aa17.23■□□□□ 0.35
CIRBP-217ENST00000588230 HNRNPCL3B7ZW38 293 aa17.23■□□□□ 0.35
CIRBP-217ENST00000588230 C5orf58C9J3I9 102 aa17.23■□□□□ 0.35
CIRBP-217ENST00000588230 ETV2O00321 342 aaPredicted RBP17.23■□□□□ 0.35
CIRBP-217ENST00000588230 HNRNPCL1O60812 293 aaKnown RBP17.23■□□□□ 0.35
CIRBP-217ENST00000588230 NUDT7P0C024 238 aa17.23■□□□□ 0.35
CIRBP-217ENST00000588230 HNRNPCL4P0DMR1 293 aa17.23■□□□□ 0.35
CIRBP-217ENST00000588230 BMP2P12643 396 aa17.23■□□□□ 0.35
CIRBP-217ENST00000588230 NID1P14543 1247 aa17.23■□□□□ 0.35
CIRBP-217ENST00000588230 RPS4Y1P22090 263 aaKnown RBP17.23■□□□□ 0.35
CIRBP-217ENST00000588230 SHC1P29353 583 aa17.23■□□□□ 0.35
CIRBP-217ENST00000588230 SLC6A8P48029 635 aa17.23■□□□□ 0.35
CIRBP-217ENST00000588230 CARD18P57730 90 aa17.23■□□□□ 0.35
CIRBP-217ENST00000588230 MERTKQ12866 999 aa17.23■□□□□ 0.35
CIRBP-217ENST00000588230 SELENBP1Q13228 472 aa17.23■□□□□ 0.35
CIRBP-217ENST00000588230 FBXL19-AS1Q494R0 122 aa17.23■□□□□ 0.35
CIRBP-217ENST00000588230 CNEP1R1Q8N9A8 125 aa17.23■□□□□ 0.35
CIRBP-217ENST00000588230 TSPEARQ8WU66 669 aa17.23■□□□□ 0.35
CIRBP-217ENST00000588230 PIGMQ9H3S5 423 aa17.23■□□□□ 0.35
CIRBP-217ENST00000588230 RNF122Q9H9V4 155 aa17.23■□□□□ 0.35
CIRBP-217ENST00000588230 SLC24A3Q9HC58 644 aa17.23■□□□□ 0.35
CIRBP-217ENST00000588230 A4GALTQ9NPC4 353 aa17.23■□□□□ 0.35
CIRBP-217ENST00000588230 TIGARQ9NQ88 270 aa17.23■□□□□ 0.35
CIRBP-217ENST00000588230 SERINC1Q9NRX5 453 aa17.23■□□□□ 0.35
CIRBP-217ENST00000588230 ACER3Q9NUN7 267 aa17.23■□□□□ 0.35
CIRBP-217ENST00000588230 MRGBPQ9NV56 204 aa17.23■□□□□ 0.35
CIRBP-217ENST00000588230 FOXD3Q9UJU5 478 aaPredicted RBP17.23■□□□□ 0.35
CIRBP-217ENST00000588230 ZNF232Q9UNY5 417 aa17.23■□□□□ 0.35
CIRBP-217ENST00000588230 CORO2BQ9UQ03 480 aa17.23■□□□□ 0.35
CIRBP-217ENST00000588230 SPG11Q96JI7 2443 aa17.22■□□□□ 0.35
CIRBP-217ENST00000588230 CELSR1Q9NYQ6 3014 aa17.22■□□□□ 0.35
CIRBP-217ENST00000588230 TRBV5-3A0A0A0MS03 114 aa17.22■□□□□ 0.35
CIRBP-217ENST00000588230 AQP8O94778 261 aa17.22■□□□□ 0.35
CIRBP-217ENST00000588230 CPA2P48052 419 aa17.22■□□□□ 0.35
CIRBP-217ENST00000588230 RPS26P11Q5JNZ5 115 aaPredicted RBP17.22■□□□□ 0.35
CIRBP-217ENST00000588230 GCNT6Q5T4J0 391 aa17.22■□□□□ 0.35
CIRBP-217ENST00000588230 MRPL2Q5T653 305 aaKnown RBP17.22■□□□□ 0.35
CIRBP-217ENST00000588230 CGB2Q6NT52 195 aa17.22■□□□□ 0.35
CIRBP-217ENST00000588230 DLEU7Q6UYE1 221 aa17.22■□□□□ 0.35
CIRBP-217ENST00000588230 MAL2Q969L2 176 aa17.22■□□□□ 0.35
CIRBP-217ENST00000588230 DNAJB12Q9NXW2 375 aaKnown RBP17.22■□□□□ 0.35
CIRBP-217ENST00000588230 PACSIN3Q9UKS6 424 aa17.22■□□□□ 0.35
CIRBP-217ENST00000588230 DSPPQ9NZW4 1301 aa17.21■□□□□ 0.35
CIRBP-217ENST00000588230 TNFSF13O75888 250 aa17.21■□□□□ 0.35
CIRBP-217ENST00000588230 PLGP00747 810 aaPredicted RBP17.21■□□□□ 0.35
CIRBP-217ENST00000588230 UQCRBP14927 111 aa17.21■□□□□ 0.35
CIRBP-217ENST00000588230 SLC7A1P30825 629 aa17.21■□□□□ 0.35
CIRBP-217ENST00000588230 PEX19P40855 299 aa17.21■□□□□ 0.35
CIRBP-217ENST00000588230 SIRPAP78324 504 aa17.21■□□□□ 0.35
CIRBP-217ENST00000588230 TLE4Q04727 773 aa17.21■□□□□ 0.35
CIRBP-217ENST00000588230 LARS2Q15031 903 aaKnown RBP17.21■□□□□ 0.35
CIRBP-217ENST00000588230 LIN52Q52LA3 116 aa17.21■□□□□ 0.35
CIRBP-217ENST00000588230 PRAMEF8Q5VWM4 474 aa17.21■□□□□ 0.35
CIRBP-217ENST00000588230 PRAMEF7Q5VXH5 474 aa17.21■□□□□ 0.35
CIRBP-217ENST00000588230 PLEKHM3Q6ZWE6 761 aa17.21■□□□□ 0.35
CIRBP-217ENST00000588230 DHDDSQ86SQ9 333 aa17.21■□□□□ 0.35
CIRBP-217ENST00000588230 LUZP2Q86TE4 346 aa17.21■□□□□ 0.35
CIRBP-217ENST00000588230 VRK2Q86Y07 508 aa17.21■□□□□ 0.35
CIRBP-217ENST00000588230 KIF18BQ86Y91 864 aa17.21■□□□□ 0.35
CIRBP-217ENST00000588230 ZNF440Q8IYI8 595 aa17.21■□□□□ 0.35
CIRBP-217ENST00000588230 DPP10Q8N608 796 aa17.21■□□□□ 0.35
CIRBP-217ENST00000588230 REXO5Q96IC2 774 aaKnown RBP17.21■□□□□ 0.35
CIRBP-217ENST00000588230 MCCC2Q9HCC0 563 aa17.21■□□□□ 0.35
CIRBP-217ENST00000588230 BCL2L10Q9HD36 194 aa17.21■□□□□ 0.35
CIRBP-217ENST00000588230 JKAMPQ9P055 326 aa17.21■□□□□ 0.35
CIRBP-217ENST00000588230 KLHL14Q9P2G3 628 aa17.21■□□□□ 0.35
CIRBP-217ENST00000588230 GMEB1Q9Y692 573 aa17.21■□□□□ 0.35
CIRBP-217ENST00000588230 ANKRD17O75179 2603 aaKnown RBP17.2■□□□□ 0.34
CIRBP-217ENST00000588230 CFAP73A6NFT4 308 aa17.2■□□□□ 0.34
CIRBP-217ENST00000588230 SMNDC1O75940 238 aaKnown RBP eCLIP17.2■□□□□ 0.342e-6■■□□□ 12.8
CIRBP-217ENST00000588230 THBS1P07996 1170 aa17.2■□□□□ 0.34
CIRBP-217ENST00000588230 PABPC4LP0CB38 370 aaKnown RBP17.2■□□□□ 0.34
CIRBP-217ENST00000588230 GPX2P18283 190 aa17.2■□□□□ 0.34
CIRBP-217ENST00000588230 APOBEC1P41238 236 aaKnown RBP17.2■□□□□ 0.34
CIRBP-217ENST00000588230 KIR2DL2P43627 348 aaPredicted RBP17.2■□□□□ 0.34
CIRBP-217ENST00000588230 IDH2P48735 452 aaKnown RBP17.2■□□□□ 0.34
CIRBP-217ENST00000588230 PLAURQ03405 335 aa17.2■□□□□ 0.34
CIRBP-217ENST00000588230 MYBPHQ13203 477 aa17.2■□□□□ 0.34
CIRBP-217ENST00000588230 NFYCQ13952 458 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms