RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 NATD1Q8N6N6 113 aa12.53□□□□□ -0.4
ERCC1-205ENST00000587888 FNDC5Q8NAU1 212 aa12.53□□□□□ -0.4
ERCC1-205ENST00000587888 PSMA8Q8TAA3 256 aa12.53□□□□□ -0.4
ERCC1-205ENST00000587888 ARL8AQ96BM9 186 aa12.53□□□□□ -0.4
ERCC1-205ENST00000587888 HS6ST2Q96MM7 605 aa12.53□□□□□ -0.4
ERCC1-205ENST00000587888 DUSP26Q9BV47 211 aa12.53□□□□□ -0.4
ERCC1-205ENST00000587888 REPIN1Q9BWE0 567 aaKnown RBP12.53□□□□□ -0.4
ERCC1-205ENST00000587888 ALG2Q9H553 416 aa12.53□□□□□ -0.4
ERCC1-205ENST00000587888 L2HGDHQ9H9P8 463 aa12.53□□□□□ -0.4
ERCC1-205ENST00000587888 SERINC1Q9NRX5 453 aa12.53□□□□□ -0.4
ERCC1-205ENST00000587888 HIVEP2P31629 2446 aa12.53□□□□□ -0.4
ERCC1-205ENST00000587888 FREM1Q5H8C1 2179 aa12.52□□□□□ -0.4
ERCC1-205ENST00000587888 SERINC4A6NH21 518 aa12.52□□□□□ -0.41
ERCC1-205ENST00000587888 SHISA9B4DS77 424 aa12.52□□□□□ -0.41
ERCC1-205ENST00000587888 SULT2B1O00204 365 aa12.52□□□□□ -0.41
ERCC1-205ENST00000587888 SMAD9O15198 467 aaKnown RBP12.52□□□□□ -0.41
ERCC1-205ENST00000587888 SSX4O60224 188 aa12.52□□□□□ -0.41
ERCC1-205ENST00000587888 FCMRO60667 390 aa12.52□□□□□ -0.41
ERCC1-205ENST00000587888 CYTIPO60759 359 aa12.52□□□□□ -0.41
ERCC1-205ENST00000587888 SPAG7O75391 227 aa12.52□□□□□ -0.41
ERCC1-205ENST00000587888 SKAP2O75563 359 aaPredicted RBP12.52□□□□□ -0.41
ERCC1-205ENST00000587888 LYPLA1O75608 230 aaPredicted RBP12.52□□□□□ -0.41
ERCC1-205ENST00000587888 H6PDO95479 791 aa12.52□□□□□ -0.41
ERCC1-205ENST00000587888 IGHV3-9P01782 118 aa12.52□□□□□ -0.41
ERCC1-205ENST00000587888 PRPS1L1P21108 318 aa12.52□□□□□ -0.41
ERCC1-205ENST00000587888 MATN1P21941 496 aa12.52□□□□□ -0.41
ERCC1-205ENST00000587888 IGHV1-2P23083 117 aa12.52□□□□□ -0.41
ERCC1-205ENST00000587888 CASP9P55211 416 aa12.52□□□□□ -0.41
ERCC1-205ENST00000587888 HBA1P69905 142 aa12.52□□□□□ -0.41
ERCC1-205ENST00000587888 MERTKQ12866 999 aa12.52□□□□□ -0.41
ERCC1-205ENST00000587888 XKR7Q5GH72 579 aa12.52□□□□□ -0.41
ERCC1-205ENST00000587888 SLC25A53Q5H9E4 307 aa12.52□□□□□ -0.41
ERCC1-205ENST00000587888 SEZ6L2Q6UXD5 910 aa12.52□□□□□ -0.41
ERCC1-205ENST00000587888 DNAJC14Q6Y2X3 702 aaPredicted RBP12.52□□□□□ -0.41
ERCC1-205ENST00000587888 C6orf120Q7Z4R8 191 aa12.52□□□□□ -0.41
ERCC1-205ENST00000587888 UBE2J2Q8N2K1 259 aa12.52□□□□□ -0.41
ERCC1-205ENST00000587888 SFXN5Q8TD22 340 aa12.52□□□□□ -0.41
ERCC1-205ENST00000587888 ZNF75CPQ92670 426 aaPredicted RBP12.52□□□□□ -0.41
ERCC1-205ENST00000587888 TUBGCP3Q96CW5 907 aa12.52□□□□□ -0.41
ERCC1-205ENST00000587888 DNAJA3Q96EY1 480 aa12.52□□□□□ -0.41
ERCC1-205ENST00000587888 APOPT1Q96IL0 206 aa12.52□□□□□ -0.41
ERCC1-205ENST00000587888 TRAF4Q9BUZ4 470 aaPredicted RBP12.52□□□□□ -0.41
ERCC1-205ENST00000587888 LAT2Q9GZY6 243 aa12.52□□□□□ -0.41
ERCC1-205ENST00000587888 ZDHHC2Q9UIJ5 367 aa12.52□□□□□ -0.41
ERCC1-205ENST00000587888 KCNE5Q9UJ90 142 aa12.52□□□□□ -0.41
ERCC1-205ENST00000587888 MKLN1Q9UL63 735 aa12.52□□□□□ -0.41
ERCC1-205ENST00000587888 CHD3Q12873 2000 aaKnown RBP12.52□□□□□ -0.41
ERCC1-205ENST00000587888 ABCD4O14678 606 aa12.51□□□□□ -0.41
ERCC1-205ENST00000587888 CSTAP01040 98 aa12.51□□□□□ -0.41
ERCC1-205ENST00000587888 UBTFL6P0CB48 400 aaPredicted RBP12.51□□□□□ -0.41
ERCC1-205ENST00000587888 TFPIP10646 304 aa12.51□□□□□ -0.41
ERCC1-205ENST00000587888 G6PDP11413 515 aa12.51□□□□□ -0.41
ERCC1-205ENST00000587888 GGT1P19440 569 aa12.51□□□□□ -0.41
ERCC1-205ENST00000587888 DIO1P49895 249 aa12.51□□□□□ -0.41
ERCC1-205ENST00000587888 SESN3P58005 492 aa12.51□□□□□ -0.41
ERCC1-205ENST00000587888 TIMM23BQ5SRD1 257 aa12.51□□□□□ -0.41
ERCC1-205ENST00000587888 C3orf33Q6P1S2 294 aa12.51□□□□□ -0.41
ERCC1-205ENST00000587888 BHLHB9Q6PI77 547 aa12.51□□□□□ -0.41
ERCC1-205ENST00000587888 GALNT5Q7Z7M9 940 aa12.51□□□□□ -0.41
ERCC1-205ENST00000587888 PIAS4Q8N2W9 510 aaPredicted RBP12.51□□□□□ -0.41
ERCC1-205ENST00000587888 MOAP1Q96BY2 351 aa12.51□□□□□ -0.41
ERCC1-205ENST00000587888 RHNO1Q9BSD3 238 aa12.51□□□□□ -0.41
ERCC1-205ENST00000587888 BHLHE41Q9C0J9 482 aaPredicted RBP12.51□□□□□ -0.41
ERCC1-205ENST00000587888 NMUR2Q9GZQ4 415 aa12.51□□□□□ -0.41
ERCC1-205ENST00000587888 FAIMQ9NVQ4 179 aa12.51□□□□□ -0.41
ERCC1-205ENST00000587888 B3GALT5Q9Y2C3 310 aa12.51□□□□□ -0.41
ERCC1-205ENST00000587888 CSPG4Q6UVK1 2322 aa12.51□□□□□ -0.41
ERCC1-205ENST00000587888 NUP214P35658 2090 aaPredicted RBP12.5□□□□□ -0.41
ERCC1-205ENST00000587888 CENPVL1A0A0U1RR11 272 aa12.5□□□□□ -0.41
ERCC1-205ENST00000587888 A0A1W2PR80 420 aa12.5□□□□□ -0.41
ERCC1-205ENST00000587888 CIB4A0PJX0 185 aa12.5□□□□□ -0.41
ERCC1-205ENST00000587888 DUXAA6NLW8 204 aa12.5□□□□□ -0.41
ERCC1-205ENST00000587888 CCT8L1PA6NM43 557 aa12.5□□□□□ -0.41
ERCC1-205ENST00000587888 ZNF724A8MTY0 619 aa12.5□□□□□ -0.41
ERCC1-205ENST00000587888 CD5LO43866 347 aa12.5□□□□□ -0.41
ERCC1-205ENST00000587888 GPRIN2O60269 458 aa12.5□□□□□ -0.41
ERCC1-205ENST00000587888 STX11O75558 287 aa12.5□□□□□ -0.41
ERCC1-205ENST00000587888 RAD51DO75771 328 aa12.5□□□□□ -0.41
ERCC1-205ENST00000587888 ARRB2P32121 409 aa12.5□□□□□ -0.41
ERCC1-205ENST00000587888 CDH11P55287 796 aa12.5□□□□□ -0.41
ERCC1-205ENST00000587888 CHRNEQ04844 493 aa12.5□□□□□ -0.41
ERCC1-205ENST00000587888 SKP2Q13309 424 aa12.5□□□□□ -0.41
ERCC1-205ENST00000587888 ZNF141Q15928 474 aa12.5□□□□□ -0.41
ERCC1-205ENST00000587888 OR4F3Q6IEY1 312 aa12.5□□□□□ -0.41
ERCC1-205ENST00000587888 TMPPEQ6ZT21 453 aa12.5□□□□□ -0.41
ERCC1-205ENST00000587888 C16orf62Q7Z3J2 963 aa12.5□□□□□ -0.41
ERCC1-205ENST00000587888 RIMKLAQ8IXN7 391 aa12.5□□□□□ -0.41
ERCC1-205ENST00000587888 CLECL1Q8IZS7 167 aa12.5□□□□□ -0.41
ERCC1-205ENST00000587888 ZNF433Q8N7K0 673 aaPredicted RBP12.5□□□□□ -0.41
ERCC1-205ENST00000587888 EIF1ADQ8N9N8 165 aaKnown RBP12.5□□□□□ -0.41
ERCC1-205ENST00000587888 OR52N5Q8NH56 324 aa12.5□□□□□ -0.41
ERCC1-205ENST00000587888 TCP10LQ8TDR4 215 aa12.5□□□□□ -0.41
ERCC1-205ENST00000587888 TMEM234Q8WY98 164 aa12.5□□□□□ -0.41
ERCC1-205ENST00000587888 PPP1R36Q96LQ0 422 aa12.5□□□□□ -0.41
ERCC1-205ENST00000587888 C1QTNF6Q9BXI9 259 aa12.5□□□□□ -0.41
ERCC1-205ENST00000587888 SERHL2Q9H4I8 314 aa12.5□□□□□ -0.41
ERCC1-205ENST00000587888 BARX1Q9HBU1 254 aaPredicted RBP12.5□□□□□ -0.41
ERCC1-205ENST00000587888 NPAP1Q9NZP6 1156 aa12.5□□□□□ -0.41
ERCC1-205ENST00000587888 RTTNQ86VV8 2226 aa12.5□□□□□ -0.41
ERCC1-205ENST00000587888 JMJD1CQ15652 2540 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms