RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 NDUFAF6Q330K2 333 aa12.42□□□□□ -0.42
DNMT1-213ENST00000587604 LSM12Q3MHD2 195 aaKnown RBP12.42□□□□□ -0.42
DNMT1-213ENST00000587604 ARL13AQ5H913 290 aaPredicted RBP12.42□□□□□ -0.42
DNMT1-213ENST00000587604 C10orf107Q8IVU9 208 aa12.42□□□□□ -0.42
DNMT1-213ENST00000587604 NATD1Q8N6N6 113 aa12.42□□□□□ -0.42
DNMT1-213ENST00000587604 ZNF614Q8N883 585 aa12.42□□□□□ -0.42
DNMT1-213ENST00000587604 OR10H5Q8NGA6 315 aa12.42□□□□□ -0.42
DNMT1-213ENST00000587604 RFWD2Q8NHY2 731 aa12.42□□□□□ -0.42
DNMT1-213ENST00000587604 ZNF775Q96BV0 537 aaPredicted RBP12.42□□□□□ -0.42
DNMT1-213ENST00000587604 ADAD1Q96M93 576 aaKnown RBP12.42□□□□□ -0.42
DNMT1-213ENST00000587604 ZNF300Q96RE9 604 aaPredicted RBP12.42□□□□□ -0.42
DNMT1-213ENST00000587604 GATA5Q9BWX5 397 aaPredicted RBP12.42□□□□□ -0.42
DNMT1-213ENST00000587604 MID2Q9UJV3 735 aa12.42□□□□□ -0.42
DNMT1-213ENST00000587604 OR5H1A6NKK0 313 aa12.41□□□□□ -0.42
DNMT1-213ENST00000587604 GPRIN2O60269 458 aa12.41□□□□□ -0.42
DNMT1-213ENST00000587604 TRIM13O60858 407 aa12.41□□□□□ -0.42
DNMT1-213ENST00000587604 DNAJA2O60884 412 aa12.41□□□□□ -0.42
DNMT1-213ENST00000587604 UBL4AP11441 157 aa12.41□□□□□ -0.42
DNMT1-213ENST00000587604 MAPK1P28482 360 aa12.41□□□□□ -0.42
DNMT1-213ENST00000587604 TTKP33981 857 aa12.41□□□□□ -0.42
DNMT1-213ENST00000587604 CDH11P55287 796 aa12.41□□□□□ -0.42
DNMT1-213ENST00000587604 DSCR9P59020 149 aa12.41□□□□□ -0.42
DNMT1-213ENST00000587604 UGT3A2Q3SY77 523 aa12.41□□□□□ -0.42
DNMT1-213ENST00000587604 SPDYE7PQ495Y7 208 aa12.41□□□□□ -0.42
DNMT1-213ENST00000587604 TIGD2Q4W5G0 525 aa12.41□□□□□ -0.42
DNMT1-213ENST00000587604 C3orf33Q6P1S2 294 aa12.41□□□□□ -0.42
DNMT1-213ENST00000587604 GALNT5Q7Z7M9 940 aa12.41□□□□□ -0.42
DNMT1-213ENST00000587604 DDIASQ8IXT1 998 aa12.41□□□□□ -0.42
DNMT1-213ENST00000587604 ZNF100Q8IYN0 542 aa12.41□□□□□ -0.42
DNMT1-213ENST00000587604 TMCO5AQ8N6Q1 288 aa12.41□□□□□ -0.42
DNMT1-213ENST00000587604 ZNF433Q8N7K0 673 aaPredicted RBP12.41□□□□□ -0.42
DNMT1-213ENST00000587604 OR2W6PQ8NHA6 318 aa12.41□□□□□ -0.42
DNMT1-213ENST00000587604 TWIST2Q8WVJ9 160 aa12.41□□□□□ -0.42
DNMT1-213ENST00000587604 MOAP1Q96BY2 351 aa12.41□□□□□ -0.42
DNMT1-213ENST00000587604 PPP3R2Q96LZ3 170 aa12.41□□□□□ -0.42
DNMT1-213ENST00000587604 OR5B2Q96R09 309 aa12.41□□□□□ -0.42
DNMT1-213ENST00000587604 SDF2Q99470 211 aa12.41□□□□□ -0.42
DNMT1-213ENST00000587604 SERINC1Q9NRX5 453 aa12.41□□□□□ -0.42
DNMT1-213ENST00000587604 ATAD3AQ9NVI7 634 aa12.41□□□□□ -0.42
DNMT1-213ENST00000587604 NPAP1Q9NZP6 1156 aa12.41□□□□□ -0.42
DNMT1-213ENST00000587604 MGAT4BQ9UQ53 548 aa12.41□□□□□ -0.42
DNMT1-213ENST00000587604 TRAF6Q9Y4K3 522 aa12.41□□□□□ -0.42
DNMT1-213ENST00000587604 MALRD1Q5VYJ5 2156 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 SVEP1Q4LDE5 3571 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 IGHV4-30-2A0A087WSY4 118 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 A0A096LNT2 108 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 FAM234BA2RU67 622 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 LYPLA1O75608 230 aaPredicted RBP12.4□□□□□ -0.42
DNMT1-213ENST00000587604 H6PDO95479 791 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 C6orf47O95873 294 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 FAM157CP0CG43 387 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 KRT4P19013 534 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 PTNP21246 168 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 DIO1P49895 249 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 CCR4P51679 360 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 NUDT6P53370 316 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 IRX1P78414 480 aaPredicted RBP12.4□□□□□ -0.42
DNMT1-213ENST00000587604 PCLAFQ15004 111 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 PDK3Q15120 406 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 C6orf52Q5T4I8 152 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 FBXW9Q5XUX1 488 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 CLEC2AQ6UVW9 174 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 TMEM108Q6UXF1 575 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 TMPPEQ6ZT21 453 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.4□□□□□ -0.42
DNMT1-213ENST00000587604 SFXN5Q8TD22 340 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 ST8SIA1Q92185 356 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 COQ8BQ96D53 544 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 OR7D2Q96RA2 312 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 TNFRSF13CQ96RJ3 184 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 PRPF18Q99633 342 aaKnown RBP12.4□□□□□ -0.42
DNMT1-213ENST00000587604 DHRS9Q9BPW9 319 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 THUMPD3Q9BV44 507 aaKnown RBP12.4□□□□□ -0.42
DNMT1-213ENST00000587604 CACNG6Q9BXT2 260 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 NMUR2Q9GZQ4 415 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 LAT2Q9GZY6 243 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 PPCSQ9HAB8 311 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 CBLN4Q9NTU7 201 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 CDC42EP3Q9UKI2 254 aa12.4□□□□□ -0.42
DNMT1-213ENST00000587604 IGKV3D-15A0A087WSY6 115 aa12.39□□□□□ -0.43
DNMT1-213ENST00000587604 SERINC4A6NH21 518 aa12.39□□□□□ -0.43
DNMT1-213ENST00000587604 ELOA3DA6NLF2 546 aaPredicted RBP12.39□□□□□ -0.43
DNMT1-213ENST00000587604 DUXAA6NLW8 204 aa12.39□□□□□ -0.43
DNMT1-213ENST00000587604 TMEM233B4DJY2 109 aa12.39□□□□□ -0.43
DNMT1-213ENST00000587604 E7EQL1 145 aa12.39□□□□□ -0.43
DNMT1-213ENST00000587604 SULT2B1O00204 365 aa12.39□□□□□ -0.43
DNMT1-213ENST00000587604 PIP5K1BO14986 540 aa12.39□□□□□ -0.43
DNMT1-213ENST00000587604 PEX11AO75192 247 aa12.39□□□□□ -0.43
DNMT1-213ENST00000587604 SHBGP04278 402 aa12.39□□□□□ -0.43
DNMT1-213ENST00000587604 CHRNGP07510 517 aa12.39□□□□□ -0.43
DNMT1-213ENST00000587604 PTAFRP25105 342 aa12.39□□□□□ -0.43
DNMT1-213ENST00000587604 SESN3P58005 492 aa12.39□□□□□ -0.43
DNMT1-213ENST00000587604 CSNK2A1P68400 391 aaPredicted RBP12.39□□□□□ -0.43
DNMT1-213ENST00000587604 LOXL1Q08397 574 aaPredicted RBP12.39□□□□□ -0.43
DNMT1-213ENST00000587604 SKP2Q13309 424 aa12.39□□□□□ -0.43
DNMT1-213ENST00000587604 PTGR1Q14914 329 aa12.39□□□□□ -0.43
DNMT1-213ENST00000587604 RAB35Q15286 201 aa12.39□□□□□ -0.43
DNMT1-213ENST00000587604 ZNF141Q15928 474 aa12.39□□□□□ -0.43
DNMT1-213ENST00000587604 TMEM249Q2WGJ8 235 aa12.39□□□□□ -0.43
DNMT1-213ENST00000587604 ELOA3BQ3SY89 546 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms