RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 DGAT2Q96PD7 388 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 OR7D2Q96RA2 312 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 CSF3RQ99062 836 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 SLC29A1Q99808 456 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 SMR3AQ99954 134 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 APOL4Q9BPW4 351 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 ZNF559Q9BR84 538 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 PIGUQ9H490 435 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 ZNF556Q9HAH1 456 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 TUBA8Q9NY65 449 aaPredicted RBP7.16□□□□□ -1.26
VMP1-204ENST00000587259 NDUFAF4Q9P032 175 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 ZNF223Q9UK11 482 aaPredicted RBP7.16□□□□□ -1.26
VMP1-204ENST00000587259 TMCC3Q9ULS5 477 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 ABCG2Q9UNQ0 655 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 ZNF232Q9UNY5 417 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 CFL2Q9Y281 166 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 POFUT2Q9Y2G5 429 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 ENPP4Q9Y6X5 453 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 ZNF407Q9C0G0 2248 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 TRBV11-1A0A0K0K1C0 115 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 TGFBR3LH3BV60 316 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 TNFRSF11BO00300 401 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 SLC16A6O15403 523 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 PRKRAO75569 313 aaKnown RBP7.15□□□□□ -1.26
VMP1-204ENST00000587259 UGT2B17O75795 530 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 GADD45GO95257 159 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 FESP07332 822 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 CYC1P08574 325 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 CELA3AP09093 270 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 UBTFL6P0CB48 400 aaPredicted RBP7.15□□□□□ -1.26
VMP1-204ENST00000587259 KLK2P20151 261 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 CD247P20963 164 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 RRM2P31350 389 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 STT3AP46977 705 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 KCNJ5P48544 419 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 HLCSP50747 726 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 HMGA2P52926 109 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 CRYBA2P53672 197 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 RPS26P62854 115 aaKnown RBP7.15□□□□□ -1.26
VMP1-204ENST00000587259 MAP4K2Q12851 820 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 PRICKLE4Q2TBC4 344 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 ARHGAP11BQ3KRB8 267 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 FAM180BQ6P0A1 224 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 FAHD1Q6P587 224 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 TTC33Q6PID6 262 aaPredicted RBP7.15□□□□□ -1.26
VMP1-204ENST00000587259 SLC44A2Q8IWA5 706 aaPredicted RBP7.15□□□□□ -1.26
VMP1-204ENST00000587259 DMRTC2Q8IXT2 367 aaPredicted RBP7.15□□□□□ -1.26
VMP1-204ENST00000587259 ATG16L2Q8NAA4 619 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 CHDHQ8NE62 594 aaPredicted RBP7.15□□□□□ -1.26
VMP1-204ENST00000587259 NFAM1Q8NET5 270 aaPredicted RBP7.15□□□□□ -1.26
VMP1-204ENST00000587259 OR5D16Q8NGK9 328 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 LILRB4Q8NHJ6 448 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 FAM110BQ8TC76 370 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 GIPC3Q8TF64 312 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 RND1Q92730 232 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 RAB8BQ92930 207 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 CTHRC1Q96CG8 243 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 RBM18Q96H35 190 aaKnown RBP7.15□□□□□ -1.26
VMP1-204ENST00000587259 CNPPD1Q9BV87 410 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 ANKRD19PQ9H560 264 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 MTHFD2LQ9H903 347 aaPredicted RBP7.15□□□□□ -1.26
VMP1-204ENST00000587259 VCX3AQ9NNX9 186 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 KRCC1Q9NPI7 259 aaPredicted RBP7.15□□□□□ -1.26
VMP1-204ENST00000587259 PRTFDC1Q9NRG1 225 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 KRT84Q9NSB2 600 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 PDP1Q9P0J1 537 aaPredicted RBP7.15□□□□□ -1.26
VMP1-204ENST00000587259 PRODH2Q9UF12 536 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 PLEKHA6Q9Y2H5 1048 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 SH3GLB1Q9Y371 365 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 DSPPQ9NZW4 1301 aa7.15□□□□□ -1.26
VMP1-204ENST00000587259 HRNRQ86YZ3 2850 aaPredicted RBP7.14□□□□□ -1.27
VMP1-204ENST00000587259 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 SMIM31A0A1B0GVY4 71 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 SAGE2PA6NJ88 616 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 KDM4EB2RXH2 506 aaPredicted RBP7.14□□□□□ -1.27
VMP1-204ENST00000587259 FAAHO00519 579 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 DLGAP1O14490 977 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 FGF17O60258 216 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 LDB3O75112 727 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 STX11O75558 287 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 ITGA10O75578 1167 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 GCM2O75603 506 aaPredicted RBP7.14□□□□□ -1.27
VMP1-204ENST00000587259 CCNB2O95067 398 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 SNAP29O95721 258 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 CLPTM1O96005 669 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 ADAP00813 363 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 OPN1SWP03999 348 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 DBIP07108 87 aaKnown RBP7.14□□□□□ -1.27
VMP1-204ENST00000587259 H1F0P07305 194 aaKnown RBP7.14□□□□□ -1.27
VMP1-204ENST00000587259 PABPC4LP0CB38 370 aaKnown RBP7.14□□□□□ -1.27
VMP1-204ENST00000587259 CHRNB4P30926 498 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 RYKP34925 604 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 IFNGR2P38484 337 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 ADH7P40394 386 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 MAN2A2P49641 1150 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 PSMD4P55036 377 aaKnown RBP7.14□□□□□ -1.27
VMP1-204ENST00000587259 NR1H2P55055 460 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 CASP9P55211 416 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 CSNK2BP67870 215 aa7.14□□□□□ -1.27
VMP1-204ENST00000587259 ADARB1P78563 741 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms