RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 FAPQ12884 760 aa17.14■□□□□ 0.33
TRAF4-216ENST00000586813 STK11Q15831 433 aa17.14■□□□□ 0.33
TRAF4-216ENST00000586813 TIGD2Q4W5G0 525 aa17.14■□□□□ 0.33
TRAF4-216ENST00000586813 HEPHL1Q6MZM0 1159 aa17.14■□□□□ 0.33
TRAF4-216ENST00000586813 DNAJC14Q6Y2X3 702 aaPredicted RBP17.14■□□□□ 0.33
TRAF4-216ENST00000586813 CXXC5Q7LFL8 322 aaKnown RBP17.14■□□□□ 0.33
TRAF4-216ENST00000586813 RIMKLAQ8IXN7 391 aa17.14■□□□□ 0.33
TRAF4-216ENST00000586813 OR5B2Q96R09 309 aa17.14■□□□□ 0.33
TRAF4-216ENST00000586813 ZNF300Q96RE9 604 aaPredicted RBP17.14■□□□□ 0.33
TRAF4-216ENST00000586813 DUSP26Q9BV47 211 aa17.14■□□□□ 0.33
TRAF4-216ENST00000586813 QRSL1Q9H0R6 528 aaKnown RBP17.14■□□□□ 0.33
TRAF4-216ENST00000586813 SLCO5A1Q9H2Y9 848 aa17.14■□□□□ 0.33
TRAF4-216ENST00000586813 SERHL2Q9H4I8 314 aa17.14■□□□□ 0.33
TRAF4-216ENST00000586813 TLDC2A0PJX2 215 aa17.13■□□□□ 0.33
TRAF4-216ENST00000586813 SERINC4A6NH21 518 aa17.13■□□□□ 0.33
TRAF4-216ENST00000586813 DNAJA2O60884 412 aa17.13■□□□□ 0.33
TRAF4-216ENST00000586813 THBS1P07996 1170 aa17.13■□□□□ 0.33
TRAF4-216ENST00000586813 COX5AP20674 150 aa17.13■□□□□ 0.33
TRAF4-216ENST00000586813 EDNRAP25101 427 aa17.13■□□□□ 0.33
TRAF4-216ENST00000586813 ACVR1BP36896 505 aa17.13■□□□□ 0.33
TRAF4-216ENST00000586813 SERPINB5P36952 375 aa17.13■□□□□ 0.33
TRAF4-216ENST00000586813 SKP2Q13309 424 aa17.13■□□□□ 0.33
TRAF4-216ENST00000586813 PPA1Q15181 289 aa17.13■□□□□ 0.33
TRAF4-216ENST00000586813 BHLHB9Q6PI77 547 aa17.13■□□□□ 0.33
TRAF4-216ENST00000586813 OR2W6PQ8NHA6 318 aa17.13■□□□□ 0.33
TRAF4-216ENST00000586813 ARL8AQ96BM9 186 aa17.13■□□□□ 0.33
TRAF4-216ENST00000586813 REG4Q9BYZ8 158 aa17.13■□□□□ 0.33
TRAF4-216ENST00000586813 ZDHHC2Q9UIJ5 367 aa17.13■□□□□ 0.33
TRAF4-216ENST00000586813 KCNE5Q9UJ90 142 aa17.13■□□□□ 0.33
TRAF4-216ENST00000586813 CUBNO60494 3623 aa17.13■□□□□ 0.33
TRAF4-216ENST00000586813 ABCA1O95477 2261 aa17.12■□□□□ 0.33
TRAF4-216ENST00000586813 CENPVL1A0A0U1RR11 272 aa17.12■□□□□ 0.33
TRAF4-216ENST00000586813 ZNF724A8MTY0 619 aa17.12■□□□□ 0.33
TRAF4-216ENST00000586813 RAMP1O60894 148 aa17.12■□□□□ 0.33
TRAF4-216ENST00000586813 SPAG7O75391 227 aa17.12■□□□□ 0.33
TRAF4-216ENST00000586813 CYP7B1O75881 506 aa17.12■□□□□ 0.33
TRAF4-216ENST00000586813 AK1P00568 194 aa17.12■□□□□ 0.33
TRAF4-216ENST00000586813 IGHV4-39P01824 125 aa17.12■□□□□ 0.33
TRAF4-216ENST00000586813 FESP07332 822 aa17.12■□□□□ 0.33
TRAF4-216ENST00000586813 IGHV1-2P23083 117 aa17.12■□□□□ 0.33
TRAF4-216ENST00000586813 C21orf58P58505 322 aa17.12■□□□□ 0.33
TRAF4-216ENST00000586813 GPR68Q15743 365 aa17.12■□□□□ 0.33
TRAF4-216ENST00000586813 ZNF141Q15928 474 aa17.12■□□□□ 0.33
TRAF4-216ENST00000586813 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.12■□□□□ 0.33
TRAF4-216ENST00000586813 RIBC1Q8N443 379 aaPredicted RBP17.12■□□□□ 0.33
TRAF4-216ENST00000586813 ST8SIA1Q92185 356 aa17.12■□□□□ 0.33
TRAF4-216ENST00000586813 ZNF75CPQ92670 426 aaPredicted RBP17.12■□□□□ 0.33
TRAF4-216ENST00000586813 TUBGCP3Q96CW5 907 aa17.12■□□□□ 0.33
TRAF4-216ENST00000586813 TRAF4Q9BUZ4 470 aaPredicted RBP17.12■□□□□ 0.33
TRAF4-216ENST00000586813 THUMPD3Q9BV44 507 aaKnown RBP17.12■□□□□ 0.33
TRAF4-216ENST00000586813 LAT2Q9GZY6 243 aa17.12■□□□□ 0.33
TRAF4-216ENST00000586813 ALG2Q9H553 416 aa17.12■□□□□ 0.33
TRAF4-216ENST00000586813 COL6A5A8TX70 2615 aa17.12■□□□□ 0.33
TRAF4-216ENST00000586813 ATRQ13535 2644 aa17.12■□□□□ 0.33
TRAF4-216ENST00000586813 RNF103-CHMP3A0A140T963 221 aa17.11■□□□□ 0.33
TRAF4-216ENST00000586813 DUXAA6NLW8 204 aa17.11■□□□□ 0.33
TRAF4-216ENST00000586813 SHISA9B4DS77 424 aa17.11■□□□□ 0.33
TRAF4-216ENST00000586813 C9JVG2 144 aa17.11■□□□□ 0.33
TRAF4-216ENST00000586813 FCMRO60667 390 aa17.11■□□□□ 0.33
TRAF4-216ENST00000586813 STX11O75558 287 aa17.11■□□□□ 0.33
TRAF4-216ENST00000586813 CSTAP01040 98 aa17.11■□□□□ 0.33
TRAF4-216ENST00000586813 UBTFL6P0CB48 400 aaPredicted RBP17.11■□□□□ 0.33
TRAF4-216ENST00000586813 G6PDP11413 515 aa17.11■□□□□ 0.33
TRAF4-216ENST00000586813 MATN1P21941 496 aa17.11■□□□□ 0.33
TRAF4-216ENST00000586813 DIO1P49895 249 aa17.11■□□□□ 0.33
TRAF4-216ENST00000586813 SESN3P58005 492 aa17.11■□□□□ 0.33
TRAF4-216ENST00000586813 TIMM23BQ5SRD1 257 aa17.11■□□□□ 0.33
TRAF4-216ENST00000586813 DNM1P46Q6ZS02 220 aa17.11■□□□□ 0.33
TRAF4-216ENST00000586813 CLECL1Q8IZS7 167 aa17.11■□□□□ 0.33
TRAF4-216ENST00000586813 CLEC4FQ8N1N0 589 aa17.11■□□□□ 0.33
TRAF4-216ENST00000586813 TCP10LQ8TDR4 215 aa17.11■□□□□ 0.33
TRAF4-216ENST00000586813 TMEM234Q8WY98 164 aa17.11■□□□□ 0.33
TRAF4-216ENST00000586813 ZNF775Q96BV0 537 aaPredicted RBP17.11■□□□□ 0.33
TRAF4-216ENST00000586813 MUCL1Q96DR8 90 aa17.11■□□□□ 0.33
TRAF4-216ENST00000586813 ZNF350Q9GZX5 532 aa17.11■□□□□ 0.33
TRAF4-216ENST00000586813 SERINC1Q9NRX5 453 aa17.11■□□□□ 0.33
TRAF4-216ENST00000586813 CISD1Q9NZ45 108 aaKnown RBP17.11■□□□□ 0.33
TRAF4-216ENST00000586813 NPAP1Q9NZP6 1156 aa17.11■□□□□ 0.33
TRAF4-216ENST00000586813 ADAM11O75078 769 aa17.1■□□□□ 0.33
TRAF4-216ENST00000586813 NDUFS7O75251 213 aa17.1■□□□□ 0.33
TRAF4-216ENST00000586813 UGT2B17O75795 530 aa17.1■□□□□ 0.33
TRAF4-216ENST00000586813 CD8AP01732 235 aa17.1■□□□□ 0.33
TRAF4-216ENST00000586813 TP53P04637 393 aaPredicted RBP17.1■□□□□ 0.33
TRAF4-216ENST00000586813 GGT1P19440 569 aa17.1■□□□□ 0.33
TRAF4-216ENST00000586813 CDH11P55287 796 aa17.1■□□□□ 0.33
TRAF4-216ENST00000586813 MERTKQ12866 999 aa17.1■□□□□ 0.33
TRAF4-216ENST00000586813 PGS1Q32NB8 556 aa17.1■□□□□ 0.33
TRAF4-216ENST00000586813 ARHGAP11BQ3KRB8 267 aa17.1■□□□□ 0.33
TRAF4-216ENST00000586813 SYT14P1Q58G82 188 aa17.1■□□□□ 0.33
TRAF4-216ENST00000586813 ABLIM2Q6H8Q1 611 aa17.1■□□□□ 0.33
TRAF4-216ENST00000586813 TMPPEQ6ZT21 453 aa17.1■□□□□ 0.33
TRAF4-216ENST00000586813 SSX8Q7RTT4 187 aa17.1■□□□□ 0.33
TRAF4-216ENST00000586813 OLIG3Q7RTU3 272 aa17.1■□□□□ 0.33
TRAF4-216ENST00000586813 C6orf120Q7Z4R8 191 aa17.1■□□□□ 0.33
TRAF4-216ENST00000586813 GALNT5Q7Z7M9 940 aa17.1■□□□□ 0.33
TRAF4-216ENST00000586813 DTX2Q86UW9 622 aa17.1■□□□□ 0.33
TRAF4-216ENST00000586813 P2RY8Q86VZ1 359 aa17.1■□□□□ 0.33
TRAF4-216ENST00000586813 ZNF100Q8IYN0 542 aa17.1■□□□□ 0.33
TRAF4-216ENST00000586813 SPATA3Q8NHX4 192 aa17.1■□□□□ 0.33
TRAF4-216ENST00000586813 SLC25A43Q8WUT9 341 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms