RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 TOMM34Q15785 309 aaPredicted RBP18.5■□□□□ 0.55
CIRBP-209ENST00000586555 CTU2Q2VPK5 515 aaKnown RBP18.5■□□□□ 0.55
CIRBP-209ENST00000586555 AGKQ53H12 422 aa18.5■□□□□ 0.55
CIRBP-209ENST00000586555 SLC2A7Q6PXP3 512 aa18.5■□□□□ 0.55
CIRBP-209ENST00000586555 WDR60Q8WVS4 1066 aa18.5■□□□□ 0.55
CIRBP-209ENST00000586555 CPNE4Q96A23 557 aaPredicted RBP18.5■□□□□ 0.55
CIRBP-209ENST00000586555 ADGRG7Q96K78 797 aa18.5■□□□□ 0.55
CIRBP-209ENST00000586555 KLHDC3Q9BQ90 382 aa18.5■□□□□ 0.55
CIRBP-209ENST00000586555 SLC38A1Q9H2H9 487 aa18.5■□□□□ 0.55
CIRBP-209ENST00000586555 EXOSC3Q9NQT5 275 aaKnown RBP18.5■□□□□ 0.55
CIRBP-209ENST00000586555 SLC6A13Q9NSD5 602 aa18.5■□□□□ 0.55
CIRBP-209ENST00000586555 DCTN4Q9UJW0 460 aa18.5■□□□□ 0.55
CIRBP-209ENST00000586555 EMC9Q9Y3B6 208 aa18.5■□□□□ 0.55
CIRBP-209ENST00000586555 CENPVL1A0A0U1RR11 272 aa18.49■□□□□ 0.55
CIRBP-209ENST00000586555 TUBAL3A6NHL2 446 aa18.49■□□□□ 0.55
CIRBP-209ENST00000586555 A8MXE2 369 aa18.49■□□□□ 0.55
CIRBP-209ENST00000586555 CLIC1O00299 241 aa18.49■□□□□ 0.55
CIRBP-209ENST00000586555 C1QCP02747 245 aa18.49■□□□□ 0.55
CIRBP-209ENST00000586555 ETFAP13804 333 aa18.49■□□□□ 0.55
CIRBP-209ENST00000586555 UQCRBP14927 111 aa18.49■□□□□ 0.55
CIRBP-209ENST00000586555 PPIBP23284 216 aaKnown RBP18.49■□□□□ 0.55
CIRBP-209ENST00000586555 SLC7A1P30825 629 aa18.49■□□□□ 0.55
CIRBP-209ENST00000586555 CTBP2P56545 445 aa18.49■□□□□ 0.55
CIRBP-209ENST00000586555 FADDQ13158 208 aa18.49■□□□□ 0.55
CIRBP-209ENST00000586555 TMEM176BQ3YBM2 270 aaPredicted RBP18.49■□□□□ 0.55
CIRBP-209ENST00000586555 FAM214BQ7L5A3 538 aa18.49■□□□□ 0.55
CIRBP-209ENST00000586555 FUNDC1Q8IVP5 155 aa18.49■□□□□ 0.55
CIRBP-209ENST00000586555 ATP6V1C2Q8NEY4 427 aa18.49■□□□□ 0.55
CIRBP-209ENST00000586555 FAM222BQ8WU58 562 aa18.49■□□□□ 0.55
CIRBP-209ENST00000586555 ZG16BQ96DA0 208 aa18.49■□□□□ 0.55
CIRBP-209ENST00000586555 THOC1Q96FV9 657 aaKnown RBP18.49■□□□□ 0.55
CIRBP-209ENST00000586555 GMPPAQ96IJ6 420 aaPredicted RBP18.49■□□□□ 0.55
CIRBP-209ENST00000586555 PAIP1Q9H074 479 aaKnown RBP18.49■□□□□ 0.55
CIRBP-209ENST00000586555 ARMC7Q9H6L4 198 aa18.49■□□□□ 0.55
CIRBP-209ENST00000586555 ZNF446Q9NWS9 450 aa18.49■□□□□ 0.55
CIRBP-209ENST00000586555 ZNF232Q9UNY5 417 aa18.49■□□□□ 0.55
CIRBP-209ENST00000586555 SPIN1Q9Y657 262 aaPredicted RBP18.49■□□□□ 0.55
CIRBP-209ENST00000586555 A0A0G2JND7 137 aa18.48■□□□□ 0.55
CIRBP-209ENST00000586555 FAM221AA4D161 298 aa18.48■□□□□ 0.55
CIRBP-209ENST00000586555 ETV2O00321 342 aaPredicted RBP18.48■□□□□ 0.55
CIRBP-209ENST00000586555 CTAG2O75638 210 aa18.48■□□□□ 0.55
CIRBP-209ENST00000586555 NTN1O95631 604 aa18.48■□□□□ 0.55
CIRBP-209ENST00000586555 BCHEP06276 602 aa18.48■□□□□ 0.55
CIRBP-209ENST00000586555 CHRM4P08173 479 aa18.48■□□□□ 0.55
CIRBP-209ENST00000586555 TROVE2P10155 538 aaKnown RBP eCLIP18.48■□□□□ 0.55
CIRBP-209ENST00000586555 IL11P20809 199 aa18.48■□□□□ 0.55
CIRBP-209ENST00000586555 FKBP2P26885 142 aaKnown RBP18.48■□□□□ 0.55
CIRBP-209ENST00000586555 RYKP34925 604 aa18.48■□□□□ 0.55
CIRBP-209ENST00000586555 APOBEC1P41238 236 aaKnown RBP18.48■□□□□ 0.55
CIRBP-209ENST00000586555 MVDP53602 400 aa18.48■□□□□ 0.55
CIRBP-209ENST00000586555 SESN3P58005 492 aa18.48■□□□□ 0.55
CIRBP-209ENST00000586555 SIRPAP78324 504 aa18.48■□□□□ 0.55
CIRBP-209ENST00000586555 RGNQ15493 299 aa18.48■□□□□ 0.55
CIRBP-209ENST00000586555 ZSWIM7Q19AV6 140 aa18.48■□□□□ 0.55
CIRBP-209ENST00000586555 METTL21CQ5VZV1 264 aa18.48■□□□□ 0.55
CIRBP-209ENST00000586555 C3orf33Q6P1S2 294 aa18.48■□□□□ 0.55
CIRBP-209ENST00000586555 TMEM200AQ86VY9 491 aa18.48■□□□□ 0.55
CIRBP-209ENST00000586555 FAM71CQ8NEG0 241 aa18.48■□□□□ 0.55
CIRBP-209ENST00000586555 STARD4Q96DR4 205 aa18.48■□□□□ 0.55
CIRBP-209ENST00000586555 AURKBQ96GD4 344 aaPredicted RBP18.48■□□□□ 0.55
CIRBP-209ENST00000586555 SLC39A3Q9BRY0 314 aa18.48■□□□□ 0.55
CIRBP-209ENST00000586555 QRSL1Q9H0R6 528 aaKnown RBP18.48■□□□□ 0.55
CIRBP-209ENST00000586555 MED4Q9NPJ6 270 aa18.48■□□□□ 0.55
CIRBP-209ENST00000586555 ACER3Q9NUN7 267 aa18.48■□□□□ 0.55
CIRBP-209ENST00000586555 MRGBPQ9NV56 204 aa18.48■□□□□ 0.55
CIRBP-209ENST00000586555 PRDM4Q9UKN5 801 aa18.48■□□□□ 0.55
CIRBP-209ENST00000586555 PROCRQ9UNN8 238 aa18.48■□□□□ 0.55
CIRBP-209ENST00000586555 CORO2BQ9UQ03 480 aa18.48■□□□□ 0.55
CIRBP-209ENST00000586555 A0A0G2JPF8 293 aa18.47■□□□□ 0.55
CIRBP-209ENST00000586555 A0A1W2PP18 115 aa18.47■□□□□ 0.55
CIRBP-209ENST00000586555 HNRNPCL2B2RXH8 293 aa18.47■□□□□ 0.55
CIRBP-209ENST00000586555 HNRNPCL3B7ZW38 293 aa18.47■□□□□ 0.55
CIRBP-209ENST00000586555 EFNA2O43921 213 aa18.47■□□□□ 0.55
CIRBP-209ENST00000586555 HNRNPCL1O60812 293 aaKnown RBP18.47■□□□□ 0.55
CIRBP-209ENST00000586555 AQP8O94778 261 aa18.47■□□□□ 0.55
CIRBP-209ENST00000586555 TFPTP0C1Z6 253 aa18.47■□□□□ 0.55
CIRBP-209ENST00000586555 HNRNPCL4P0DMR1 293 aa18.47■□□□□ 0.55
CIRBP-209ENST00000586555 CD8BP10966 210 aa18.47■□□□□ 0.55
CIRBP-209ENST00000586555 DNAJA1P31689 397 aaKnown RBP18.47■□□□□ 0.55
CIRBP-209ENST00000586555 KIR2DL2P43627 348 aaPredicted RBP18.47■□□□□ 0.55
CIRBP-209ENST00000586555 HTR3AP46098 478 aa18.47■□□□□ 0.55
CIRBP-209ENST00000586555 MERTKQ12866 999 aa18.47■□□□□ 0.55
CIRBP-209ENST00000586555 GTDC1Q4AE62 458 aa18.47■□□□□ 0.55
CIRBP-209ENST00000586555 LRIF1Q5T3J3 769 aa18.47■□□□□ 0.55
CIRBP-209ENST00000586555 ZZZ3Q8IYH5 903 aa18.47■□□□□ 0.55
CIRBP-209ENST00000586555 ZNF440Q8IYI8 595 aa18.47■□□□□ 0.55
CIRBP-209ENST00000586555 SLC25A43Q8WUT9 341 aaPredicted RBP18.47■□□□□ 0.55
CIRBP-209ENST00000586555 SLC38A5Q8WUX1 472 aa18.47■□□□□ 0.55
CIRBP-209ENST00000586555 FANCFQ9NPI8 374 aa18.47■□□□□ 0.55
CIRBP-209ENST00000586555 GALNT8Q9NY28 637 aa18.47■□□□□ 0.55
CIRBP-209ENST00000586555 ELOVL5Q9NYP7 299 aa18.47■□□□□ 0.55
CIRBP-209ENST00000586555 CRIM1Q9NZV1 1036 aa18.47■□□□□ 0.55
CIRBP-209ENST00000586555 NDRG3Q9UGV2 375 aa18.47■□□□□ 0.55
CIRBP-209ENST00000586555 MAP1AP78559 2803 aaPredicted RBP18.46■□□□□ 0.55
CIRBP-209ENST00000586555 MED12LQ86YW9 2145 aa18.46■□□□□ 0.55
CIRBP-209ENST00000586555 C5orf58C9J3I9 102 aa18.46■□□□□ 0.55
CIRBP-209ENST00000586555 NID1P14543 1247 aa18.46■□□□□ 0.55
CIRBP-209ENST00000586555 CD1EP15812 388 aa18.46■□□□□ 0.55
CIRBP-209ENST00000586555 CPOXP36551 454 aa18.46■□□□□ 0.55
CIRBP-209ENST00000586555 PCYT1AP49585 367 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms