RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 PNMTP11086 282 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 CKMT1AP12532 417 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 TBXA2RP21731 343 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 OPRL1P41146 370 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 SLC6A8P48029 635 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 LIMK1P53667 647 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 GAS1P54826 345 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 SRSF5Q13243 272 aaKnown RBP10.36□□□□□ -0.75
LIG3-204ENST00000585740 COL9A2Q14055 689 aaPredicted RBP10.36□□□□□ -0.75
LIG3-204ENST00000585740 ST3GAL2Q16842 350 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 ZNF404Q494X3 552 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 PLK5Q496M5 336 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 PEAR1Q5VY43 1037 aaPredicted RBP10.36□□□□□ -0.75
LIG3-204ENST00000585740 WBP2NLQ6ICG8 309 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 RHBDD2Q6NTF9 364 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 ARHGAP11AQ6P4F7 1023 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 TUBA3EQ6PEY2 450 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 HSDL2Q6YN16 418 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 RTL4Q6ZR62 310 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 CXXC5Q7LFL8 322 aaKnown RBP10.36□□□□□ -0.75
LIG3-204ENST00000585740 SLC29A4Q7RTT9 530 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 BCDIN3DQ7Z5W3 292 aaKnown RBP10.36□□□□□ -0.75
LIG3-204ENST00000585740 ATCAYQ86WG3 371 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 CADM2Q8N3J6 435 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 FAM71CQ8NEG0 241 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 OR4D9Q8NGE8 314 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 MCFD2Q8NI22 146 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 CEP76Q8TAP6 659 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 SLC2A12Q8TD20 617 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 SAP25Q8TEE9 199 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 ZNF721Q8TF20 911 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.36□□□□□ -0.75
LIG3-204ENST00000585740 RPL3LQ92901 407 aaKnown RBP10.36□□□□□ -0.75
LIG3-204ENST00000585740 TSLPQ969D9 159 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 SGTBQ96EQ0 304 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 HSPBAP1Q96EW2 488 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 NUDT22Q9BRQ3 303 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 CHCHD6Q9BRQ6 235 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 OR8D2Q9GZM6 311 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 TGIF2Q9GZN2 237 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 SLIRPQ9GZT3 109 aaKnown RBP10.36□□□□□ -0.75
LIG3-204ENST00000585740 NXF2Q9GZY0 626 aaKnown RBP10.36□□□□□ -0.75
LIG3-204ENST00000585740 OR51E2Q9H255 320 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 C12orf10Q9HB07 376 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 AKIP1Q9NQ31 210 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 CMC2Q9NRP2 79 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 INPP5EQ9NRR6 644 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 TAS2R16Q9NYV7 291 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 CLEC2DQ9UHP7 191 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 STUB1Q9UNE7 303 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 SSR3Q9UNL2 185 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 SIGLEC7Q9Y286 467 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 OTOGLQ3ZCN5 2332 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 HEATR5AQ86XA9 2040 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 SPTBN2O15020 2390 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 A0A087WUJ7 227 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 C2orf92A0A1B0GVN3 265 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 OR2W5A6NFC9 320 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 RIIAD1A6NNX1 92 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 A8MUA0 341 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 FOXD2O60548 495 aaPredicted RBP10.35□□□□□ -0.75
LIG3-204ENST00000585740 UTS2O95399 124 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 CH25HO95992 272 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 NGFRP08138 427 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 TSPAN19P0C672 248 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 ZGLP1P0C6A0 271 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 UBL4AP11441 157 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 CPEP16870 476 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 ZNF12P17014 697 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 HK1P19367 917 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 PAICSP22234 425 aaKnown RBP10.35□□□□□ -0.75
LIG3-204ENST00000585740 IL12BP29460 328 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 ETV5P41161 510 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 CAPZA2P47755 286 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 ETV1P50549 477 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 DUSP3P51452 185 aaPredicted RBP10.35□□□□□ -0.75
LIG3-204ENST00000585740 MLLT10P55197 1068 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 NSDHLQ15738 373 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 SSX1Q16384 188 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 FNDC7Q5VTL7 733 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 TSSK4Q6SA08 328 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 KIRREL2Q6UWL6 708 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 MEPCEQ7L2J0 689 aaKnown RBP10.35□□□□□ -0.75
LIG3-204ENST00000585740 ARHGAP22Q7Z5H3 698 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 OAFQ86UD1 273 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 LAPTM4BQ86VI4 370 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 BPHLQ86WA6 291 aaPredicted RBP10.35□□□□□ -0.75
LIG3-204ENST00000585740 KLHL36Q8N4N3 616 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 SLC15A4Q8N697 577 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 TMCO5AQ8N6Q1 288 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 ZSCAN1Q8NBB4 408 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 C17orf47Q8NEP4 570 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 OR1N1Q8NGS0 311 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 OR13C2Q8NGS9 318 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 OR52N1Q8NH53 320 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 FNDC8Q8TC99 324 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 PIGKQ92643 395 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 UFD1Q92890 307 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 ADIPOR1Q96A54 375 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 IFT27Q9BW83 186 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms