RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 TOR1AIP2Q8NFQ8 470 aa12.77□□□□□ -0.37
SDF2-202ENST00000585428 CHMP6Q96FZ7 201 aa12.77□□□□□ -0.37
SDF2-202ENST00000585428 KCNE5Q9UJ90 142 aa12.77□□□□□ -0.37
SDF2-202ENST00000585428 FAF1Q9UNN5 650 aaPredicted RBP12.77□□□□□ -0.37
SDF2-202ENST00000585428 FIS1Q9Y3D6 152 aa12.77□□□□□ -0.37
SDF2-202ENST00000585428 TRAF6Q9Y4K3 522 aa12.77□□□□□ -0.37
SDF2-202ENST00000585428 OR5H1A6NKK0 313 aa12.76□□□□□ -0.37
SDF2-202ENST00000585428 ELOA3DA6NLF2 546 aaPredicted RBP12.76□□□□□ -0.37
SDF2-202ENST00000585428 TMEM114B3SHH9 223 aa12.76□□□□□ -0.37
SDF2-202ENST00000585428 E7EQL1 145 aa12.76□□□□□ -0.37
SDF2-202ENST00000585428 ABCD4O14678 606 aa12.76□□□□□ -0.37
SDF2-202ENST00000585428 H6PDO95479 791 aa12.76□□□□□ -0.37
SDF2-202ENST00000585428 CHEK2O96017 543 aa12.76□□□□□ -0.37
SDF2-202ENST00000585428 KRT4P19013 534 aa12.76□□□□□ -0.37
SDF2-202ENST00000585428 TTKP33981 857 aa12.76□□□□□ -0.37
SDF2-202ENST00000585428 NTF4P34130 210 aa12.76□□□□□ -0.37
SDF2-202ENST00000585428 RPL3P39023 403 aaKnown RBP12.76□□□□□ -0.37
SDF2-202ENST00000585428 DSCR9P59020 149 aa12.76□□□□□ -0.37
SDF2-202ENST00000585428 LOXL1Q08397 574 aaPredicted RBP12.76□□□□□ -0.37
SDF2-202ENST00000585428 CBFBQ13951 182 aa12.76□□□□□ -0.37
SDF2-202ENST00000585428 PCLAFQ15004 111 aa12.76□□□□□ -0.37
SDF2-202ENST00000585428 PDK3Q15120 406 aa12.76□□□□□ -0.37
SDF2-202ENST00000585428 STK11Q15831 433 aa12.76□□□□□ -0.37
SDF2-202ENST00000585428 ZNF141Q15928 474 aa12.76□□□□□ -0.37
SDF2-202ENST00000585428 LSM12Q3MHD2 195 aaKnown RBP12.76□□□□□ -0.37
SDF2-202ENST00000585428 ELOA3BQ3SY89 546 aa12.76□□□□□ -0.37
SDF2-202ENST00000585428 TIGD2Q4W5G0 525 aa12.76□□□□□ -0.37
SDF2-202ENST00000585428 AP1ARQ63HQ0 302 aa12.76□□□□□ -0.37
SDF2-202ENST00000585428 TMPPEQ6ZT21 453 aa12.76□□□□□ -0.37
SDF2-202ENST00000585428 GALNT5Q7Z7M9 940 aa12.76□□□□□ -0.37
SDF2-202ENST00000585428 MTDHQ86UE4 582 aaKnown RBP12.76□□□□□ -0.37
SDF2-202ENST00000585428 CCDC63Q8NA47 563 aa12.76□□□□□ -0.37
SDF2-202ENST00000585428 ELOA3Q8NG57 546 aa12.76□□□□□ -0.37
SDF2-202ENST00000585428 OR56A1Q8NGH5 318 aa12.76□□□□□ -0.37
SDF2-202ENST00000585428 OR5B2Q96R09 309 aa12.76□□□□□ -0.37
SDF2-202ENST00000585428 TNFRSF13CQ96RJ3 184 aa12.76□□□□□ -0.37
SDF2-202ENST00000585428 THUMPD3Q9BV44 507 aaKnown RBP12.76□□□□□ -0.37
SDF2-202ENST00000585428 NMUR2Q9GZQ4 415 aa12.76□□□□□ -0.37
SDF2-202ENST00000585428 LAT2Q9GZY6 243 aa12.76□□□□□ -0.37
SDF2-202ENST00000585428 IGKV3D-15A0A087WSY6 115 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 FAM234BA2RU67 622 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 SERINC4A6NH21 518 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 TMEM233B4DJY2 109 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 COPEO14579 308 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 PIP5K1BO14986 540 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 FCMRO60667 390 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 PEX11AO75192 247 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 ABCA1O95477 2261 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 C6orf47O95873 294 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 KRT16P08779 473 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 FAM157CP0CG43 387 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 UBL4AP11441 157 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 SONP18583 2426 aaKnown RBP12.75□□□□□ -0.37
SDF2-202ENST00000585428 DIO1P49895 249 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 CDH11P55287 796 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 SESN3P58005 492 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 SKP2Q13309 424 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 TP53BP2Q13625 1128 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 PDZK1Q5T2W1 519 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 C6orf52Q5T4I8 152 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 FBXW9Q5XUX1 488 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 C3orf33Q6P1S2 294 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 RIMKLAQ8IXN7 391 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 DDIASQ8IXT1 998 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 ZNF100Q8IYN0 542 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 RFWD2Q8NHY2 731 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 TWIST2Q8WVJ9 160 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 ST8SIA1Q92185 356 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 ARL8AQ96BM9 186 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 PPP3R2Q96LZ3 170 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 C3orf30Q96M34 536 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 ADAD1Q96M93 576 aaKnown RBP12.75□□□□□ -0.37
SDF2-202ENST00000585428 MUS81Q96NY9 551 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 OR7D2Q96RA2 312 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 DHRS9Q9BPW9 319 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 QRSL1Q9H0R6 528 aaKnown RBP12.75□□□□□ -0.37
SDF2-202ENST00000585428 CBLN4Q9NTU7 201 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 TMEM160Q9NX00 188 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 GIMAP2Q9UG22 337 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 MGAT4BQ9UQ53 548 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 SLC25A15Q9Y619 301 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 STAB1Q9NY15 2570 aa12.75□□□□□ -0.37
SDF2-202ENST00000585428 ZNF716A6NP11 495 aa12.74□□□□□ -0.37
SDF2-202ENST00000585428 LYPLA1O75608 230 aaPredicted RBP12.74□□□□□ -0.37
SDF2-202ENST00000585428 CHRNGP07510 517 aa12.74□□□□□ -0.37
SDF2-202ENST00000585428 PTAFRP25105 342 aa12.74□□□□□ -0.37
SDF2-202ENST00000585428 MAPK1P28482 360 aa12.74□□□□□ -0.37
SDF2-202ENST00000585428 HPCAL1P37235 193 aa12.74□□□□□ -0.37
SDF2-202ENST00000585428 VLDLRP98155 873 aa12.74□□□□□ -0.37
SDF2-202ENST00000585428 PTGR1Q14914 329 aa12.74□□□□□ -0.37
SDF2-202ENST00000585428 TMEM249Q2WGJ8 235 aa12.74□□□□□ -0.37
SDF2-202ENST00000585428 XKR7Q5GH72 579 aa12.74□□□□□ -0.37
SDF2-202ENST00000585428 C6orf136Q5SQH8 315 aa12.74□□□□□ -0.37
SDF2-202ENST00000585428 TMEM108Q6UXF1 575 aa12.74□□□□□ -0.37
SDF2-202ENST00000585428 OR2W6PQ8NHA6 318 aa12.74□□□□□ -0.37
SDF2-202ENST00000585428 SFXN5Q8TD22 340 aa12.74□□□□□ -0.37
SDF2-202ENST00000585428 MOAP1Q96BY2 351 aa12.74□□□□□ -0.37
SDF2-202ENST00000585428 CACNG6Q9BXT2 260 aa12.74□□□□□ -0.37
SDF2-202ENST00000585428 PPCSQ9HAB8 311 aa12.74□□□□□ -0.37
SDF2-202ENST00000585428 SERINC1Q9NRX5 453 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms