RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 MARK4Q96L34 752 aa11.08□□□□□ -0.64
SS18-225ENST00000585121 TRNT1Q96Q11 434 aaKnown RBP11.08□□□□□ -0.64
SS18-225ENST00000585121 INPP5KQ9BT40 448 aa11.08□□□□□ -0.64
SS18-225ENST00000585121 SAP130Q9H0E3 1048 aa11.08□□□□□ -0.64
SS18-225ENST00000585121 KCNE5Q9UJ90 142 aa11.08□□□□□ -0.64
SS18-225ENST00000585121 TESMINQ9Y4I5 508 aa11.08□□□□□ -0.64
SS18-225ENST00000585121 SPIN1Q9Y657 262 aaPredicted RBP11.08□□□□□ -0.64
SS18-225ENST00000585121 USH1CQ9Y6N9 552 aa11.08□□□□□ -0.64
SS18-225ENST00000585121 ABCA4P78363 2273 aa11.07□□□□□ -0.64
SS18-225ENST00000585121 TMEM247A6NEH6 219 aa11.07□□□□□ -0.64
SS18-225ENST00000585121 PRKD3O94806 890 aa11.07□□□□□ -0.64
SS18-225ENST00000585121 TGDSO95455 350 aa11.07□□□□□ -0.64
SS18-225ENST00000585121 H6PDO95479 791 aa11.07□□□□□ -0.64
SS18-225ENST00000585121 NR2F1P10589 423 aa11.07□□□□□ -0.64
SS18-225ENST00000585121 SESN3P58005 492 aa11.07□□□□□ -0.64
SS18-225ENST00000585121 KCNJ10P78508 379 aa11.07□□□□□ -0.64
SS18-225ENST00000585121 MERTKQ12866 999 aa11.07□□□□□ -0.64
SS18-225ENST00000585121 TESK1Q15569 626 aa11.07□□□□□ -0.64
SS18-225ENST00000585121 TIGD2Q4W5G0 525 aa11.07□□□□□ -0.64
SS18-225ENST00000585121 AP1ARQ63HQ0 302 aa11.07□□□□□ -0.64
SS18-225ENST00000585121 FRRS1Q6ZNA5 592 aa11.07□□□□□ -0.64
SS18-225ENST00000585121 LRRC74BQ6ZQY2 392 aa11.07□□□□□ -0.64
SS18-225ENST00000585121 BEND4Q6ZU67 534 aa11.07□□□□□ -0.64
SS18-225ENST00000585121 FCRLAQ7L513 359 aa11.07□□□□□ -0.64
SS18-225ENST00000585121 PMM1Q92871 262 aa11.07□□□□□ -0.64
SS18-225ENST00000585121 C7orf26Q96N11 449 aa11.07□□□□□ -0.64
SS18-225ENST00000585121 WFIKKN1Q96NZ8 548 aa11.07□□□□□ -0.64
SS18-225ENST00000585121 TACO1Q9BSH4 297 aaKnown RBP11.07□□□□□ -0.64
SS18-225ENST00000585121 MTHFD2LQ9H903 347 aaPredicted RBP11.07□□□□□ -0.64
SS18-225ENST00000585121 CACYBPQ9HB71 228 aaKnown RBP11.07□□□□□ -0.64
SS18-225ENST00000585121 GP6Q9HCN6 339 aa11.07□□□□□ -0.64
SS18-225ENST00000585121 SDR39U1Q9NRG7 319 aaPredicted RBP11.07□□□□□ -0.64
SS18-225ENST00000585121 CCM2LQ9NUG4 571 aaPredicted RBP11.07□□□□□ -0.64
SS18-225ENST00000585121 ACER3Q9NUN7 267 aa11.07□□□□□ -0.64
SS18-225ENST00000585121 KLHL28Q9NXS3 571 aa11.07□□□□□ -0.64
SS18-225ENST00000585121 PLEKHA6Q9Y2H5 1048 aa11.07□□□□□ -0.64
SS18-225ENST00000585121 TEP1Q99973 2627 aaKnown RBP11.06□□□□□ -0.64
SS18-225ENST00000585121 CENPVL1A0A0U1RR11 272 aa11.06□□□□□ -0.64
SS18-225ENST00000585121 ETV2O00321 342 aaPredicted RBP11.06□□□□□ -0.64
SS18-225ENST00000585121 EFNA2O43921 213 aa11.06□□□□□ -0.64
SS18-225ENST00000585121 DNAJA2O60884 412 aa11.06□□□□□ -0.64
SS18-225ENST00000585121 NTN1O95631 604 aa11.06□□□□□ -0.64
SS18-225ENST00000585121 HRGP04196 525 aa11.06□□□□□ -0.64
SS18-225ENST00000585121 PPP3CBP16298 524 aa11.06□□□□□ -0.64
SS18-225ENST00000585121 FKBP2P26885 142 aaKnown RBP11.06□□□□□ -0.64
SS18-225ENST00000585121 SHC1P29353 583 aa11.06□□□□□ -0.64
SS18-225ENST00000585121 RYKP34925 604 aa11.06□□□□□ -0.64
SS18-225ENST00000585121 PGM1P36871 562 aa11.06□□□□□ -0.64
SS18-225ENST00000585121 APOBEC1P41238 236 aaKnown RBP11.06□□□□□ -0.64
SS18-225ENST00000585121 CDKN2CP42773 168 aa11.06□□□□□ -0.64
SS18-225ENST00000585121 POLR2JP52435 117 aaKnown RBP11.06□□□□□ -0.64
SS18-225ENST00000585121 RAC3P60763 192 aa11.06□□□□□ -0.64
SS18-225ENST00000585121 CHRNEQ04844 493 aa11.06□□□□□ -0.64
SS18-225ENST00000585121 KEAP1Q14145 624 aa11.06□□□□□ -0.64
SS18-225ENST00000585121 POU4F3Q15319 338 aa11.06□□□□□ -0.64
SS18-225ENST00000585121 MAPK14Q16539 360 aa11.06□□□□□ -0.64
SS18-225ENST00000585121 EPGNQ6UW88 154 aa11.06□□□□□ -0.64
SS18-225ENST00000585121 CMIPQ8IY22 773 aa11.06□□□□□ -0.64
SS18-225ENST00000585121 ANKFN1Q8N957 763 aa11.06□□□□□ -0.64
SS18-225ENST00000585121 PNPT1Q8TCS8 783 aaKnown RBP11.06□□□□□ -0.64
SS18-225ENST00000585121 RNF128Q8TEB7 428 aa11.06□□□□□ -0.64
SS18-225ENST00000585121 SLC25A43Q8WUT9 341 aaPredicted RBP11.06□□□□□ -0.64
SS18-225ENST00000585121 OR5B2Q96R09 309 aa11.06□□□□□ -0.64
SS18-225ENST00000585121 OR52B2Q96RD2 323 aa11.06□□□□□ -0.64
SS18-225ENST00000585121 FOXC2Q99958 501 aa11.06□□□□□ -0.64
SS18-225ENST00000585121 SRXN1Q9BYN0 137 aa11.06□□□□□ -0.64
SS18-225ENST00000585121 QRSL1Q9H0R6 528 aaKnown RBP11.06□□□□□ -0.64
SS18-225ENST00000585121 C12orf49Q9H741 205 aa11.06□□□□□ -0.64
SS18-225ENST00000585121 EXOSC3Q9NQT5 275 aaKnown RBP11.06□□□□□ -0.64
SS18-225ENST00000585121 THUMPD1Q9NXG2 353 aaKnown RBP11.06□□□□□ -0.64
SS18-225ENST00000585121 CALML5Q9NZT1 146 aa11.06□□□□□ -0.64
SS18-225ENST00000585121 F8P00451 2351 aa11.06□□□□□ -0.64
SS18-225ENST00000585121 FAM234BA2RU67 622 aa11.05□□□□□ -0.64
SS18-225ENST00000585121 RAF1P04049 648 aa11.05□□□□□ -0.64
SS18-225ENST00000585121 YES1P07947 543 aa11.05□□□□□ -0.64
SS18-225ENST00000585121 TFPIP10646 304 aa11.05□□□□□ -0.64
SS18-225ENST00000585121 UQCRBP14927 111 aa11.05□□□□□ -0.64
SS18-225ENST00000585121 IL7RP16871 459 aa11.05□□□□□ -0.64
SS18-225ENST00000585121 ENPP1P22413 925 aa11.05□□□□□ -0.64
SS18-225ENST00000585121 AGTR1P30556 359 aa11.05□□□□□ -0.64
SS18-225ENST00000585121 CRATP43155 626 aa11.05□□□□□ -0.64
SS18-225ENST00000585121 HTR3AP46098 478 aa11.05□□□□□ -0.64
SS18-225ENST00000585121 CSNK2A1P68400 391 aaPredicted RBP11.05□□□□□ -0.64
SS18-225ENST00000585121 FUT5Q11128 374 aa11.05□□□□□ -0.64
SS18-225ENST00000585121 SYPL1Q16563 259 aa11.05□□□□□ -0.64
SS18-225ENST00000585121 C6orf10Q5SRN2 563 aa11.05□□□□□ -0.64
SS18-225ENST00000585121 PAMR1Q6UXH9 720 aa11.05□□□□□ -0.64
SS18-225ENST00000585121 PLEKHM3Q6ZWE6 761 aa11.05□□□□□ -0.64
SS18-225ENST00000585121 MAVSQ7Z434 540 aa11.05□□□□□ -0.64
SS18-225ENST00000585121 PEX5LQ8IYB4 626 aa11.05□□□□□ -0.64
SS18-225ENST00000585121 FAM71CQ8NEG0 241 aa11.05□□□□□ -0.64
SS18-225ENST00000585121 ZC3HAV1LQ96H79 300 aaKnown RBP11.05□□□□□ -0.64
SS18-225ENST00000585121 LIME1Q9H400 295 aa11.05□□□□□ -0.64
SS18-225ENST00000585121 COQ10BQ9H8M1 238 aa11.05□□□□□ -0.64
SS18-225ENST00000585121 TCF7L2Q9NQB0 619 aa11.05□□□□□ -0.64
SS18-225ENST00000585121 KLHL9Q9P2J3 617 aa11.05□□□□□ -0.64
SS18-225ENST00000585121 P2RX2Q9UBL9 471 aa11.05□□□□□ -0.64
SS18-225ENST00000585121 A0A1W2PNR3 127 aa11.04□□□□□ -0.64
SS18-225ENST00000585121 PRAMEF27A3QJZ7 478 aa11.04□□□□□ -0.64
SS18-225ENST00000585121 AGAP5A6NIR3 686 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms