RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 HMGN2P46Q86SG4 172 aa14.6□□□□□ -0.07
ERBB2-222ENST00000584908 DHDDSQ86SQ9 333 aa14.6□□□□□ -0.07
ERBB2-222ENST00000584908 OR52P1PQ8NH57 321 aa14.6□□□□□ -0.07
ERBB2-222ENST00000584908 OR10D3Q8NH80 312 aa14.6□□□□□ -0.07
ERBB2-222ENST00000584908 TMEM234Q8WY98 164 aa14.6□□□□□ -0.07
ERBB2-222ENST00000584908 SMPDL3BQ92485 455 aa14.6□□□□□ -0.07
ERBB2-222ENST00000584908 FIG4Q92562 907 aa14.6□□□□□ -0.07
ERBB2-222ENST00000584908 CNOT9Q92600 299 aaKnown RBP14.6□□□□□ -0.07
ERBB2-222ENST00000584908 ZNF845Q96IR2 970 aaPredicted RBP14.6□□□□□ -0.07
ERBB2-222ENST00000584908 KLHL15Q96M94 604 aa14.6□□□□□ -0.07
ERBB2-222ENST00000584908 ANKRD27Q96NW4 1050 aa14.6□□□□□ -0.07
ERBB2-222ENST00000584908 CGREF1Q99674 301 aa14.6□□□□□ -0.07
ERBB2-222ENST00000584908 RNF122Q9H9V4 155 aa14.6□□□□□ -0.07
ERBB2-222ENST00000584908 CDHR4A6H8M9 788 aa14.59□□□□□ -0.07
ERBB2-222ENST00000584908 GJE1A6NN92 205 aa14.59□□□□□ -0.07
ERBB2-222ENST00000584908 EVPLLA8MZ36 301 aa14.59□□□□□ -0.07
ERBB2-222ENST00000584908 SYT5O00445 386 aa14.59□□□□□ -0.07
ERBB2-222ENST00000584908 FBP2O00757 339 aa14.59□□□□□ -0.07
ERBB2-222ENST00000584908 DYNC1I1O14576 645 aa14.59□□□□□ -0.07
ERBB2-222ENST00000584908 SLC22A2O15244 555 aa14.59□□□□□ -0.07
ERBB2-222ENST00000584908 CYP7B1O75881 506 aa14.59□□□□□ -0.07
ERBB2-222ENST00000584908 TNFSF13O75888 250 aa14.59□□□□□ -0.07
ERBB2-222ENST00000584908 FCGR2AP12318 317 aa14.59□□□□□ -0.07
ERBB2-222ENST00000584908 ETS2P15036 469 aa14.59□□□□□ -0.07
ERBB2-222ENST00000584908 KLF10Q13118 480 aa14.59□□□□□ -0.07
ERBB2-222ENST00000584908 PON3Q15166 354 aa14.59□□□□□ -0.07
ERBB2-222ENST00000584908 GUSBP1Q15486 140 aa14.59□□□□□ -0.07
ERBB2-222ENST00000584908 ADRM1Q16186 407 aa14.59□□□□□ -0.07
ERBB2-222ENST00000584908 LIN52Q52LA3 116 aa14.59□□□□□ -0.07
ERBB2-222ENST00000584908 PDSS1Q5T2R2 415 aa14.59□□□□□ -0.07
ERBB2-222ENST00000584908 MRPL2Q5T653 305 aaKnown RBP14.59□□□□□ -0.07
ERBB2-222ENST00000584908 OR2V1Q8NHB1 315 aa14.59□□□□□ -0.07
ERBB2-222ENST00000584908 BBS10Q8TAM1 723 aa14.59□□□□□ -0.07
ERBB2-222ENST00000584908 FNDC9Q8TBE3 224 aa14.59□□□□□ -0.07
ERBB2-222ENST00000584908 MAL2Q969L2 176 aa14.59□□□□□ -0.07
ERBB2-222ENST00000584908 MARVELD3Q96A59 401 aa14.59□□□□□ -0.07
ERBB2-222ENST00000584908 INTS12Q96CB8 462 aaKnown RBP14.59□□□□□ -0.07
ERBB2-222ENST00000584908 IFT52Q9Y366 437 aa14.59□□□□□ -0.07
ERBB2-222ENST00000584908 A0A1W2PNV4 684 aa14.58□□□□□ -0.08
ERBB2-222ENST00000584908 PGM3O95394 542 aa14.58□□□□□ -0.08
ERBB2-222ENST00000584908 NPPAP01160 153 aa14.58□□□□□ -0.08
ERBB2-222ENST00000584908 COX6B1P14854 86 aa14.58□□□□□ -0.08
ERBB2-222ENST00000584908 SHC1P29353 583 aa14.58□□□□□ -0.08
ERBB2-222ENST00000584908 APOBEC1P41238 236 aaKnown RBP14.58□□□□□ -0.08
ERBB2-222ENST00000584908 EIF1AXP47813 144 aaKnown RBP14.58□□□□□ -0.08
ERBB2-222ENST00000584908 RPS26P11Q5JNZ5 115 aaPredicted RBP14.58□□□□□ -0.08
ERBB2-222ENST00000584908 GCNT6Q5T4J0 391 aa14.58□□□□□ -0.08
ERBB2-222ENST00000584908 C3orf33Q6P1S2 294 aa14.58□□□□□ -0.08
ERBB2-222ENST00000584908 ZNF836Q6ZNA1 936 aa14.58□□□□□ -0.08
ERBB2-222ENST00000584908 PLEKHM3Q6ZWE6 761 aa14.58□□□□□ -0.08
ERBB2-222ENST00000584908 VRK2Q86Y07 508 aa14.58□□□□□ -0.08
ERBB2-222ENST00000584908 DMRTC2Q8IXT2 367 aaPredicted RBP14.58□□□□□ -0.08
ERBB2-222ENST00000584908 ZNF440Q8IYI8 595 aa14.58□□□□□ -0.08
ERBB2-222ENST00000584908 SLC35B4Q969S0 331 aa14.58□□□□□ -0.08
ERBB2-222ENST00000584908 CCDC106Q9BWC9 280 aa14.58□□□□□ -0.08
ERBB2-222ENST00000584908 SPATA9Q9BWV2 254 aa14.58□□□□□ -0.08
ERBB2-222ENST00000584908 PIGMQ9H3S5 423 aa14.58□□□□□ -0.08
ERBB2-222ENST00000584908 TMEM185BQ9H7F4 350 aa14.58□□□□□ -0.08
ERBB2-222ENST00000584908 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.58□□□□□ -0.08
ERBB2-222ENST00000584908 FOXD3Q9UJU5 478 aaPredicted RBP14.58□□□□□ -0.08
ERBB2-222ENST00000584908 ZNF443Q9Y2A4 671 aaPredicted RBP14.58□□□□□ -0.08
ERBB2-222ENST00000584908 CHST2Q9Y4C5 530 aa14.58□□□□□ -0.08
ERBB2-222ENST00000584908 BBIP1A8MTZ0 92 aa14.57□□□□□ -0.08
ERBB2-222ENST00000584908 TNFSF11O14788 317 aa14.57□□□□□ -0.08
ERBB2-222ENST00000584908 AQP8O94778 261 aa14.57□□□□□ -0.08
ERBB2-222ENST00000584908 CDK6Q00534 326 aa14.57□□□□□ -0.08
ERBB2-222ENST00000584908 EPS8Q12929 822 aa14.57□□□□□ -0.08
ERBB2-222ENST00000584908 LARS2Q15031 903 aaKnown RBP14.57□□□□□ -0.08
ERBB2-222ENST00000584908 MAPRE2Q15555 327 aa14.57□□□□□ -0.08
ERBB2-222ENST00000584908 SGCBQ16585 318 aa14.57□□□□□ -0.08
ERBB2-222ENST00000584908 TRMT5Q32P41 509 aaKnown RBP14.57□□□□□ -0.08
ERBB2-222ENST00000584908 TMEM176BQ3YBM2 270 aaPredicted RBP14.57□□□□□ -0.08
ERBB2-222ENST00000584908 HBMQ6B0K9 141 aa14.57□□□□□ -0.08
ERBB2-222ENST00000584908 REEP3Q6NUK4 255 aa14.57□□□□□ -0.08
ERBB2-222ENST00000584908 GRINAQ7Z429 371 aa14.57□□□□□ -0.08
ERBB2-222ENST00000584908 P4HA3Q7Z4N8 544 aa14.57□□□□□ -0.08
ERBB2-222ENST00000584908 GCNT2Q8N0V5 402 aa14.57□□□□□ -0.08
ERBB2-222ENST00000584908 SLC25A43Q8WUT9 341 aaPredicted RBP14.57□□□□□ -0.08
ERBB2-222ENST00000584908 OSTF1Q92882 214 aa14.57□□□□□ -0.08
ERBB2-222ENST00000584908 TRIM8Q9BZR9 551 aa14.57□□□□□ -0.08
ERBB2-222ENST00000584908 COQ10BQ9H8M1 238 aa14.57□□□□□ -0.08
ERBB2-222ENST00000584908 MCTS1Q9ULC4 181 aaKnown RBP14.57□□□□□ -0.08
ERBB2-222ENST00000584908 ZNF232Q9UNY5 417 aa14.57□□□□□ -0.08
ERBB2-222ENST00000584908 CFAP73A6NFT4 308 aa14.56□□□□□ -0.08
ERBB2-222ENST00000584908 C5orf58C9J3I9 102 aa14.56□□□□□ -0.08
ERBB2-222ENST00000584908 CXCL13O43927 109 aa14.56□□□□□ -0.08
ERBB2-222ENST00000584908 OPN1LWP04000 364 aa14.56□□□□□ -0.08
ERBB2-222ENST00000584908 PABPC4LP0CB38 370 aaKnown RBP14.56□□□□□ -0.08
ERBB2-222ENST00000584908 FKBP2P26885 142 aaKnown RBP14.56□□□□□ -0.08
ERBB2-222ENST00000584908 RYKP34925 604 aa14.56□□□□□ -0.08
ERBB2-222ENST00000584908 SFTPDP35247 375 aa14.56□□□□□ -0.08
ERBB2-222ENST00000584908 PEX19P40855 299 aa14.56□□□□□ -0.08
ERBB2-222ENST00000584908 ACAA2P42765 397 aaKnown RBP14.56□□□□□ -0.08
ERBB2-222ENST00000584908 SLC1A3P43003 542 aa14.56□□□□□ -0.08
ERBB2-222ENST00000584908 KIR2DL2P43627 348 aaPredicted RBP14.56□□□□□ -0.08
ERBB2-222ENST00000584908 HTR3AP46098 478 aa14.56□□□□□ -0.08
ERBB2-222ENST00000584908 PCYT1AP49585 367 aa14.56□□□□□ -0.08
ERBB2-222ENST00000584908 CARD18P57730 90 aa14.56□□□□□ -0.08
ERBB2-222ENST00000584908 RBBP4Q09028 425 aa14.56□□□□□ -0.08
ERBB2-222ENST00000584908 MERTKQ12866 999 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms