RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 PLCE1Q9P212 2302 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 RNF103-CHMP3A0A140T963 221 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 DEFB108AA8MXU0 73 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 NPIPB9F8W1W9 429 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 ZNF264O43296 627 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 ZNF500O60304 480 aaPredicted RBP9.92□□□□□ -0.82
CCDC47-206ENST00000584112 OPN1LWP04000 364 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 UBL4AP11441 157 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 CLNS1AP54105 237 aaKnown RBP9.92□□□□□ -0.82
CCDC47-206ENST00000584112 STX3Q13277 289 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 CBFBQ13951 182 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 RNPS1Q15287 305 aaKnown RBP9.92□□□□□ -0.82
CCDC47-206ENST00000584112 ZNF239Q16600 458 aaKnown RBP9.92□□□□□ -0.82
CCDC47-206ENST00000584112 EXOC3L2Q2M3D2 409 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 PRR31Q5SQ13 230 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 CEP85LQ5SZL2 805 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.92□□□□□ -0.82
CCDC47-206ENST00000584112 ATAD3BQ5T9A4 648 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 ANXA8L1Q5VT79 327 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 CBLN3Q6UW01 205 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 BEND4Q6ZU67 534 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 IL17RELQ6ZVW7 336 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 ZNF550Q7Z398 422 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 C16orf62Q7Z3J2 963 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 TMCO5AQ8N6Q1 288 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 ARIH2OSQ8N7S6 290 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 OR5D16Q8NGK9 328 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 OR4A15Q8NGL6 344 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 OR5W2Q8NH69 310 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 FBXO27Q8NI29 283 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 GPR119Q8TDV5 335 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 OIT3Q8WWZ8 545 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 OSTF1Q92882 214 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 TESCQ96BS2 214 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 PIK3IP1Q96FE7 263 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 MRGPRX4Q96LA9 322 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 PPP1R36Q96LQ0 422 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 UBTD1Q9HAC8 227 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 KCNK9Q9NPC2 374 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 C6orf203Q9P0P8 240 aaPredicted RBP9.92□□□□□ -0.82
CCDC47-206ENST00000584112 HAO1Q9UJM8 370 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 RAB21Q9UL25 225 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 CLEC4AQ9UMR7 237 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 KCNE3Q9Y6H6 103 aa9.92□□□□□ -0.82
CCDC47-206ENST00000584112 PRSS51A0A1B0GVH4 220 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 ZNF195O14628 629 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 STX11O75558 287 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 PRKCAP17252 672 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 LBPP18428 481 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 FPR1P21462 350 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 BGNP21810 368 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 UQCRC2P22695 453 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 AGTR1P30556 359 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 SLC7A1P30825 629 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 CCR4P51679 360 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 RPS26P62854 115 aaKnown RBP9.91□□□□□ -0.82
CCDC47-206ENST00000584112 SELENBP1Q13228 472 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 VEZF1Q14119 521 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 GPR68Q15743 365 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 ZNF141Q15928 474 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 ARHGAP11BQ3KRB8 267 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 TNFAIP8L3Q5GJ75 292 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 SLC25A53Q5H9E4 307 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 TMEM201Q5SNT2 666 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 PDZK1Q5T2W1 519 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 C6orf52Q5T4I8 152 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 CLECL1Q8IZS7 167 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 RFWD2Q8NHY2 731 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 MIPOL1Q8TD10 442 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 RNF128Q8TEB7 428 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 ZFP90Q8TF47 636 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 ZC3HAV1LQ96H79 300 aaKnown RBP9.91□□□□□ -0.82
CCDC47-206ENST00000584112 SORT1Q99523 831 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 KLHDC3Q9BQ90 382 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 TACO1Q9BSH4 297 aaKnown RBP9.91□□□□□ -0.82
CCDC47-206ENST00000584112 OR10A4Q9H209 315 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 GP6Q9HCN6 339 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 POLE3Q9NRF9 147 aa9.91□□□□□ -0.82
CCDC47-206ENST00000584112 MALRD1Q5VYJ5 2156 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 E9PBE3 544 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 SIAH2O43255 324 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 OIP5O43482 229 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 NTN1O95631 604 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 CPSF4O95639 269 aaKnown RBP9.9□□□□□ -0.82
CCDC47-206ENST00000584112 CSTAP01040 98 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 GUSBP08236 651 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 VSIG8P0DPA2 414 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 PGCP20142 388 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 KHKP50053 298 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 RNF144AP50876 292 aaPredicted RBP9.9□□□□□ -0.82
CCDC47-206ENST00000584112 NDUFAF6Q330K2 333 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 TMEM176BQ3YBM2 270 aaPredicted RBP9.9□□□□□ -0.82
CCDC47-206ENST00000584112 BEX5Q5H9J7 111 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 HHATQ5VTY9 493 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 LIPNQ5VXI9 398 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 OGFOD2Q6N063 350 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 C3orf33Q6P1S2 294 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 STAC2Q6ZMT1 411 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 C20orf204Q6ZNR8 217 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 FCRLAQ7L513 359 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms