RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 EXOSC3Q9NQT5 275 aaKnown RBP11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 SERINC1Q9NRX5 453 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 ACER3Q9NUN7 267 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 MRGBPQ9NV56 204 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 DNAJB12Q9NXW2 375 aaKnown RBP11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 KLHL14Q9P2G3 628 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 MCTS1Q9ULC4 181 aaKnown RBP11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 CORO2BQ9UQ03 480 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 ZNF443Q9Y2A4 671 aaPredicted RBP11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 DSPPQ9NZW4 1301 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 HCFC1P51610 2035 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 TRBV5-3A0A0A0MS03 114 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 A0A1W2PNV4 684 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 AP3D1O14617 1153 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 ADAMDEC1O15204 470 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 EFNA2O43921 213 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 DNAJA2O60884 412 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 SMNDC1O75940 238 aaKnown RBP eCLIP11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 NTN1O95631 604 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 PLGP00747 810 aaPredicted RBP11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 BMP2P12643 396 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 SLC7A1P30825 629 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 CPA2P48052 419 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 IDH2P48735 452 aaKnown RBP11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 CARD18P57730 90 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 EEF1A1P68104 462 aaKnown RBP11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 PLAURQ03405 335 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 KLF10Q13118 480 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 LARS2Q15031 903 aaKnown RBP11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 TMEM176BQ3YBM2 270 aaPredicted RBP11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 EEF1A1P5Q5VTE0 462 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 C3orf33Q6P1S2 294 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 DLEU7Q6UYE1 221 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 ZNF836Q6ZNA1 936 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 PLEKHM3Q6ZWE6 761 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 GDF7Q7Z4P5 450 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 LUZP2Q86TE4 346 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 RETREG3Q86VR2 466 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 C10orf111Q8N326 155 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 DPP10Q8N608 796 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 NFKBIDQ8NI38 313 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 BBS10Q8TAM1 723 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 OSTF1Q92882 214 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 RNASE6Q93091 150 aaKnown RBP11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 ZNF317Q96PQ6 595 aaPredicted RBP11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 CPPED1Q9BRF8 314 aaPredicted RBP11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 IKZF5Q9H5V7 419 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 RNF122Q9H9V4 155 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 TIGARQ9NQ88 270 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 SAR1AQ9NR31 198 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 RLIMQ9NVW2 624 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 PACSIN3Q9UKS6 424 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 ZNF232Q9UNY5 417 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 HEATR5AQ86XA9 2040 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 ADGRG4Q8IZF6 3080 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 CRYBG3Q68DQ2 2970 aa11.31□□□□□ -0.6
SMARCE1-218ENST00000582955 INTS1Q8N201 2190 aaKnown RBP11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 A0A1W2PNR3 127 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 CDHR4A6H8M9 788 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 CFAP73A6NFT4 308 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 ETV2O00321 342 aaPredicted RBP11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 ADAM11O75078 769 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 TNFSF13O75888 250 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 AQP8O94778 261 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 PGM3O95394 542 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 CRHP06850 196 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 THBS1P07996 1170 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 ARAFP10398 606 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 PRF1P14222 555 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 UQCRBP14927 111 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 IGFBP2P18065 325 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 DLX5P56178 289 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 MTPNP58546 118 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 CDK6Q00534 326 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 MAPRE2Q15555 327 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 MMEL1Q495T6 779 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 RUNDC3AQ59EK9 446 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 PRAMEF8Q5VWM4 474 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 PRAMEF7Q5VXH5 474 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 VWA1Q6PCB0 445 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 GRINAQ7Z429 371 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 DMRTC2Q8IXT2 367 aaPredicted RBP11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 ZNF440Q8IYI8 595 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 C10orf82Q8WW14 230 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 REXO5Q96IC2 774 aaKnown RBP11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 OR5B2Q96R09 309 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 CGREF1Q99674 301 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 TRIM8Q9BZR9 551 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 PIGMQ9H3S5 423 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 ARMC7Q9H6L4 198 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 CTPS2Q9NRF8 586 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 FOXD3Q9UJU5 478 aaPredicted RBP11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 CLEC4AQ9UMR7 237 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 IFT52Q9Y366 437 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 SPIN1Q9Y657 262 aaPredicted RBP11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 GMEB1Q9Y692 573 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 MED12LQ86YW9 2145 aa11.3□□□□□ -0.6
SMARCE1-218ENST00000582955 PKDREJQ9NTG1 2253 aa11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 SYT5O00445 386 aa11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 PABPC4LP0CB38 370 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms