RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 TESQ9UGI8 421 aaKnown RBP8.65□□□□□ -1.02
RFFL-210ENST00000582308 RIMS3Q9UJD0 308 aa8.65□□□□□ -1.02
RFFL-210ENST00000582308 ACAD8Q9UKU7 415 aa8.65□□□□□ -1.02
RFFL-210ENST00000582308 VDAC3Q9Y277 283 aa8.65□□□□□ -1.02
RFFL-210ENST00000582308 RRP15Q9Y3B9 282 aaKnown RBP8.65□□□□□ -1.02
RFFL-210ENST00000582308 MRPS18CQ9Y3D5 142 aaKnown RBP8.65□□□□□ -1.02
RFFL-210ENST00000582308 A0A087WZY1 265 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 TRAPPC13A5PLN9 417 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 FAM166BA8MTA8 275 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 SHISA8B8ZZ34 492 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 ETV2O00321 342 aaPredicted RBP8.64□□□□□ -1.03
RFFL-210ENST00000582308 WISP2O76076 250 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 RASAL1O95294 804 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 CELA3AP09093 270 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 UQCRBP14927 111 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 PRKCAP17252 672 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 ITGA2P17301 1181 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 HOXB6P17509 224 aaKnown RBP8.64□□□□□ -1.03
RFFL-210ENST00000582308 HK1P19367 917 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 TCEA1P23193 301 aaKnown RBP8.64□□□□□ -1.03
RFFL-210ENST00000582308 GDF1P27539 372 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 SRD5A2P31213 254 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 SLC1A3P43003 542 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 MAGEA5P43359 124 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 ZNF41P51814 821 aaPredicted RBP8.64□□□□□ -1.03
RFFL-210ENST00000582308 CDH12P55289 794 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 DLX5P56178 289 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 B3GALT5-AS1P59052 145 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 TAS2R41P59536 307 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 COPZ1P61923 177 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 GANABQ14697 944 aaKnown RBP8.64□□□□□ -1.03
RFFL-210ENST00000582308 TOMM20Q15388 145 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 SLC25A53Q5H9E4 307 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 COLEC12Q5KU26 742 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 RPUSD3Q6P087 351 aaKnown RBP8.64□□□□□ -1.03
RFFL-210ENST00000582308 ZFP1Q6P2D0 407 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 ZNF613Q6PF04 617 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 PLEKHM3Q6ZWE6 761 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 GDF7Q7Z4P5 450 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 ZNF605Q86T29 641 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 YRDCQ86U90 279 aaKnown RBP8.64□□□□□ -1.03
RFFL-210ENST00000582308 SLC22A16Q86VW1 577 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 C10orf67Q8IYJ2 551 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 FAM98AQ8NCA5 519 aaKnown RBP8.64□□□□□ -1.03
RFFL-210ENST00000582308 PIK3C3Q8NEB9 887 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 FAM83FQ8NEG4 500 aaPredicted RBP8.64□□□□□ -1.03
RFFL-210ENST00000582308 OR5M1Q8NGP8 315 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 ZNF563Q8TA94 476 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 POC1BQ8TC44 478 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 ST8SIA1Q92185 356 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 DHRS1Q96LJ7 313 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 PRRC1Q96M27 445 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 PIP5K1AQ99755 562 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 OR2B2Q9GZK3 357 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 ZDHHC11Q9H8X9 412 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 NMNAT1Q9HAN9 279 aaPredicted RBP8.64□□□□□ -1.03
RFFL-210ENST00000582308 MAN2C1Q9NTJ4 1040 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 VNN3Q9NY84 501 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 DKKL1Q9UK85 242 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 PRDM4Q9UKN5 801 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 FAM32AQ9Y421 112 aaKnown RBP8.64□□□□□ -1.03
RFFL-210ENST00000582308 COL6A6A6NMZ7 2263 aa8.64□□□□□ -1.03
RFFL-210ENST00000582308 SHANK1Q9Y566 2161 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 A0A0B4J2E0 115 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 A0A1B0GX12 115 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 C7orf72A4D263 438 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 FAM47E-STBD1D6RA91 191 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 HNRNPRO43390 633 aaKnown RBP8.63□□□□□ -1.03
RFFL-210ENST00000582308 EFNA2O43921 213 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 TRAPPC6AO75865 159 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 OR5F1O95221 314 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 HPNP05981 417 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 SFTPCP11686 197 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 IL11P20809 199 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 TACR3P29371 465 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 MERTKQ12866 999 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 FOXF1Q12946 379 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 FOXD4Q12950 439 aaPredicted RBP8.63□□□□□ -1.03
RFFL-210ENST00000582308 SLC10A1Q14973 349 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 GLYR1Q49A26 553 aaPredicted RBP8.63□□□□□ -1.03
RFFL-210ENST00000582308 WIPI1Q5MNZ9 446 aaPredicted RBP8.63□□□□□ -1.03
RFFL-210ENST00000582308 OR2T5Q6IEZ7 315 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 AAGABQ6PD74 315 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 ULK3Q6PHR2 472 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 LINC00114Q6XXX2 140 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 WDR88Q6ZMY6 472 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 GRINAQ7Z429 371 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 AMIGO2Q86SJ2 522 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 ATG4DQ86TL0 474 aaPredicted RBP8.63□□□□□ -1.03
RFFL-210ENST00000582308 CYP4Z1Q86W10 505 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 ADGRG3Q86Y34 549 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 SIAH3Q8IW03 269 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 OFCC1Q8IZS5 231 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 LILRA2Q8N149 483 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 GTPBP8Q8N3Z3 284 aaPredicted RBP8.63□□□□□ -1.03
RFFL-210ENST00000582308 FAM109AQ8N4B1 249 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 TEX19Q8NA77 164 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 OR2T29Q8NH02 315 aa8.63□□□□□ -1.03
RFFL-210ENST00000582308 DNAJA4Q8WW22 397 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms