RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 FRYQ5TBA9 3013 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 SPTBP11277 2137 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 IGLV3-12A0A075B6K2 115 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 CENPVL1A0A0U1RR11 272 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 A0A1B0GWA3 101 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 HTR3EA5X5Y0 456 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 VGLL3A8MV65 326 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 STMND1H3BQB6 276 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 KPNA4O00629 521 aaPredicted RBP8.53□□□□□ -1.04
SS18-220ENST00000582092 MAN1A2O60476 641 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 WBP4O75554 376 aaKnown RBP8.53□□□□□ -1.04
SS18-220ENST00000582092 ZFAND5O76080 213 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 IGHEP01854 428 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 MT-ND2P03891 347 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 IGKV3-11P04433 115 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 HIST1H2ABP04908 130 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 CDK1P06493 297 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 PNMTP11086 282 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 ITIH1P19827 911 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 NOS3P29474 1203 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 ATP6V1E1P36543 226 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 ADH7P40394 386 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 OMPP47874 163 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 TMED10P49755 219 aaKnown RBP8.53□□□□□ -1.04
SS18-220ENST00000582092 NUDT6P53370 316 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 PNLIPRP2P54317 469 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 TMBIM6P55061 237 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 CXADRP78310 365 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 SLC35A2P78381 396 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 TLE3Q04726 772 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 EMX1Q04741 257 aaPredicted RBP8.53□□□□□ -1.04
SS18-220ENST00000582092 ST3GAL4Q11206 333 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 OCLNQ16625 522 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 SMN1Q16637 294 aaKnown RBP8.53□□□□□ -1.04
SS18-220ENST00000582092 KLHL26Q53HC5 615 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 CLEC12AQ5QGZ9 265 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 FOXB2Q5VYV0 432 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 C12orf73Q69YU5 71 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 PAPD4Q6PIY7 484 aaKnown RBP8.53□□□□□ -1.04
SS18-220ENST00000582092 LANCL3Q6ZV70 420 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 COX15Q7KZN9 410 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 HIST3H2AQ7L7L0 130 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 PRR22Q8IZ63 422 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 NLGN4XQ8N0W4 816 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 IQCF1Q8N6M8 205 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 LSMEM1Q8N8F7 131 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 ZNF321PQ8N8H1 164 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 GATSQ8NAP1 163 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 C17orf47Q8NEP4 570 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 OR2T33Q8NG76 320 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 OR4C3Q8NH37 302 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 FANK1Q8TC84 345 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 GGHQ92820 318 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 HIST1H2ACQ93077 130 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 ADIPOR1Q96A54 375 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 TMCO6Q96DC7 493 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 BPIFA2Q96DR5 249 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 OMA1Q96E52 524 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 UBL7Q96S82 380 aaPredicted RBP8.53□□□□□ -1.04
SS18-220ENST00000582092 CCNL2Q96S94 520 aaPredicted RBP8.53□□□□□ -1.04
SS18-220ENST00000582092 DDA1Q9BW61 102 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 IFT27Q9BW83 186 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 RSPO3Q9BXY4 272 aaPredicted RBP8.53□□□□□ -1.04
SS18-220ENST00000582092 POLDIP3Q9BY77 421 aaKnown RBP8.53□□□□□ -1.04
SS18-220ENST00000582092 EGLN3Q9H6Z9 239 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 SLC25A19Q9HC21 320 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 HHATLQ9HCP6 504 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 APMAPQ9HDC9 416 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 AMBNQ9NP70 447 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 SIDT1Q9NXL6 827 aaKnown RBP8.53□□□□□ -1.04
SS18-220ENST00000582092 PTTG2Q9NZH5 202 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 BAIAP2Q9UQB8 552 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 ERGIC3Q9Y282 383 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 CHST2Q9Y4C5 530 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 CDH10Q9Y6N8 788 aa8.53□□□□□ -1.04
SS18-220ENST00000582092 A0A0B4J2E0 115 aa8.52□□□□□ -1.05
SS18-220ENST00000582092 IGHV3-20A0A0C4DH32 117 aa8.52□□□□□ -1.05
SS18-220ENST00000582092 TRBV11-1A0A0K0K1C0 115 aa8.52□□□□□ -1.05
SS18-220ENST00000582092 A0A1B0GX12 115 aa8.52□□□□□ -1.05
SS18-220ENST00000582092 CDC14CA4D256 554 aa8.52□□□□□ -1.05
SS18-220ENST00000582092 SAGE2PA6NJ88 616 aa8.52□□□□□ -1.05
SS18-220ENST00000582092 RIIAD1A6NNX1 92 aa8.52□□□□□ -1.05
SS18-220ENST00000582092 B4E171 279 aa8.52□□□□□ -1.05
SS18-220ENST00000582092 NPIPB9F8W1W9 429 aa8.52□□□□□ -1.05
SS18-220ENST00000582092 GNB5O14775 395 aa8.52□□□□□ -1.05
SS18-220ENST00000582092 TO15178 435 aa8.52□□□□□ -1.05
SS18-220ENST00000582092 HCRTR2O43614 444 aa8.52□□□□□ -1.05
SS18-220ENST00000582092 PIP5K1CO60331 668 aa8.52□□□□□ -1.05
SS18-220ENST00000582092 EIF4E2O60573 245 aaKnown RBP8.52□□□□□ -1.05
SS18-220ENST00000582092 ENTPD6O75354 484 aa8.52□□□□□ -1.05
SS18-220ENST00000582092 SLC25A12O75746 678 aa8.52□□□□□ -1.05
SS18-220ENST00000582092 TIAF1O95411 115 aa8.52□□□□□ -1.05
SS18-220ENST00000582092 ONECUT2O95948 504 aa8.52□□□□□ -1.05
SS18-220ENST00000582092 IFNGP01579 166 aa8.52□□□□□ -1.05
SS18-220ENST00000582092 CLPSP04118 112 aa8.52□□□□□ -1.05
SS18-220ENST00000582092 IGFBP1P08833 259 aaPredicted RBP8.52□□□□□ -1.05
SS18-220ENST00000582092 STSP08842 583 aa8.52□□□□□ -1.05
SS18-220ENST00000582092 GP1BBP13224 206 aa8.52□□□□□ -1.05
SS18-220ENST00000582092 MYL12AP19105 171 aa8.52□□□□□ -1.05
SS18-220ENST00000582092 PGCP20142 388 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms