RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 CACNA1CQ13936 2221 aa11.33□□□□□ -0.59
SNORD55-201ENST00000581525 NKX2-6A6NCS4 301 aa11.33□□□□□ -0.6
SNORD55-201ENST00000581525 TMEM247A6NEH6 219 aa11.33□□□□□ -0.6
SNORD55-201ENST00000581525 SLC22A20A6NK97 555 aa11.33□□□□□ -0.6
SNORD55-201ENST00000581525 BBIP1A8MTZ0 92 aa11.33□□□□□ -0.6
SNORD55-201ENST00000581525 ANGPT2O15123 496 aa11.33□□□□□ -0.6
SNORD55-201ENST00000581525 GMFGO60234 142 aa11.33□□□□□ -0.6
SNORD55-201ENST00000581525 CGAP01215 116 aa11.33□□□□□ -0.6
SNORD55-201ENST00000581525 TMIGD3P0DMS9 266 aaPredicted RBP11.33□□□□□ -0.6
SNORD55-201ENST00000581525 IL7RP16871 459 aa11.33□□□□□ -0.6
SNORD55-201ENST00000581525 TCEA1P23193 301 aaKnown RBP11.33□□□□□ -0.6
SNORD55-201ENST00000581525 ME2P23368 584 aa11.33□□□□□ -0.6
SNORD55-201ENST00000581525 KIR2DL2P43627 348 aaPredicted RBP11.33□□□□□ -0.6
SNORD55-201ENST00000581525 CLK1P49759 484 aaKnown RBP11.33□□□□□ -0.6
SNORD55-201ENST00000581525 RNF144AP50876 292 aaPredicted RBP11.33□□□□□ -0.6
SNORD55-201ENST00000581525 EPS8Q12929 822 aa11.33□□□□□ -0.6
SNORD55-201ENST00000581525 FOXF2Q12947 444 aa11.33□□□□□ -0.6
SNORD55-201ENST00000581525 SELENBP1Q13228 472 aa11.33□□□□□ -0.6
SNORD55-201ENST00000581525 LIN52Q52LA3 116 aa11.33□□□□□ -0.6
SNORD55-201ENST00000581525 PDSS1Q5T2R2 415 aa11.33□□□□□ -0.6
SNORD55-201ENST00000581525 MRPL2Q5T653 305 aaKnown RBP11.33□□□□□ -0.6
SNORD55-201ENST00000581525 REEP3Q6NUK4 255 aa11.33□□□□□ -0.6
SNORD55-201ENST00000581525 PLEKHM3Q6ZWE6 761 aa11.33□□□□□ -0.6
SNORD55-201ENST00000581525 ADGRG3Q86Y34 549 aa11.33□□□□□ -0.6
SNORD55-201ENST00000581525 PTOV1Q86YD1 416 aa11.33□□□□□ -0.6
SNORD55-201ENST00000581525 ZNF295-AS1Q8N0V1 137 aa11.33□□□□□ -0.6
SNORD55-201ENST00000581525 OR10D3Q8NH80 312 aa11.33□□□□□ -0.6
SNORD55-201ENST00000581525 OR2V1Q8NHB1 315 aa11.33□□□□□ -0.6
SNORD55-201ENST00000581525 OSTF1Q92882 214 aa11.33□□□□□ -0.6
SNORD55-201ENST00000581525 MAL2Q969L2 176 aa11.33□□□□□ -0.6
SNORD55-201ENST00000581525 ZNF845Q96IR2 970 aaPredicted RBP11.33□□□□□ -0.6
SNORD55-201ENST00000581525 PINK1Q9BXM7 581 aa11.33□□□□□ -0.6
SNORD55-201ENST00000581525 PIGMQ9H3S5 423 aa11.33□□□□□ -0.6
SNORD55-201ENST00000581525 COQ10BQ9H8M1 238 aa11.33□□□□□ -0.6
SNORD55-201ENST00000581525 ZNF232Q9UNY5 417 aa11.33□□□□□ -0.6
SNORD55-201ENST00000581525 APCP25054 2843 aa11.33□□□□□ -0.6
SNORD55-201ENST00000581525 DOCK7Q96N67 2140 aa11.33□□□□□ -0.6
SNORD55-201ENST00000581525 HCFC1P51610 2035 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 A0A1W2PNV4 684 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 GJE1A6NN92 205 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 A8MXE2 369 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 FXYD1O00168 92 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 EIF1AYO14602 144 aaKnown RBP11.32□□□□□ -0.6
SNORD55-201ENST00000581525 GCM2O75603 506 aaPredicted RBP11.32□□□□□ -0.6
SNORD55-201ENST00000581525 NUDT14O95848 222 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 PABPC4LP0CB38 370 aaKnown RBP11.32□□□□□ -0.6
SNORD55-201ENST00000581525 SHC1P29353 583 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 PEX19P40855 299 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 SLC1A3P43003 542 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 HTR3AP46098 478 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 ASCL1P50553 236 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 PCBP3P57721 371 aaKnown RBP11.32□□□□□ -0.6
SNORD55-201ENST00000581525 CARD18P57730 90 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 RAC3P60763 192 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 CDK6Q00534 326 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 LARS2Q15031 903 aaKnown RBP11.32□□□□□ -0.6
SNORD55-201ENST00000581525 PON3Q15166 354 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 MAPRE2Q15555 327 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 TRMT5Q32P41 509 aaKnown RBP11.32□□□□□ -0.6
SNORD55-201ENST00000581525 GCNT6Q5T4J0 391 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 NANOGP8Q6NSW7 305 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 DHRS4L2Q6PKH6 230 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 PLXDC2Q6UX71 529 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 ZNF836Q6ZNA1 936 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 CHMP1BQ7LBR1 199 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 GRINAQ7Z429 371 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 DHDDSQ86SQ9 333 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 VRK2Q86Y07 508 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 UBQLNLQ8IYU4 475 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 CLIP4Q8N3C7 705 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 FNDC9Q8TBE3 224 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 SLC25A43Q8WUT9 341 aaPredicted RBP11.32□□□□□ -0.6
SNORD55-201ENST00000581525 STARD4Q96DR4 205 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 C14orf79Q96F83 325 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 MYLK2Q9H1R3 596 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 NANOGQ9H9S0 305 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 SLC24A3Q9HC58 644 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 GP6Q9HCN6 339 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 GLRX2Q9NS18 164 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 FAM53CQ9NYF3 392 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 ZNF443Q9Y2A4 671 aaPredicted RBP11.32□□□□□ -0.6
SNORD55-201ENST00000581525 TACC2O95359 2948 aa11.32□□□□□ -0.6
SNORD55-201ENST00000581525 CFAP73A6NFT4 308 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 FAM90A27PA6NNH2 459 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 TNFSF11O14788 317 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 MSTNO14793 375 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 SEC14L5O43304 696 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 ZNF208O43345 1280 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 CXCL13O43927 109 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 SNX3O60493 162 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 CCDC22O60826 627 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 SS18L1O75177 396 aaPredicted RBP11.31□□□□□ -0.6
SNORD55-201ENST00000581525 AQP8O94778 261 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 CD8BP10966 210 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 FCGR2AP12318 317 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 DRD4P21917 467 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 BMP5P22003 454 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 PRKAR1BP31321 381 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 LSP1P33241 339 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 CYLC2Q14093 348 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms