RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 NKX6-1P78426 367 aaPredicted RBP18.96■□□□□ 0.63
CSNK1D-215ENST00000580784 FUT5Q11128 374 aa18.96■□□□□ 0.63
CSNK1D-215ENST00000580784 ACKR1Q16570 336 aa18.96■□□□□ 0.63
CSNK1D-215ENST00000580784 EIF3MQ7L2H7 374 aaKnown RBP18.96■□□□□ 0.63
CSNK1D-215ENST00000580784 HMGN2P46Q86SG4 172 aa18.96■□□□□ 0.63
CSNK1D-215ENST00000580784 KRTAP1-3Q8IUG1 177 aa18.96■□□□□ 0.63
CSNK1D-215ENST00000580784 SLC35A5Q9BS91 424 aa18.96■□□□□ 0.63
CSNK1D-215ENST00000580784 SAP130Q9H0E3 1048 aa18.96■□□□□ 0.63
CSNK1D-215ENST00000580784 FANCFQ9NPI8 374 aa18.96■□□□□ 0.63
CSNK1D-215ENST00000580784 AIG1Q9NVV5 245 aa18.96■□□□□ 0.63
CSNK1D-215ENST00000580784 KLHL13Q9P2N7 655 aa18.96■□□□□ 0.63
CSNK1D-215ENST00000580784 MARCOQ9UEW3 520 aaPredicted RBP18.96■□□□□ 0.63
CSNK1D-215ENST00000580784 BTNL2Q9UIR0 455 aa18.96■□□□□ 0.63
CSNK1D-215ENST00000580784 WDR45Q9Y484 360 aa18.96■□□□□ 0.63
CSNK1D-215ENST00000580784 PRAMEF27A3QJZ7 478 aa18.95■□□□□ 0.62
CSNK1D-215ENST00000580784 KIAA0513O60268 411 aa18.95■□□□□ 0.62
CSNK1D-215ENST00000580784 BCAS1O75363 584 aaPredicted RBP18.95■□□□□ 0.62
CSNK1D-215ENST00000580784 GUSBP08236 651 aa18.95■□□□□ 0.62
CSNK1D-215ENST00000580784 KITP10721 976 aa18.95■□□□□ 0.62
CSNK1D-215ENST00000580784 EPHA3P29320 983 aa18.95■□□□□ 0.62
CSNK1D-215ENST00000580784 PGM1P36871 562 aa18.95■□□□□ 0.62
CSNK1D-215ENST00000580784 RAC3P60763 192 aa18.95■□□□□ 0.62
CSNK1D-215ENST00000580784 AP1ARQ63HQ0 302 aa18.95■□□□□ 0.62
CSNK1D-215ENST00000580784 SPATA19Q7Z5L4 167 aa18.95■□□□□ 0.62
CSNK1D-215ENST00000580784 ST8SIA1Q92185 356 aa18.95■□□□□ 0.62
CSNK1D-215ENST00000580784 CCDC115Q96NT0 180 aa18.95■□□□□ 0.62
CSNK1D-215ENST00000580784 INPP5KQ9BT40 448 aa18.95■□□□□ 0.62
CSNK1D-215ENST00000580784 ACTR6Q9GZN1 396 aa18.95■□□□□ 0.62
CSNK1D-215ENST00000580784 GSX1Q9H4S2 264 aaPredicted RBP18.95■□□□□ 0.62
CSNK1D-215ENST00000580784 POLE3Q9NRF9 147 aa18.95■□□□□ 0.62
CSNK1D-215ENST00000580784 THAP1Q9NVV9 213 aa18.95■□□□□ 0.62
CSNK1D-215ENST00000580784 GPR52Q9Y2T5 361 aa18.95■□□□□ 0.62
CSNK1D-215ENST00000580784 GPR45Q9Y5Y3 372 aa18.95■□□□□ 0.62
CSNK1D-215ENST00000580784 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.94■□□□□ 0.62
CSNK1D-215ENST00000580784 HDAC3O15379 428 aa18.94■□□□□ 0.62
CSNK1D-215ENST00000580784 SNNO75324 88 aaPredicted RBP18.94■□□□□ 0.62
CSNK1D-215ENST00000580784 H6PDO95479 791 aa18.94■□□□□ 0.62
CSNK1D-215ENST00000580784 YES1P07947 543 aa18.94■□□□□ 0.62
CSNK1D-215ENST00000580784 FOSL1P15407 271 aa18.94■□□□□ 0.62
CSNK1D-215ENST00000580784 PSMB1P20618 241 aaKnown RBP18.94■□□□□ 0.62
CSNK1D-215ENST00000580784 KHKP50053 298 aa18.94■□□□□ 0.62
CSNK1D-215ENST00000580784 MERTKQ12866 999 aa18.94■□□□□ 0.62
CSNK1D-215ENST00000580784 GPAT3Q53EU6 434 aa18.94■□□□□ 0.62
CSNK1D-215ENST00000580784 BEX5Q5H9J7 111 aa18.94■□□□□ 0.62
CSNK1D-215ENST00000580784 TFAP2EQ6VUC0 442 aa18.94■□□□□ 0.62
CSNK1D-215ENST00000580784 FRRS1Q6ZNA5 592 aa18.94■□□□□ 0.62
CSNK1D-215ENST00000580784 RNF130Q86XS8 419 aa18.94■□□□□ 0.62
CSNK1D-215ENST00000580784 WFDC8Q8IUA0 241 aa18.94■□□□□ 0.62
CSNK1D-215ENST00000580784 PIGTQ969N2 578 aa18.94■□□□□ 0.62
CSNK1D-215ENST00000580784 OR5B2Q96R09 309 aa18.94■□□□□ 0.62
CSNK1D-215ENST00000580784 GP6Q9HCN6 339 aa18.94■□□□□ 0.62
CSNK1D-215ENST00000580784 ING1Q9UK53 422 aaPredicted RBP18.94■□□□□ 0.62
CSNK1D-215ENST00000580784 CCDC154A6NI56 674 aa18.93■□□□□ 0.62
CSNK1D-215ENST00000580784 HMGN4O00479 90 aa18.93■□□□□ 0.62
CSNK1D-215ENST00000580784 GCM2O75603 506 aaPredicted RBP18.93■□□□□ 0.62
CSNK1D-215ENST00000580784 PGCP20142 388 aa18.93■□□□□ 0.62
CSNK1D-215ENST00000580784 FPR1P21462 350 aa18.93■□□□□ 0.62
CSNK1D-215ENST00000580784 CDKN2CP42773 168 aa18.93■□□□□ 0.62
CSNK1D-215ENST00000580784 CHRNEQ04844 493 aa18.93■□□□□ 0.62
CSNK1D-215ENST00000580784 TSC22D1Q15714 1073 aa18.93■□□□□ 0.62
CSNK1D-215ENST00000580784 C3orf33Q6P1S2 294 aa18.93■□□□□ 0.62
CSNK1D-215ENST00000580784 PLEKHM3Q6ZWE6 761 aa18.93■□□□□ 0.62
CSNK1D-215ENST00000580784 GABRG1Q8N1C3 465 aa18.93■□□□□ 0.62
CSNK1D-215ENST00000580784 ZNF619Q8N2I2 560 aa18.93■□□□□ 0.62
CSNK1D-215ENST00000580784 SLC43A2Q8N370 569 aa18.93■□□□□ 0.62
CSNK1D-215ENST00000580784 FAM71CQ8NEG0 241 aa18.93■□□□□ 0.62
CSNK1D-215ENST00000580784 TMEM234Q8WY98 164 aa18.93■□□□□ 0.62
CSNK1D-215ENST00000580784 ARL8AQ96BM9 186 aa18.93■□□□□ 0.62
CSNK1D-215ENST00000580784 OR52E6Q96RD3 313 aa18.93■□□□□ 0.62
CSNK1D-215ENST00000580784 PANX1Q96RD7 426 aa18.93■□□□□ 0.62
CSNK1D-215ENST00000580784 ACER3Q9NUN7 267 aa18.93■□□□□ 0.62
CSNK1D-215ENST00000580784 SLC35A3Q9Y2D2 325 aa18.93■□□□□ 0.62
CSNK1D-215ENST00000580784 CLDN24A6NM45 220 aa18.92■□□□□ 0.62
CSNK1D-215ENST00000580784 TRPC5OSA6NMA1 111 aa18.92■□□□□ 0.62
CSNK1D-215ENST00000580784 SMAD9O15198 467 aaKnown RBP18.92■□□□□ 0.62
CSNK1D-215ENST00000580784 SMPD2O60906 423 aa18.92■□□□□ 0.62
CSNK1D-215ENST00000580784 PLAUP00749 431 aa18.92■□□□□ 0.62
CSNK1D-215ENST00000580784 GSNP06396 782 aa18.92■□□□□ 0.62
CSNK1D-215ENST00000580784 PGRP06401 933 aa18.92■□□□□ 0.62
CSNK1D-215ENST00000580784 RYKP34925 604 aa18.92■□□□□ 0.62
CSNK1D-215ENST00000580784 MAGOHP61326 146 aaKnown RBP18.92■□□□□ 0.62
CSNK1D-215ENST00000580784 KCNJ10P78508 379 aa18.92■□□□□ 0.62
CSNK1D-215ENST00000580784 SHEQ5VZ18 495 aa18.92■□□□□ 0.62
CSNK1D-215ENST00000580784 ALKBH2Q6NS38 261 aa18.92■□□□□ 0.62
CSNK1D-215ENST00000580784 ZNF621Q6ZSS3 439 aa18.92■□□□□ 0.62
CSNK1D-215ENST00000580784 ANKFN1Q8N957 763 aa18.92■□□□□ 0.62
CSNK1D-215ENST00000580784 OIT3Q8WWZ8 545 aa18.92■□□□□ 0.62
CSNK1D-215ENST00000580784 S100PBPQ96BU1 408 aa18.92■□□□□ 0.62
CSNK1D-215ENST00000580784 ZNF775Q96BV0 537 aaPredicted RBP18.92■□□□□ 0.62
CSNK1D-215ENST00000580784 CCL19Q99731 98 aa18.92■□□□□ 0.62
CSNK1D-215ENST00000580784 PIP5K1AQ99755 562 aa18.92■□□□□ 0.62
CSNK1D-215ENST00000580784 PSD2Q9BQI7 771 aa18.92■□□□□ 0.62
CSNK1D-215ENST00000580784 OR10A4Q9H209 315 aa18.92■□□□□ 0.62
CSNK1D-215ENST00000580784 SERINC1Q9NRX5 453 aa18.92■□□□□ 0.62
CSNK1D-215ENST00000580784 ZNF814B7Z6K7 855 aa18.91■□□□□ 0.62
CSNK1D-215ENST00000580784 DIO1P49895 249 aa18.91■□□□□ 0.62
CSNK1D-215ENST00000580784 SLC18A1P54219 525 aa18.91■□□□□ 0.62
CSNK1D-215ENST00000580784 PLAURQ03405 335 aa18.91■□□□□ 0.62
CSNK1D-215ENST00000580784 RASGEF1BQ0VAM2 473 aa18.91■□□□□ 0.62
CSNK1D-215ENST00000580784 SYPL1Q16563 259 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms