RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 SAP130Q9H0E3 1048 aa10.28□□□□□ -0.76
SSH2-208ENST00000579040 C12orf49Q9H741 205 aa10.28□□□□□ -0.76
SSH2-208ENST00000579040 SERINC1Q9NRX5 453 aa10.28□□□□□ -0.76
SSH2-208ENST00000579040 KLHL9Q9P2J3 617 aa10.28□□□□□ -0.76
SSH2-208ENST00000579040 BTNL2Q9UIR0 455 aa10.28□□□□□ -0.76
SSH2-208ENST00000579040 KCNE5Q9UJ90 142 aa10.28□□□□□ -0.76
SSH2-208ENST00000579040 MKLN1Q9UL63 735 aa10.28□□□□□ -0.76
SSH2-208ENST00000579040 SLC35A3Q9Y2D2 325 aa10.28□□□□□ -0.76
SSH2-208ENST00000579040 WDR45Q9Y484 360 aa10.28□□□□□ -0.76
SSH2-208ENST00000579040 USF3Q68DE3 2245 aa10.27□□□□□ -0.76
SSH2-208ENST00000579040 DIAPH2O60879 1101 aa10.27□□□□□ -0.77
SSH2-208ENST00000579040 GCM2O75603 506 aaPredicted RBP10.27□□□□□ -0.77
SSH2-208ENST00000579040 CPSF4O95639 269 aaKnown RBP10.27□□□□□ -0.77
SSH2-208ENST00000579040 YES1P07947 543 aa10.27□□□□□ -0.77
SSH2-208ENST00000579040 UBTFL6P0CB48 400 aaPredicted RBP10.27□□□□□ -0.77
SSH2-208ENST00000579040 OR12D1P0DN82 309 aa10.27□□□□□ -0.77
SSH2-208ENST00000579040 CHI3L1P36222 383 aaPredicted RBP10.27□□□□□ -0.77
SSH2-208ENST00000579040 ANXA11P50995 505 aaKnown RBP10.27□□□□□ -0.77
SSH2-208ENST00000579040 SESN3P58005 492 aa10.27□□□□□ -0.77
SSH2-208ENST00000579040 HPCAP84074 193 aa10.27□□□□□ -0.77
SSH2-208ENST00000579040 LRRC74AQ0VAA2 488 aa10.27□□□□□ -0.77
SSH2-208ENST00000579040 P2RY6Q15077 328 aa10.27□□□□□ -0.77
SSH2-208ENST00000579040 FAM174BQ3ZCQ3 159 aa10.27□□□□□ -0.77
SSH2-208ENST00000579040 TIGD2Q4W5G0 525 aa10.27□□□□□ -0.77
SSH2-208ENST00000579040 Q5PR19 223 aa10.27□□□□□ -0.77
SSH2-208ENST00000579040 HHATQ5VTY9 493 aa10.27□□□□□ -0.77
SSH2-208ENST00000579040 TNFAIP8L2Q6P589 184 aaPredicted RBP10.27□□□□□ -0.77
SSH2-208ENST00000579040 SPATA19Q7Z5L4 167 aa10.27□□□□□ -0.77
SSH2-208ENST00000579040 TUSC5Q8IXB3 177 aa10.27□□□□□ -0.77
SSH2-208ENST00000579040 GABRG1Q8N1C3 465 aa10.27□□□□□ -0.77
SSH2-208ENST00000579040 CLEC4FQ8N1N0 589 aa10.27□□□□□ -0.77
SSH2-208ENST00000579040 ZNF619Q8N2I2 560 aa10.27□□□□□ -0.77
SSH2-208ENST00000579040 TRIML2Q8N7C3 387 aa10.27□□□□□ -0.77
SSH2-208ENST00000579040 ATP6V1C2Q8NEY4 427 aa10.27□□□□□ -0.77
SSH2-208ENST00000579040 XAGE5Q8WWM1 108 aa10.27□□□□□ -0.77
SSH2-208ENST00000579040 ZNF524Q96C55 264 aa10.27□□□□□ -0.77
SSH2-208ENST00000579040 ROPN1LQ96C74 230 aa10.27□□□□□ -0.77
SSH2-208ENST00000579040 POM121Q96HA1 1249 aa10.27□□□□□ -0.77
SSH2-208ENST00000579040 SLC35A5Q9BS91 424 aa10.27□□□□□ -0.77
SSH2-208ENST00000579040 THUMPD3Q9BV44 507 aaKnown RBP10.27□□□□□ -0.77
SSH2-208ENST00000579040 BCO1Q9HAY6 547 aa10.27□□□□□ -0.77
SSH2-208ENST00000579040 ACER3Q9NUN7 267 aa10.27□□□□□ -0.77
SSH2-208ENST00000579040 AIG1Q9NVV5 245 aa10.27□□□□□ -0.77
SSH2-208ENST00000579040 MARCOQ9UEW3 520 aaPredicted RBP10.27□□□□□ -0.77
SSH2-208ENST00000579040 NSD1Q96L73 2696 aaPredicted RBP10.27□□□□□ -0.77
SSH2-208ENST00000579040 CENPVL1A0A0U1RR11 272 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 A0A1W2PNR3 127 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 TRPC5OSA6NMA1 111 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 SDHDO14521 159 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 HDAC3O15379 428 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 CYTIPO60759 359 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 CYP7B1O75881 506 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 ENPP1P22413 925 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 IL32P24001 234 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 FKBP2P26885 142 aaKnown RBP10.26□□□□□ -0.77
SSH2-208ENST00000579040 PGM1P36871 562 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 APOBEC1P41238 236 aaKnown RBP10.26□□□□□ -0.77
SSH2-208ENST00000579040 CSNK2A1P68400 391 aaPredicted RBP10.26□□□□□ -0.77
SSH2-208ENST00000579040 FUT5Q11128 374 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 MERTKQ12866 999 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 SYT14P1Q58G82 188 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 SFRP5Q5T4F7 317 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 TYW3Q6IPR3 259 aaKnown RBP10.26□□□□□ -0.77
SSH2-208ENST00000579040 FRRS1Q6ZNA5 592 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 ZNF704Q6ZNC4 412 aaPredicted RBP10.26□□□□□ -0.77
SSH2-208ENST00000579040 PLEKHM3Q6ZWE6 761 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 NUFIP2Q7Z417 695 aaKnown RBP10.26□□□□□ -0.77
SSH2-208ENST00000579040 WFDC8Q8IUA0 241 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 CMIPQ8IY22 773 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 RAB3IL1Q8TBN0 382 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 IGFBPL1Q8WX77 278 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 RAB8BQ92930 207 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 PLPPR2Q96GM1 343 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 OR5B2Q96R09 309 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 PAIP2Q9BPZ3 127 aaKnown RBP10.26□□□□□ -0.77
SSH2-208ENST00000579040 PSD2Q9BQI7 771 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 TMEM204Q9BSN7 226 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 GSX2Q9BZM3 304 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 NGBQ9NPG2 151 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 EXOSC3Q9NQT5 275 aaKnown RBP10.26□□□□□ -0.77
SSH2-208ENST00000579040 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.26□□□□□ -0.77
SSH2-208ENST00000579040 PNPOQ9NVS9 261 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 THAP1Q9NVV9 213 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 LIPT1Q9Y234 373 aa10.26□□□□□ -0.77
SSH2-208ENST00000579040 SPIN1Q9Y657 262 aaPredicted RBP10.26□□□□□ -0.77
SSH2-208ENST00000579040 TMEM120BA0PK00 339 aa10.25□□□□□ -0.77
SSH2-208ENST00000579040 ZNF724A8MTY0 619 aa10.25□□□□□ -0.77
SSH2-208ENST00000579040 FAM171A2A8MVW0 826 aa10.25□□□□□ -0.77
SSH2-208ENST00000579040 SLCO1B7G3V0H7 640 aa10.25□□□□□ -0.77
SSH2-208ENST00000579040 HS3ST1O14792 307 aa10.25□□□□□ -0.77
SSH2-208ENST00000579040 SMAD9O15198 467 aaKnown RBP10.25□□□□□ -0.77
SSH2-208ENST00000579040 SNNO75324 88 aaPredicted RBP10.25□□□□□ -0.77
SSH2-208ENST00000579040 H6PDO95479 791 aa10.25□□□□□ -0.77
SSH2-208ENST00000579040 CNOT4O95628 575 aaKnown RBP10.25□□□□□ -0.77
SSH2-208ENST00000579040 PGRP06401 933 aa10.25□□□□□ -0.77
SSH2-208ENST00000579040 INHBBP09529 407 aa10.25□□□□□ -0.77
SSH2-208ENST00000579040 ALDOCP09972 364 aaKnown RBP10.25□□□□□ -0.77
SSH2-208ENST00000579040 PAX1P15863 534 aa10.25□□□□□ -0.77
SSH2-208ENST00000579040 ADSLP30566 484 aaPredicted RBP10.25□□□□□ -0.77
SSH2-208ENST00000579040 MAGEA8P43361 318 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms