RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 SEC24CP53992 1094 aa9.47□□□□□ -0.89
GGA3-206ENST00000578773 RAG2P55895 527 aa9.47□□□□□ -0.89
GGA3-206ENST00000578773 PHEXP78562 749 aa9.47□□□□□ -0.89
GGA3-206ENST00000578773 MAD2L1BPQ15013 274 aaPredicted RBP9.47□□□□□ -0.89
GGA3-206ENST00000578773 TAF9Q16594 264 aa9.47□□□□□ -0.89
GGA3-206ENST00000578773 SGO1Q5FBB7 561 aa9.47□□□□□ -0.89
GGA3-206ENST00000578773 TCHHL1Q5QJ38 904 aaPredicted RBP9.47□□□□□ -0.89
GGA3-206ENST00000578773 LIPJQ5W064 366 aa9.47□□□□□ -0.89
GGA3-206ENST00000578773 OR7E24Q6IFN5 339 aa9.47□□□□□ -0.89
GGA3-206ENST00000578773 GALNT18Q6P9A2 607 aa9.47□□□□□ -0.89
GGA3-206ENST00000578773 FBXO30Q8TB52 745 aa9.47□□□□□ -0.89
GGA3-206ENST00000578773 ACTRT2Q8TDY3 377 aa9.47□□□□□ -0.89
GGA3-206ENST00000578773 OTUB1Q96FW1 271 aaPredicted RBP9.47□□□□□ -0.89
GGA3-206ENST00000578773 OR5B2Q96R09 309 aa9.47□□□□□ -0.89
GGA3-206ENST00000578773 ATOH8Q96SQ7 321 aa9.47□□□□□ -0.89
GGA3-206ENST00000578773 QRSL1Q9H0R6 528 aaKnown RBP9.47□□□□□ -0.89
GGA3-206ENST00000578773 TAS2R9Q9NYW1 312 aa9.47□□□□□ -0.89
GGA3-206ENST00000578773 NUDT4Q9NZJ9 180 aa9.47□□□□□ -0.89
GGA3-206ENST00000578773 ADAM29Q9UKF5 820 aa9.47□□□□□ -0.89
GGA3-206ENST00000578773 DOCK11Q5JSL3 2073 aa9.47□□□□□ -0.89
GGA3-206ENST00000578773 IGKV3D-15A0A087WSY6 115 aa9.46□□□□□ -0.9
GGA3-206ENST00000578773 J3QLI3 93 aa9.46□□□□□ -0.9
GGA3-206ENST00000578773 UPK1AO00322 258 aa9.46□□□□□ -0.9
GGA3-206ENST00000578773 TPM3P06753 285 aa9.46□□□□□ -0.9
GGA3-206ENST00000578773 ERCC1P07992 297 aaPredicted RBP9.46□□□□□ -0.9
GGA3-206ENST00000578773 ACHEP22303 614 aa9.46□□□□□ -0.9
GGA3-206ENST00000578773 GABRA3P34903 492 aa9.46□□□□□ -0.9
GGA3-206ENST00000578773 ALDH3B1P43353 468 aa9.46□□□□□ -0.9
GGA3-206ENST00000578773 PRPS1P60891 318 aa9.46□□□□□ -0.9
GGA3-206ENST00000578773 LCN2P80188 198 aa9.46□□□□□ -0.9
GGA3-206ENST00000578773 GLE1Q53GS7 698 aaKnown RBP9.46□□□□□ -0.9
GGA3-206ENST00000578773 RNASEH2BQ5TBB1 312 aaKnown RBP9.46□□□□□ -0.9
GGA3-206ENST00000578773 TSPO2Q5TGU0 170 aa9.46□□□□□ -0.9
GGA3-206ENST00000578773 GOLGA7Q7Z5G4 137 aa9.46□□□□□ -0.9
GGA3-206ENST00000578773 CCDC103Q8IW40 242 aa9.46□□□□□ -0.9
GGA3-206ENST00000578773 TEX29Q8N6K0 151 aa9.46□□□□□ -0.9
GGA3-206ENST00000578773 B4GALNT2Q8NHY0 566 aa9.46□□□□□ -0.9
GGA3-206ENST00000578773 KTI12Q96EK9 354 aaPredicted RBP9.46□□□□□ -0.9
GGA3-206ENST00000578773 DESI2Q9BSY9 194 aa9.46□□□□□ -0.9
GGA3-206ENST00000578773 KATNB1Q9BVA0 655 aa9.46□□□□□ -0.9
GGA3-206ENST00000578773 RSPO3Q9BXY4 272 aaPredicted RBP9.46□□□□□ -0.9
GGA3-206ENST00000578773 MRPL37Q9BZE1 423 aaKnown RBP9.46□□□□□ -0.9
GGA3-206ENST00000578773 Q9N2J8 555 aa9.46□□□□□ -0.9
GGA3-206ENST00000578773 C1RLQ9NZP8 487 aa9.46□□□□□ -0.9
GGA3-206ENST00000578773 MYEF2Q9P2K5 600 aaKnown RBP9.46□□□□□ -0.9
GGA3-206ENST00000578773 CLDN34H7C241 214 aa9.45□□□□□ -0.9
GGA3-206ENST00000578773 OR7A17O14581 309 aa9.45□□□□□ -0.9
GGA3-206ENST00000578773 SKAP2O75563 359 aaPredicted RBP9.45□□□□□ -0.9
GGA3-206ENST00000578773 IGHV2-5P01817 119 aa9.45□□□□□ -0.9
GGA3-206ENST00000578773 JUNP05412 331 aaKnown RBP9.45□□□□□ -0.9
GGA3-206ENST00000578773 PRKCAP17252 672 aa9.45□□□□□ -0.9
GGA3-206ENST00000578773 SLC7A1P30825 629 aa9.45□□□□□ -0.9
GGA3-206ENST00000578773 GP5P40197 560 aa9.45□□□□□ -0.9
GGA3-206ENST00000578773 ELK3P41970 407 aa9.45□□□□□ -0.9
GGA3-206ENST00000578773 PSPHP78330 225 aa9.45□□□□□ -0.9
GGA3-206ENST00000578773 ATP6AP1LQ52LC2 224 aa9.45□□□□□ -0.9
GGA3-206ENST00000578773 RUSC1-AS1Q66K80 236 aa9.45□□□□□ -0.9
GGA3-206ENST00000578773 ANKRD16Q6P6B7 361 aa9.45□□□□□ -0.9
GGA3-206ENST00000578773 C16orf87Q6PH81 154 aa9.45□□□□□ -0.9
GGA3-206ENST00000578773 CASP12Q6UXS9 341 aa9.45□□□□□ -0.9
GGA3-206ENST00000578773 ISCA2Q86U28 154 aa9.45□□□□□ -0.9
GGA3-206ENST00000578773 LRP11Q86VZ4 500 aa9.45□□□□□ -0.9
GGA3-206ENST00000578773 WDFY1Q8IWB7 410 aa9.45□□□□□ -0.9
GGA3-206ENST00000578773 FAM9CQ8IZT9 166 aa9.45□□□□□ -0.9
GGA3-206ENST00000578773 C17orf78Q8N4C9 275 aa9.45□□□□□ -0.9
GGA3-206ENST00000578773 C1orf52Q8N6N3 182 aaKnown RBP9.45□□□□□ -0.9
GGA3-206ENST00000578773 L3MBTL4Q8NA19 623 aa9.45□□□□□ -0.9
GGA3-206ENST00000578773 DEFB108BQ8NET1 73 aa9.45□□□□□ -0.9
GGA3-206ENST00000578773 RDH5Q92781 318 aa9.45□□□□□ -0.9
GGA3-206ENST00000578773 ERP27Q96DN0 273 aa9.45□□□□□ -0.9
GGA3-206ENST00000578773 LMF2Q9BU23 707 aaKnown RBP9.45□□□□□ -0.9
GGA3-206ENST00000578773 BEX1Q9HBH7 125 aa9.45□□□□□ -0.9
GGA3-206ENST00000578773 POPDC3Q9HBV1 291 aa9.45□□□□□ -0.9
GGA3-206ENST00000578773 EQTNQ9NQ60 294 aa9.45□□□□□ -0.9
GGA3-206ENST00000578773 MMP26Q9NRE1 261 aa9.45□□□□□ -0.9
GGA3-206ENST00000578773 SENP1Q9P0U3 644 aa9.45□□□□□ -0.9
GGA3-206ENST00000578773 NUP50Q9UKX7 468 aa9.45□□□□□ -0.9
GGA3-206ENST00000578773 SLC12A4Q9UP95 1085 aa9.45□□□□□ -0.9
GGA3-206ENST00000578773 CCDC151A5D8V7 595 aa9.44□□□□□ -0.9
GGA3-206ENST00000578773 HOXA3O43365 443 aaPredicted RBP9.44□□□□□ -0.9
GGA3-206ENST00000578773 CBFA2T2O43439 604 aa9.44□□□□□ -0.9
GGA3-206ENST00000578773 CDC14BO60729 498 aa9.44□□□□□ -0.9
GGA3-206ENST00000578773 ESRRBO95718 433 aa9.44□□□□□ -0.9
GGA3-206ENST00000578773 CRYAAP02489 173 aa9.44□□□□□ -0.9
GGA3-206ENST00000578773 ASMTP46597 345 aa9.44□□□□□ -0.9
GGA3-206ENST00000578773 DIO1P49895 249 aa9.44□□□□□ -0.9
GGA3-206ENST00000578773 RAE1P78406 368 aaKnown RBP9.44□□□□□ -0.9
GGA3-206ENST00000578773 GTF2H2Q13888 395 aa9.44□□□□□ -0.9
GGA3-206ENST00000578773 SLC29A2Q14542 456 aa9.44□□□□□ -0.9
GGA3-206ENST00000578773 ARMCX4Q5H9R4 360 aa9.44□□□□□ -0.9
GGA3-206ENST00000578773 CCNJQ5T5M9 372 aa9.44□□□□□ -0.9
GGA3-206ENST00000578773 STEAP4Q687X5 459 aa9.44□□□□□ -0.9
GGA3-206ENST00000578773 GTF2H2CQ6P1K8 395 aa9.44□□□□□ -0.9
GGA3-206ENST00000578773 IKBIPQ70UQ0 350 aa9.44□□□□□ -0.9
GGA3-206ENST00000578773 PAGE2Q7Z2X7 111 aa9.44□□□□□ -0.9
GGA3-206ENST00000578773 C1orf162Q8NEQ5 155 aaPredicted RBP9.44□□□□□ -0.9
GGA3-206ENST00000578773 NUP37Q8NFH4 326 aa9.44□□□□□ -0.9
GGA3-206ENST00000578773 TRPC4APQ8TEL6 797 aa9.44□□□□□ -0.9
GGA3-206ENST00000578773 UBXN10Q96LJ8 280 aa9.44□□□□□ -0.9
GGA3-206ENST00000578773 WWC2-AS2Q96NR7 200 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms