RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 GON7Q9BXV9 100 aa1.36□□□□□ -2.19
TOP2A-202ENST00000577541 COMMD4Q9H0A8 199 aa1.36□□□□□ -2.19
TOP2A-202ENST00000577541 NXF3Q9H4D5 531 aaKnown RBP1.36□□□□□ -2.19
TOP2A-202ENST00000577541 PTGES2Q9H7Z7 377 aa1.36□□□□□ -2.19
TOP2A-202ENST00000577541 ZDHHC11Q9H8X9 412 aa1.36□□□□□ -2.19
TOP2A-202ENST00000577541 WDR76Q9H967 626 aa1.36□□□□□ -2.19
TOP2A-202ENST00000577541 ELOVL3Q9HB03 270 aa1.36□□□□□ -2.19
TOP2A-202ENST00000577541 LPAR2Q9HBW0 351 aa1.36□□□□□ -2.19
TOP2A-202ENST00000577541 OR1A1Q9P1Q5 309 aa1.36□□□□□ -2.19
TOP2A-202ENST00000577541 TBK1Q9UHD2 729 aa1.36□□□□□ -2.19
TOP2A-202ENST00000577541 DCDC2Q9UHG0 476 aa1.36□□□□□ -2.19
TOP2A-202ENST00000577541 ZNF490Q9ULM2 529 aaPredicted RBP1.36□□□□□ -2.19
TOP2A-202ENST00000577541 GSTK1Q9Y2Q3 226 aa1.36□□□□□ -2.19
TOP2A-202ENST00000577541 MEMO1Q9Y316 297 aa1.36□□□□□ -2.19
TOP2A-202ENST00000577541 AP4B1Q9Y6B7 739 aa1.36□□□□□ -2.19
TOP2A-202ENST00000577541 DYNC1LI1Q9Y6G9 523 aaKnown RBP1.36□□□□□ -2.19
TOP2A-202ENST00000577541 WSB1Q9Y6I7 421 aa1.36□□□□□ -2.19
TOP2A-202ENST00000577541 AP1M2Q9Y6Q5 423 aa1.36□□□□□ -2.19
TOP2A-202ENST00000577541 U3KQV3 271 aa1.36□□□□□ -2.19
TOP2A-202ENST00000577541 SF3B1O75533 1304 aaKnown RBP eCLIP1.36□□□□□ -2.19
TOP2A-202ENST00000577541 IGKV2-28A0A075B6P5 120 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 IGKV2D-24A0A075B6R9 120 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 USP27XA6NNY8 438 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 ZNF705EA8MWA4 302 aaPredicted RBP1.35□□□□□ -2.19
TOP2A-202ENST00000577541 ERVV-1B6SEH8 477 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 H3BMQ9 156 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 ABCD4O14678 606 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 JAK2O60674 1132 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 SUPT7LO94864 414 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 IGKV2D-28P01615 120 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 CALCBP10092 127 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 BCKDHAP12694 445 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 ZNF44P15621 663 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 NCK1P16333 377 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 ARF4P18085 180 aaPredicted RBP1.35□□□□□ -2.19
TOP2A-202ENST00000577541 ATP6V1C1P21283 382 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 AXLP30530 894 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 KIF5BP33176 963 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 HSPA2P54652 639 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 RPS8P62241 208 aaKnown RBP1.35□□□□□ -2.19
TOP2A-202ENST00000577541 SELPLGQ14242 412 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 SLC5A12Q1EHB4 618 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 ZNF630Q2M218 657 aaPredicted RBP1.35□□□□□ -2.19
TOP2A-202ENST00000577541 MAJINQ3KP22 176 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 ANKDD1AQ495B1 522 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 CFAP221Q4G0U5 840 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 TEX44Q53QW1 395 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 TMEM41BQ5BJD5 291 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 ZNF311Q5JNZ3 666 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 RIPPLY2Q5TAB7 128 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 AFTPHQ6ULP2 937 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 ZNF589Q86UQ0 364 aaPredicted RBP1.35□□□□□ -2.19
TOP2A-202ENST00000577541 IFNEQ86WN2 208 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 ZNF786Q8N393 782 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 ALLCQ8N6M5 410 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 C20orf203Q8NBC4 194 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 DENND6BQ8NEG7 585 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 OR5AU1Q8NGC0 362 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 OR2AP1Q8NGE2 309 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 NEIL3Q8TAT5 605 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 CCDC110Q8TBZ0 833 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 PAQR8Q8TEZ7 354 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 GIPC3Q8TF64 312 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 ANKRD49Q8WVL7 239 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 SYAP1Q96A49 352 aaPredicted RBP1.35□□□□□ -2.19
TOP2A-202ENST00000577541 PELI1Q96FA3 418 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 CELF6Q96J87 481 aaKnown RBP1.35□□□□□ -2.19
TOP2A-202ENST00000577541 TTC25Q96NG3 672 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 AMDHD1Q96NU7 426 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 VPS35Q96QK1 796 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 CYP2S1Q96SQ9 504 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 SECISBP2Q96T21 854 aaKnown RBP1.35□□□□□ -2.19
TOP2A-202ENST00000577541 FICDQ9BVA6 458 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 MAGT1Q9H0U3 335 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 GORASP2Q9H8Y8 452 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 NECAP2Q9NVZ3 263 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 RIMS3Q9UJD0 308 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 EIF3LQ9Y262 564 aaKnown RBP1.35□□□□□ -2.19
TOP2A-202ENST00000577541 GAKO14976 1311 aa1.35□□□□□ -2.19
TOP2A-202ENST00000577541 ZNFX1Q9P2E3 1918 aaKnown RBP1.34□□□□□ -2.19
TOP2A-202ENST00000577541 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.34□□□□□ -2.19
TOP2A-202ENST00000577541 IGKV1D-8A0A087WSZ0 117 aa1.34□□□□□ -2.19
TOP2A-202ENST00000577541 A0A0G2JLM5 398 aa1.34□□□□□ -2.19
TOP2A-202ENST00000577541 LOC100131303A0A0U1RQF7 123 aa1.34□□□□□ -2.19
TOP2A-202ENST00000577541 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.34□□□□□ -2.19
TOP2A-202ENST00000577541 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.34□□□□□ -2.19
TOP2A-202ENST00000577541 GSAPA4D1B5 854 aa1.34□□□□□ -2.19
TOP2A-202ENST00000577541 VSTM2BA6NLU5 285 aa1.34□□□□□ -2.19
TOP2A-202ENST00000577541 FOXE1O00358 373 aaPredicted RBP1.34□□□□□ -2.19
TOP2A-202ENST00000577541 DLGAP1O14490 977 aa1.34□□□□□ -2.19
TOP2A-202ENST00000577541 CLDN3O15551 220 aa1.34□□□□□ -2.19
TOP2A-202ENST00000577541 NPIPB7O75200 414 aa1.34□□□□□ -2.19
TOP2A-202ENST00000577541 STX11O75558 287 aa1.34□□□□□ -2.19
TOP2A-202ENST00000577541 SPAG6O75602 509 aa1.34□□□□□ -2.19
TOP2A-202ENST00000577541 IGHV4-34P06331 123 aa1.34□□□□□ -2.19
TOP2A-202ENST00000577541 THRBP10828 461 aa1.34□□□□□ -2.19
TOP2A-202ENST00000577541 UQCRBP14927 111 aa1.34□□□□□ -2.19
TOP2A-202ENST00000577541 MMP11P24347 488 aa1.34□□□□□ -2.19
TOP2A-202ENST00000577541 HTR1EP28566 365 aa1.34□□□□□ -2.19
TOP2A-202ENST00000577541 CD1BP29016 333 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms