RNA–Protein interactions for RNA: ENST00000577524.5

ARHGAP28-208, Transcript of Rho GTPase activating protein 28, human

TSL 5

Gene ARHGAP28, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP28-208	ENST00000577524	PRKCA	P17252	672 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	CCNA2	P20248	432 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	UGT2B10	P36537	528 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	APOBEC1	P41238	236 aa	Known RBP	4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	CRAT	P43155	626 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	MAGEA8	P43361	318 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	HTR3A	P46098	478 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	PCYT1A	P49585	367 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	POLR2J	P52435	117 aa	Known RBP	4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	CRISP3	P54108	245 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	NR1H2	P55055	460 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	RAC3	P60763	192 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	KCNJ10	P78508	379 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	RASGEF1B	Q0VAM2	473 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	MPP2	Q14168	576 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	CAPRIN1	Q14444	709 aa	Known RBP	4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	CASP8	Q14790	479 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	ZNF141	Q15928	474 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	ZNF239	Q16600	458 aa	Known RBP	4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	TMEM44	Q2T9K0	475 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	NDUFAF6	Q330K2	333 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	TIGD2	Q4W5G0	525 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	PDCD4	Q53EL6	469 aa	Known RBP	4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	TNFAIP8L3	Q5GJ75	292 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	BEX5	Q5H9J7	111 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	EXOSC6	Q5RKV6	272 aa	Known RBP	4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	BEND6	Q5SZJ8	279 aa	Predicted RBP	4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	SAXO2	Q658L1	398 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	ANKRD34A	Q69YU3	496 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	ZNF474	Q6S9Z5	364 aa	Predicted RBP	4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	CBLN3	Q6UW01	205 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	PAMR1	Q6UXH9	720 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	SPNS3	Q6ZMD2	512 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	HDX	Q7Z353	690 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	ZNF550	Q7Z398	422 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	GGN	Q86UU5	652 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	RNF130	Q86XS8	419 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	WFDC8	Q8IUA0	241 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	P3H2	Q8IVL5	708 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	CMIP	Q8IY22	773 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	ZNF440	Q8IYI8	595 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	ZNF100	Q8IYN0	542 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	MIER2	Q8N344	545 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	STEAP2	Q8NFT2	490 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	POC1B	Q8TC44	478 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	MIPOL1	Q8TD10	442 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	WDR60	Q8WVS4	1066 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	ROBO4	Q8WZ75	1007 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	ZNF75CP	Q92670	426 aa	Predicted RBP	4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	NRGN	Q92686	78 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	PMM1	Q92871	262 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	PIGT	Q969N2	578 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	DDIT4L	Q96D03	193 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	ARSG	Q96EG1	525 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	CCDC115	Q96NT0	180 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	WFIKKN1	Q96NZ8	548 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	TRNT1	Q96Q11	434 aa	Known RBP	4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	FOXC2	Q99958	501 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	NAA11	Q9BSU3	229 aa	Predicted RBP	4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	HDHD5	Q9BXW7	423 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	C20orf27	Q9GZN8	174 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	ZNF350	Q9GZX5	532 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	WDR55	Q9H6Y2	383 aa	Predicted RBP	4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	MTHFD2L	Q9H903	347 aa	Predicted RBP	4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	UBTD1	Q9HAC8	227 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	GP6	Q9HCN6	339 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	PLSCR4	Q9NRQ2	329 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	ACER3	Q9NUN7	267 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	ZIM2	Q9NZV7	527 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	EMC3	Q9P0I2	261 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	P2RX2	Q9UBL9	471 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	ICAM5	Q9UMF0	924 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	GPR52	Q9Y2T5	361 aa		4.85	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	PHF3	Q92576	2039 aa	Known RBP	4.84	□□□□□ -1.63
ARHGAP28-208	ENST00000577524		A0A1W2PNR3	127 aa		4.84	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	CIB4	A0PJX0	185 aa		4.84	□□□□□ -1.63
ARHGAP28-208	ENST00000577524		B4DXG7	233 aa		4.84	□□□□□ -1.63
ARHGAP28-208	ENST00000577524		C9JVG2	144 aa		4.84	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	NPIPB9	F8W1W9	429 aa		4.84	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	GPR171	O14626	319 aa		4.84	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	KLF11	O14901	512 aa		4.84	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	SMPD2	O60906	423 aa		4.84	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	SCN2B	O60939	215 aa		4.84	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	SNN	O75324	88 aa	Predicted RBP	4.84	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	TGDS	O95455	350 aa		4.84	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	H6PD	O95479	791 aa		4.84	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	HRG	P04196	525 aa		4.84	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	GUSB	P08236	651 aa		4.84	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	VIM	P08670	466 aa	Known RBP	4.84	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	ALDOC	P09972	364 aa	Known RBP	4.84	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	NCF2	P19878	526 aa	Predicted RBP	4.84	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	IL11	P20809	199 aa		4.84	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	CRYGS	P22914	178 aa		4.84	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	CXCR1	P25024	350 aa		4.84	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	AGTR1	P30556	359 aa		4.84	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	IDH2	P48735	452 aa	Known RBP	4.84	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	CLK1	P49759	484 aa	Known RBP	4.84	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	POLR2H	P52434	150 aa	Known RBP	4.84	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	SESN3	P58005	492 aa		4.84	□□□□□ -1.63
ARHGAP28-208	ENST00000577524	OR2B6	P58173	313 aa		4.84	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms