RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 TMEM234Q8WY98 164 aa23.65■■□□□ 1.38
PPP4R1-204ENST00000577393 CNOT9Q92600 299 aaKnown RBP23.65■■□□□ 1.38
PPP4R1-204ENST00000577393 SIKE1Q9BRV8 207 aa23.65■■□□□ 1.38
PPP4R1-204ENST00000577393 EXOSC3Q9NQT5 275 aaKnown RBP23.65■■□□□ 1.38
PPP4R1-204ENST00000577393 ACER3Q9NUN7 267 aa23.65■■□□□ 1.38
PPP4R1-204ENST00000577393 GALNT8Q9NY28 637 aa23.65■■□□□ 1.38
PPP4R1-204ENST00000577393 SLC25A37Q9NYZ2 338 aa23.65■■□□□ 1.38
PPP4R1-204ENST00000577393 ANKHD1Q8IWZ3 2542 aaKnown RBP23.64■■□□□ 1.38
PPP4R1-204ENST00000577393 A0A0G2JND7 137 aa23.64■■□□□ 1.37
PPP4R1-204ENST00000577393 MSTNO14793 375 aa23.64■■□□□ 1.37
PPP4R1-204ENST00000577393 BCHEP06276 602 aa23.64■■□□□ 1.37
PPP4R1-204ENST00000577393 WDR60Q8WVS4 1066 aa23.64■■□□□ 1.37
PPP4R1-204ENST00000577393 RABEP2Q9H5N1 569 aa23.64■■□□□ 1.37
PPP4R1-204ENST00000577393 THUMPD1Q9NXG2 353 aaKnown RBP23.64■■□□□ 1.37
PPP4R1-204ENST00000577393 CALML5Q9NZT1 146 aa23.64■■□□□ 1.37
PPP4R1-204ENST00000577393 TRIM33Q9UPN9 1127 aa23.64■■□□□ 1.37
PPP4R1-204ENST00000577393 TACC2O95359 2948 aa23.63■■□□□ 1.37
PPP4R1-204ENST00000577393 CREBBPQ92793 2442 aa23.63■■□□□ 1.37
PPP4R1-204ENST00000577393 ADAM11O75078 769 aa23.63■■□□□ 1.37
PPP4R1-204ENST00000577393 DBIP07108 87 aaKnown RBP23.63■■□□□ 1.37
PPP4R1-204ENST00000577393 IL7RP16871 459 aa23.63■■□□□ 1.37
PPP4R1-204ENST00000577393 CRISP3P54108 245 aa23.63■■□□□ 1.37
PPP4R1-204ENST00000577393 SORDQ00796 357 aa23.63■■□□□ 1.37
PPP4R1-204ENST00000577393 MERTKQ12866 999 aa23.63■■□□□ 1.37
PPP4R1-204ENST00000577393 PLEKHM3Q6ZWE6 761 aa23.63■■□□□ 1.37
PPP4R1-204ENST00000577393 MSRB3Q8IXL7 192 aa23.63■■□□□ 1.37
PPP4R1-204ENST00000577393 PEX5LQ8IYB4 626 aa23.63■■□□□ 1.37
PPP4R1-204ENST00000577393 ZNF563Q8TA94 476 aa23.63■■□□□ 1.37
PPP4R1-204ENST00000577393 ROBO4Q8WZ75 1007 aa23.63■■□□□ 1.37
PPP4R1-204ENST00000577393 SRXN1Q9BYN0 137 aa23.63■■□□□ 1.37
PPP4R1-204ENST00000577393 OPN3Q9H1Y3 402 aaPredicted RBP23.63■■□□□ 1.37
PPP4R1-204ENST00000577393 RAD21L1Q9H4I0 556 aa23.63■■□□□ 1.37
PPP4R1-204ENST00000577393 ZNF385DQ9H6B1 395 aa23.63■■□□□ 1.37
PPP4R1-204ENST00000577393 COQ10BQ9H8M1 238 aa23.63■■□□□ 1.37
PPP4R1-204ENST00000577393 TIGARQ9NQ88 270 aa23.63■■□□□ 1.37
PPP4R1-204ENST00000577393 CLEC4AQ9UMR7 237 aa23.63■■□□□ 1.37
PPP4R1-204ENST00000577393 MPDZO75970 2070 aa23.63■■□□□ 1.37
PPP4R1-204ENST00000577393 DSPPQ9NZW4 1301 aa23.62■■□□□ 1.37
PPP4R1-204ENST00000577393 UQCRHLA0A096LP55 91 aa23.62■■□□□ 1.37
PPP4R1-204ENST00000577393 TUBAL3A6NHL2 446 aa23.62■■□□□ 1.37
PPP4R1-204ENST00000577393 CGAP01215 116 aa23.62■■□□□ 1.37
PPP4R1-204ENST00000577393 NUDT7P0C024 238 aa23.62■■□□□ 1.37
PPP4R1-204ENST00000577393 NID1P14543 1247 aa23.62■■□□□ 1.37
PPP4R1-204ENST00000577393 GNA13Q14344 377 aa23.62■■□□□ 1.37
PPP4R1-204ENST00000577393 HSP90B2PQ58FF3 399 aa23.62■■□□□ 1.37
PPP4R1-204ENST00000577393 RPS26P11Q5JNZ5 115 aaPredicted RBP23.62■■□□□ 1.37
PPP4R1-204ENST00000577393 C3orf33Q6P1S2 294 aa23.62■■□□□ 1.37
PPP4R1-204ENST00000577393 FAM214BQ7L5A3 538 aa23.62■■□□□ 1.37
PPP4R1-204ENST00000577393 LINC01560Q8TB33 94 aa23.62■■□□□ 1.37
PPP4R1-204ENST00000577393 FAM222BQ8WU58 562 aa23.62■■□□□ 1.37
PPP4R1-204ENST00000577393 TMEM19Q96HH6 336 aa23.62■■□□□ 1.37
PPP4R1-204ENST00000577393 GMPPAQ96IJ6 420 aaPredicted RBP23.62■■□□□ 1.37
PPP4R1-204ENST00000577393 DNAJB12Q9NXW2 375 aaKnown RBP23.62■■□□□ 1.37
PPP4R1-204ENST00000577393 VAPAQ9P0L0 249 aa23.62■■□□□ 1.37
PPP4R1-204ENST00000577393 A0A1W2PP18 115 aa23.61■■□□□ 1.37
PPP4R1-204ENST00000577393 TMEM247A6NEH6 219 aa23.61■■□□□ 1.37
PPP4R1-204ENST00000577393 PLGP00747 810 aaPredicted RBP23.61■■□□□ 1.37
PPP4R1-204ENST00000577393 SLC7A1P30825 629 aa23.61■■□□□ 1.37
PPP4R1-204ENST00000577393 CPOXP36551 454 aa23.61■■□□□ 1.37
PPP4R1-204ENST00000577393 FADDQ13158 208 aa23.61■■□□□ 1.37
PPP4R1-204ENST00000577393 ZNF239Q16600 458 aaKnown RBP23.61■■□□□ 1.37
PPP4R1-204ENST00000577393 MRPL2Q5T653 305 aaKnown RBP23.61■■□□□ 1.37
PPP4R1-204ENST00000577393 VRK2Q86Y07 508 aa23.61■■□□□ 1.37
PPP4R1-204ENST00000577393 OR52P1PQ8NH57 321 aa23.61■■□□□ 1.37
PPP4R1-204ENST00000577393 CPNE4Q96A23 557 aaPredicted RBP23.61■■□□□ 1.37
PPP4R1-204ENST00000577393 SERINC1Q9NRX5 453 aa23.61■■□□□ 1.37
PPP4R1-204ENST00000577393 A0A1W2PNR3 127 aa23.6■■□□□ 1.37
PPP4R1-204ENST00000577393 AP3D1O14617 1153 aa23.6■■□□□ 1.37
PPP4R1-204ENST00000577393 SS18L1O75177 396 aaPredicted RBP23.6■■□□□ 1.37
PPP4R1-204ENST00000577393 CD8BP10966 210 aa23.6■■□□□ 1.37
PPP4R1-204ENST00000577393 BMP2P12643 396 aa23.6■■□□□ 1.37
PPP4R1-204ENST00000577393 ZNF474Q6S9Z5 364 aaPredicted RBP23.6■■□□□ 1.37
PPP4R1-204ENST00000577393 MAL2Q969L2 176 aa23.6■■□□□ 1.37
PPP4R1-204ENST00000577393 REXO5Q96IC2 774 aaKnown RBP23.6■■□□□ 1.37
PPP4R1-204ENST00000577393 CCDC106Q9BWC9 280 aa23.6■■□□□ 1.37
PPP4R1-204ENST00000577393 TMEM120AQ9BXJ8 343 aa23.6■■□□□ 1.37
PPP4R1-204ENST00000577393 A4GALTQ9NPC4 353 aa23.6■■□□□ 1.37
PPP4R1-204ENST00000577393 CTPS2Q9NRF8 586 aa23.6■■□□□ 1.37
PPP4R1-204ENST00000577393 GLRX2Q9NS18 164 aa23.6■■□□□ 1.37
PPP4R1-204ENST00000577393 FGFR1OP2Q9NVK5 253 aa23.6■■□□□ 1.37
PPP4R1-204ENST00000577393 PROCRQ9UNN8 238 aa23.6■■□□□ 1.37
PPP4R1-204ENST00000577393 EMC9Q9Y3B6 208 aa23.6■■□□□ 1.37
PPP4R1-204ENST00000577393 PDZD2O15018 2839 aa23.6■■□□□ 1.37
PPP4R1-204ENST00000577393 TRBV5-3A0A0A0MS03 114 aa23.59■■□□□ 1.37
PPP4R1-204ENST00000577393 A0A0G2JPF8 293 aa23.59■■□□□ 1.37
PPP4R1-204ENST00000577393 HNRNPCL2B2RXH8 293 aa23.59■■□□□ 1.37
PPP4R1-204ENST00000577393 HNRNPCL3B7ZW38 293 aa23.59■■□□□ 1.37
PPP4R1-204ENST00000577393 HNRNPCL1O60812 293 aaKnown RBP23.59■■□□□ 1.37
PPP4R1-204ENST00000577393 HNRNPCL4P0DMR1 293 aa23.59■■□□□ 1.37
PPP4R1-204ENST00000577393 APOBEC1P41238 236 aaKnown RBP23.59■■□□□ 1.37
PPP4R1-204ENST00000577393 IDH2P48735 452 aaKnown RBP23.59■■□□□ 1.37
PPP4R1-204ENST00000577393 CTBP2P56545 445 aa23.59■■□□□ 1.37
PPP4R1-204ENST00000577393 FAM27E3Q08E93 113 aa23.59■■□□□ 1.37
PPP4R1-204ENST00000577393 LIN52Q52LA3 116 aa23.59■■□□□ 1.37
PPP4R1-204ENST00000577393 METTL21CQ5VZV1 264 aa23.59■■□□□ 1.37
PPP4R1-204ENST00000577393 GTF2IRD2BQ6EKJ0 949 aa23.59■■□□□ 1.37
PPP4R1-204ENST00000577393 GRINAQ7Z429 371 aa23.59■■□□□ 1.37
PPP4R1-204ENST00000577393 GTF2IRD2Q86UP8 949 aa23.59■■□□□ 1.37
PPP4R1-204ENST00000577393 TMEM200AQ86VY9 491 aa23.59■■□□□ 1.37
PPP4R1-204ENST00000577393 ZNF610Q8N9Z0 462 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms