RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 SERINC1Q9NRX5 453 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 CCL27Q9Y4X3 112 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 PMF1-BGLAPU3KQ54 211 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 SVEP1Q4LDE5 3571 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 ZNF264O43296 627 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 OIP5O43482 229 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 EIF4E2O60573 245 aaKnown RBP10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 UBL4AP11441 157 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 NEFHP12036 1026 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 IGFBP5P24593 272 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 EDNRAP25101 427 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 HPCAL1P37235 193 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 ASMTP46597 345 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 DIO1P49895 249 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 RNF144AP50876 292 aaPredicted RBP10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 ATP12AP54707 1039 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 CSNK2A1P68400 391 aaPredicted RBP10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 SPOCK1Q08629 439 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 MLC1Q15049 377 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 QPRTQ15274 297 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 FAM120AOSQ5T036 256 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 DCST2Q5T1A1 773 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.25□□□□□ -0.772e-6■■□□□ 12.7
CTDNEP1-212ENST00000576613 LIPNQ5VXI9 398 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 OR7E24Q6IFN5 339 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 ZYG11AQ6WRX3 759 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 ARIH2OSQ8N7S6 290 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 CLHC1Q8NHS4 586 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 RFWD2Q8NHY2 731 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 ADAMTS15Q8TE58 950 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 ZNF75CPQ92670 426 aaPredicted RBP10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 APH1AQ96BI3 265 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 ZHX1-C8orf76Q96EF9 292 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 FCRL1Q96LA6 429 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 ACTRT3Q9BYD9 372 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 FKRPQ9H9S5 495 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 ASB6Q9NWX5 421 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 TAS2R16Q9NYV7 291 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 DCDC2Q9UHG0 476 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 FAF1Q9UNN5 650 aaPredicted RBP10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 TMED5Q9Y3A6 229 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 DTNAQ9Y4J8 743 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 SLC25A15Q9Y619 301 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 FKBP7Q9Y680 259 aa10.25□□□□□ -0.77
CTDNEP1-212ENST00000576613 ALPK2Q86TB3 2170 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 IGKV3D-15A0A087WSY6 115 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 NPIPA5A0A0B4J1W7 369 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 LOC100289279A0A1B0GTE1 492 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 NPIPA7E9PJI5 369 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 G3V2L1 256 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 M0R1B8 84 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 SULT2B1O00204 365 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 NDUFS8O00217 210 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 ETV2O00321 342 aaPredicted RBP10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 GLRA3O75311 464 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 H6PDO95479 791 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 CHEK2O96017 543 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 IGHV3-9P01782 118 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 ABHD2P08910 425 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 NPIPA8P0DM63 369 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 GCAP28676 217 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 RPL3P39023 403 aaKnown RBP10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 RPL38P63173 70 aaKnown RBP10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 TP53BP2Q13625 1128 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 GGTLC2Q14390 218 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 SQLEQ14534 574 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 PDK3Q15120 406 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 NDUFAF6Q330K2 333 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 SPDYE7PQ495Y7 208 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 TIGD2Q4W5G0 525 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 CLEC6AQ6EIG7 209 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 ABLIM2Q6H8Q1 611 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 B3GLCTQ6Y288 498 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 IL17RELQ6ZVW7 336 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 OR56A1Q8NGH5 318 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 SLC25A43Q8WUT9 341 aaPredicted RBP10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 TMEM234Q8WY98 164 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 ST8SIA1Q92185 356 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 ANP32BQ92688 251 aaKnown RBP10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 PIMREGQ9BSJ6 248 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 ANKZF1Q9H8Y5 726 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 SIRT3Q9NTG7 399 aaPredicted RBP10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 BAIAP2L1Q9UHR4 511 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 NOSIPQ9Y314 301 aaKnown RBP10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 ATP23Q9Y6H3 246 aa10.24□□□□□ -0.77
CTDNEP1-212ENST00000576613 TMEM114B3SHH9 223 aa10.23□□□□□ -0.77
CTDNEP1-212ENST00000576613 GPR171O14626 319 aa10.23□□□□□ -0.77
CTDNEP1-212ENST00000576613 APEHP13798 732 aaKnown RBP10.23□□□□□ -0.77
CTDNEP1-212ENST00000576613 EFNA1P20827 205 aaPredicted RBP10.23□□□□□ -0.77
CTDNEP1-212ENST00000576613 APOBEC3AP31941 199 aaPredicted RBP10.23□□□□□ -0.77
CTDNEP1-212ENST00000576613 CCT3P49368 545 aaKnown RBP10.23□□□□□ -0.77
CTDNEP1-212ENST00000576613 PDLIM4P50479 330 aa10.23□□□□□ -0.77
CTDNEP1-212ENST00000576613 DNAJB13P59910 316 aa10.23□□□□□ -0.77
CTDNEP1-212ENST00000576613 SRSF2Q01130 221 aaKnown RBP10.23□□□□□ -0.77
CTDNEP1-212ENST00000576613 RFTN2Q52LD8 501 aaPredicted RBP10.23□□□□□ -0.77
CTDNEP1-212ENST00000576613 SYT14P1Q58G82 188 aa10.23□□□□□ -0.77
CTDNEP1-212ENST00000576613 RNF165Q6ZSG1 346 aa10.23□□□□□ -0.77
CTDNEP1-212ENST00000576613 TMPPEQ6ZT21 453 aa10.23□□□□□ -0.77
CTDNEP1-212ENST00000576613 MTDHQ86UE4 582 aaKnown RBP10.23□□□□□ -0.77
CTDNEP1-212ENST00000576613 HOMEZQ8IX15 550 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms