RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 MEX3BQ6ZN04 569 aaKnown RBP7.76□□□□□ -1.17
SMG6-216ENST00000575176 ESPNLQ6ZVH7 1005 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 PLEKHM3Q6ZWE6 761 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 BTLAQ7Z6A9 289 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 TSPYL5Q86VY4 417 aaPredicted RBP7.76□□□□□ -1.17
SMG6-216ENST00000575176 VRK2Q86Y07 508 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 GRAMD2AQ8IUY3 354 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 TRIML2Q8N7C3 387 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 GOLGA6L1Q8N7Z2 621 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 OR2V1Q8NHB1 315 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 WDR60Q8WVS4 1066 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 ST8SIA1Q92185 356 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 SMPDL3BQ92485 455 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 INTS12Q96CB8 462 aaKnown RBP7.76□□□□□ -1.17
SMG6-216ENST00000575176 KLHL15Q96M94 604 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 TM9SF2Q99805 663 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 THUMPD3Q9BV44 507 aaKnown RBP7.76□□□□□ -1.17
SMG6-216ENST00000575176 KCNJ16Q9NPI9 418 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 SAR1AQ9NR31 198 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 ACER3Q9NUN7 267 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 RLIMQ9NVW2 624 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 GALNT8Q9NY28 637 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 P2RX2Q9UBL9 471 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 PCDHGB4Q9UN71 923 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 LIPT1Q9Y234 373 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 SLC35A3Q9Y2D2 325 aa7.76□□□□□ -1.17
SMG6-216ENST00000575176 GPC6Q9Y625 555 aaPredicted RBP7.76□□□□□ -1.17
SMG6-216ENST00000575176 A0A0G2JND7 137 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 A8MXE2 369 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 EIF1AYO14602 144 aaKnown RBP7.75□□□□□ -1.17
SMG6-216ENST00000575176 DVL2O14641 736 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 ATP8B1O43520 1251 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 TPST2O60704 377 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 RAMP1O60894 148 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 KRT75O95678 551 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 IL2RAP01589 272 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 CRHP06850 196 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 THBS1P07996 1170 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 LOXP28300 417 aaPredicted RBP7.75□□□□□ -1.17
SMG6-216ENST00000575176 AGTR1P30556 359 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 MDH1P40925 334 aaKnown RBP7.75□□□□□ -1.17
SMG6-216ENST00000575176 EIF1P41567 113 aaKnown RBP7.75□□□□□ -1.17
SMG6-216ENST00000575176 PCYT1AP49585 367 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 ZNF41P51814 821 aaPredicted RBP7.75□□□□□ -1.17
SMG6-216ENST00000575176 STX1BP61266 288 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 SORDQ00796 357 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 CBFBQ13951 182 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 GLIPR1L2Q4G1C9 344 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 GPAT3Q53EU6 434 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 RUNDC3AQ59EK9 446 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 C6orf10Q5SRN2 563 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 ATAD3BQ5T9A4 648 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 PRAMEF8Q5VWM4 474 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 PRAMEF7Q5VXH5 474 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 EIF3MQ7L2H7 374 aaKnown RBP7.75□□□□□ -1.17
SMG6-216ENST00000575176 DHDDSQ86SQ9 333 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 ADGRG3Q86Y34 549 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 CMIPQ8IY22 773 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 LILRA2Q8N149 483 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 CLIP4Q8N3C7 705 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 MEIOBQ8N635 442 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 ZNF614Q8N883 585 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 OR10Q1Q8NGQ4 319 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 ABHD3Q8WU67 409 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 PMM1Q92871 262 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 RNASE6Q93091 150 aaKnown RBP7.75□□□□□ -1.17
SMG6-216ENST00000575176 ARL5BQ96KC2 179 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 ANKRD27Q96NW4 1050 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 SLC39A3Q9BRY0 314 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 TMEM38AQ9H6F2 299 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 RMND5AQ9H871 391 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 HHATLQ9HCP6 504 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 CTPS2Q9NRF8 586 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 CRIM1Q9NZV1 1036 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 PACSIN3Q9UKS6 424 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 ZNF443Q9Y2A4 671 aaPredicted RBP7.75□□□□□ -1.17
SMG6-216ENST00000575176 F8P00451 2351 aa7.75□□□□□ -1.17
SMG6-216ENST00000575176 A0A1W2PNR3 127 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 ZC3H12DA2A288 527 aaKnown RBP7.74□□□□□ -1.17
SMG6-216ENST00000575176 ZNF716A6NP11 495 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 FRS3O43559 492 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 TPST1O60507 370 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 NPIPB7O75200 414 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 PGM3O95394 542 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 DBIP07108 87 aaKnown RBP7.74□□□□□ -1.17
SMG6-216ENST00000575176 PABPC4LP0CB38 370 aaKnown RBP7.74□□□□□ -1.17
SMG6-216ENST00000575176 CD8BP10966 210 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 COX6B1P14854 86 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 HPGDP15428 266 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 HTR2AP28223 471 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 NTF4P34130 210 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 SFTPDP35247 375 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 CRATP43155 626 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 EIF1AXP47813 144 aaKnown RBP7.74□□□□□ -1.17
SMG6-216ENST00000575176 P2RY4P51582 365 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 MTPNP58546 118 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 H3F3AP84243 136 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 KLF10Q13118 480 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 METTL21CQ5VZV1 264 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 C3orf33Q6P1S2 294 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms