RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 TAF4O00268 1085 aa12.92□□□□□ -0.34
VPS33B-208ENST00000574755 PTP4A3O75365 173 aa12.92□□□□□ -0.34
VPS33B-208ENST00000574755 IGHA1P01876 353 aa12.92□□□□□ -0.34
VPS33B-208ENST00000574755 PRR23D2P0DMB1 279 aaPredicted RBP12.92□□□□□ -0.34
VPS33B-208ENST00000574755 FBLP22087 321 aaKnown RBP12.92□□□□□ -0.34
VPS33B-208ENST00000574755 NOS3P29474 1203 aa12.92□□□□□ -0.34
VPS33B-208ENST00000574755 KLHL12Q53G59 568 aa12.92□□□□□ -0.34
VPS33B-208ENST00000574755 TUBA3EQ6PEY2 450 aa12.92□□□□□ -0.34
VPS33B-208ENST00000574755 MEPCEQ7L2J0 689 aaKnown RBP12.92□□□□□ -0.34
VPS33B-208ENST00000574755 KLHL36Q8N4N3 616 aa12.92□□□□□ -0.34
VPS33B-208ENST00000574755 GATSQ8NAP1 163 aa12.92□□□□□ -0.34
VPS33B-208ENST00000574755 C1GALT1C1Q96EU7 318 aa12.92□□□□□ -0.34
VPS33B-208ENST00000574755 SLC41A2Q96JW4 573 aa12.92□□□□□ -0.34
VPS33B-208ENST00000574755 TNFRSF13CQ96RJ3 184 aa12.92□□□□□ -0.34
VPS33B-208ENST00000574755 HCAR1Q9BXC0 346 aa12.92□□□□□ -0.34
VPS33B-208ENST00000574755 ZNF304Q9HCX3 659 aa12.92□□□□□ -0.34
VPS33B-208ENST00000574755 SNTG1Q9NSN8 517 aa12.92□□□□□ -0.34
VPS33B-208ENST00000574755 ERVK13-1Q9NX77 482 aa12.92□□□□□ -0.34
VPS33B-208ENST00000574755 SERTAD3Q9UJW9 196 aa12.92□□□□□ -0.34
VPS33B-208ENST00000574755 SLC35A3Q9Y2D2 325 aa12.92□□□□□ -0.34
VPS33B-208ENST00000574755 YARS2Q9Y2Z4 477 aaKnown RBP12.92□□□□□ -0.34
VPS33B-208ENST00000574755 ARID1BQ8NFD5 2236 aaPredicted RBP12.91□□□□□ -0.34
VPS33B-208ENST00000574755 ZC3H12DA2A288 527 aaKnown RBP12.91□□□□□ -0.34
VPS33B-208ENST00000574755 RIIAD1A6NNX1 92 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 PPP1R3DO95685 299 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 RORAP35398 523 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 GPR143P51810 404 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 SLC16A1P53985 500 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 RPS7P62081 194 aaKnown RBP12.91□□□□□ -0.34
VPS33B-208ENST00000574755 ZNF45Q02386 682 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 MXD1Q05195 221 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 TPBGQ13641 420 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 ZNF791Q3KP31 576 aaPredicted RBP12.91□□□□□ -0.34
VPS33B-208ENST00000574755 PLK5Q496M5 336 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 KLHL26Q53HC5 615 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 VWA2Q5GFL6 755 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 C22orf42Q6IC83 251 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 LINC00114Q6XXX2 140 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 RTL4Q6ZR62 310 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 ZFP41Q8N8Y5 198 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 ZNF527Q8NB42 609 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 ZSCAN1Q8NBB4 408 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 SLC2A12Q8TD20 617 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 SLC46A1Q96NT5 459 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 NXF5Q9H1B4 397 aaKnown RBP12.91□□□□□ -0.34
VPS33B-208ENST00000574755 TPK1Q9H3S4 243 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 MKKSQ9NPJ1 570 aaPredicted RBP12.91□□□□□ -0.34
VPS33B-208ENST00000574755 UBQLN4Q9NRR5 601 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 NUP210LQ5VU65 1888 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 IGKV3D-11A0A0A0MRZ8 115 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 SLC30A4O14863 429 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 PLD2O14939 933 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 LRRTM2O43300 516 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 PPICP45877 212 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 SLC9A3P48764 834 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 RORCP51449 518 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 RPS25P62851 125 aaKnown RBP12.91□□□□□ -0.34
VPS33B-208ENST00000574755 DBPQ10586 325 aaPredicted RBP12.91□□□□□ -0.34
VPS33B-208ENST00000574755 ARHGAP40Q5TG30 622 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 C1orf189Q5VU69 101 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 WDR74Q6RFH5 385 aaPredicted RBP12.91□□□□□ -0.34
VPS33B-208ENST00000574755 PRSS58Q8IYP2 241 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 SLC37A3Q8NCC5 494 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 ZNF485Q8NCK3 441 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 DNAJA4Q8WW22 397 aaPredicted RBP12.91□□□□□ -0.34
VPS33B-208ENST00000574755 GAL3ST4Q96RP7 486 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 TM9SF2Q99805 663 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 DPYSL5Q9BPU6 564 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 NUDT22Q9BRQ3 303 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 MROQ9BYG7 248 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 ENAMQ9NRM1 1142 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 FGF21Q9NSA1 209 aa12.91□□□□□ -0.34
VPS33B-208ENST00000574755 CRNNQ9UBG3 495 aaPredicted RBP12.91□□□□□ -0.34
VPS33B-208ENST00000574755 AKAP8O43823 692 aaKnown RBP12.9□□□□□ -0.34
VPS33B-208ENST00000574755 LALBAP00709 142 aa12.9□□□□□ -0.34
VPS33B-208ENST00000574755 ZNF3P17036 446 aa12.9□□□□□ -0.34
VPS33B-208ENST00000574755 SLC6A6P31641 620 aa12.9□□□□□ -0.34
VPS33B-208ENST00000574755 GABRA5P31644 462 aa12.9□□□□□ -0.34
VPS33B-208ENST00000574755 DHPSP49366 369 aaPredicted RBP12.9□□□□□ -0.34
VPS33B-208ENST00000574755 OXA1LQ15070 435 aa12.9□□□□□ -0.34
VPS33B-208ENST00000574755 SHBQ15464 509 aa12.9□□□□□ -0.34
VPS33B-208ENST00000574755 ELAVL1Q15717 326 aaKnown RBP12.9□□□□□ -0.34
VPS33B-208ENST00000574755 NSDHLQ15738 373 aa12.9□□□□□ -0.34
VPS33B-208ENST00000574755 CRTC2Q53ET0 693 aaPredicted RBP12.9□□□□□ -0.34
VPS33B-208ENST00000574755 SPANXN2Q5MJ10 180 aa12.9□□□□□ -0.34
VPS33B-208ENST00000574755 PRSS42Q7Z5A4 293 aa12.9□□□□□ -0.34
VPS33B-208ENST00000574755 PARP16Q8N5Y8 322 aa12.9□□□□□ -0.34
VPS33B-208ENST00000574755 PHOSPHO1Q8TCT1 267 aa12.9□□□□□ -0.34
VPS33B-208ENST00000574755 SPRYD4Q8WW59 207 aaPredicted RBP12.9□□□□□ -0.34
VPS33B-208ENST00000574755 PTP4A1Q93096 173 aa12.9□□□□□ -0.34
VPS33B-208ENST00000574755 CCDC74AQ96AQ1 378 aa12.9□□□□□ -0.34
VPS33B-208ENST00000574755 CEP19Q96LK0 163 aa12.9□□□□□ -0.34
VPS33B-208ENST00000574755 ZNF649Q9BS31 505 aa12.9□□□□□ -0.34
VPS33B-208ENST00000574755 BARHL1Q9BZE3 327 aa12.9□□□□□ -0.34
VPS33B-208ENST00000574755 HOXD1Q9GZZ0 328 aa12.9□□□□□ -0.34
VPS33B-208ENST00000574755 OR51V1Q9H2C8 321 aa12.9□□□□□ -0.34
VPS33B-208ENST00000574755 MCCC2Q9HCC0 563 aa12.9□□□□□ -0.34
VPS33B-208ENST00000574755 ABCB10Q9NRK6 738 aa12.9□□□□□ -0.34
VPS33B-208ENST00000574755 QPCTLQ9NXS2 382 aa12.9□□□□□ -0.34
VPS33B-208ENST00000574755 SEMA5BQ9P283 1151 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms