RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 ST8SIA1Q92185 356 aa24.87■■□□□ 1.57
SCARF1-207ENST00000573867 OSTF1Q92882 214 aa24.87■■□□□ 1.57
SCARF1-207ENST00000573867 STARD4Q96DR4 205 aa24.87■■□□□ 1.57
SCARF1-207ENST00000573867 SRXN1Q9BYN0 137 aa24.87■■□□□ 1.57
SCARF1-207ENST00000573867 A4GALTQ9NPC4 353 aa24.87■■□□□ 1.57
SCARF1-207ENST00000573867 ACER3Q9NUN7 267 aa24.87■■□□□ 1.57
SCARF1-207ENST00000573867 GMEB1Q9Y692 573 aa24.87■■□□□ 1.57
SCARF1-207ENST00000573867 TACC2O95359 2948 aa24.87■■□□□ 1.57
SCARF1-207ENST00000573867 CSMD1Q96PZ7 3565 aa24.87■■□□□ 1.57
SCARF1-207ENST00000573867 DBIP07108 87 aaKnown RBP24.86■■□□□ 1.57
SCARF1-207ENST00000573867 CRISP3P54108 245 aa24.86■■□□□ 1.57
SCARF1-207ENST00000573867 SIRPAP78324 504 aa24.86■■□□□ 1.57
SCARF1-207ENST00000573867 FADDQ13158 208 aa24.86■■□□□ 1.57
SCARF1-207ENST00000573867 SELENBP1Q13228 472 aa24.86■■□□□ 1.57
SCARF1-207ENST00000573867 TMEM176BQ3YBM2 270 aaPredicted RBP24.86■■□□□ 1.57
SCARF1-207ENST00000573867 PPP4R4Q6NUP7 873 aa24.86■■□□□ 1.57
SCARF1-207ENST00000573867 ZNF836Q6ZNA1 936 aa24.86■■□□□ 1.57
SCARF1-207ENST00000573867 PLEKHM3Q6ZWE6 761 aa24.86■■□□□ 1.57
SCARF1-207ENST00000573867 BTLAQ7Z6A9 289 aa24.86■■□□□ 1.57
SCARF1-207ENST00000573867 CMIPQ8IY22 773 aa24.86■■□□□ 1.57
SCARF1-207ENST00000573867 PMM1Q92871 262 aa24.86■■□□□ 1.57
SCARF1-207ENST00000573867 RLIMQ9NVW2 624 aa24.86■■□□□ 1.57
SCARF1-207ENST00000573867 CHST2Q9Y4C5 530 aa24.86■■□□□ 1.57
SCARF1-207ENST00000573867 CSMD2Q7Z408 3487 aa24.85■■□□□ 1.57
SCARF1-207ENST00000573867 CRHP06850 196 aa24.85■■□□□ 1.57
SCARF1-207ENST00000573867 IL7RP16871 459 aa24.85■■□□□ 1.57
SCARF1-207ENST00000573867 MDH1P40925 334 aaKnown RBP24.85■■□□□ 1.57
SCARF1-207ENST00000573867 CNEP1R1Q8N9A8 125 aa24.85■■□□□ 1.57
SCARF1-207ENST00000573867 OR52P1PQ8NH57 321 aa24.85■■□□□ 1.57
SCARF1-207ENST00000573867 C14orf79Q96F83 325 aa24.85■■□□□ 1.57
SCARF1-207ENST00000573867 CPPED1Q9BRF8 314 aaPredicted RBP24.85■■□□□ 1.57
SCARF1-207ENST00000573867 RSPO3Q9BXY4 272 aaPredicted RBP24.85■■□□□ 1.57
SCARF1-207ENST00000573867 RAD21L1Q9H4I0 556 aa24.85■■□□□ 1.57
SCARF1-207ENST00000573867 THUMPD1Q9NXG2 353 aaKnown RBP24.85■■□□□ 1.57
SCARF1-207ENST00000573867 CALML5Q9NZT1 146 aa24.85■■□□□ 1.57
SCARF1-207ENST00000573867 LEF1Q9UJU2 399 aaPredicted RBP24.85■■□□□ 1.57
SCARF1-207ENST00000573867 PACSIN3Q9UKS6 424 aa24.85■■□□□ 1.57
SCARF1-207ENST00000573867 CLEC4AQ9UMR7 237 aa24.85■■□□□ 1.57
SCARF1-207ENST00000573867 ARFIP2P53365 341 aa24.84■■□□□ 1.57
SCARF1-207ENST00000573867 KRTAP10-9P60411 292 aa24.84■■□□□ 1.57
SCARF1-207ENST00000573867 EEF1A1P68104 462 aaKnown RBP24.84■■□□□ 1.57
SCARF1-207ENST00000573867 MERTKQ12866 999 aa24.84■■□□□ 1.57
SCARF1-207ENST00000573867 PEX5LQ8IYB4 626 aa24.84■■□□□ 1.57
SCARF1-207ENST00000573867 DPP10Q8N608 796 aa24.84■■□□□ 1.57
SCARF1-207ENST00000573867 ZNF317Q96PQ6 595 aaPredicted RBP24.84■■□□□ 1.57
SCARF1-207ENST00000573867 CCDC106Q9BWC9 280 aa24.84■■□□□ 1.57
SCARF1-207ENST00000573867 PIGMQ9H3S5 423 aa24.84■■□□□ 1.57
SCARF1-207ENST00000573867 PAQR5Q9NXK6 330 aaPredicted RBP24.84■■□□□ 1.57
SCARF1-207ENST00000573867 ZNF443Q9Y2A4 671 aaPredicted RBP24.84■■□□□ 1.57
SCARF1-207ENST00000573867 NDUFAF1Q9Y375 327 aa24.84■■□□□ 1.57
SCARF1-207ENST00000573867 A0A1W2PNR3 127 aa24.83■■□□□ 1.57
SCARF1-207ENST00000573867 A8MXE2 369 aa24.83■■□□□ 1.57
SCARF1-207ENST00000573867 CGAP01215 116 aa24.83■■□□□ 1.57
SCARF1-207ENST00000573867 ARAFP10398 606 aa24.83■■□□□ 1.57
SCARF1-207ENST00000573867 CARD18P57730 90 aa24.83■■□□□ 1.57
SCARF1-207ENST00000573867 ZNF239Q16600 458 aaKnown RBP24.83■■□□□ 1.57
SCARF1-207ENST00000573867 CLIP4Q8N3C7 705 aa24.83■■□□□ 1.57
SCARF1-207ENST00000573867 TMEM234Q8WY98 164 aa24.83■■□□□ 1.57
SCARF1-207ENST00000573867 ROBO4Q8WZ75 1007 aa24.83■■□□□ 1.57
SCARF1-207ENST00000573867 RBM24Q9BX46 236 aaKnown RBP24.83■■□□□ 1.57
SCARF1-207ENST00000573867 BCL2L10Q9HD36 194 aa24.83■■□□□ 1.57
SCARF1-207ENST00000573867 CTPS2Q9NRF8 586 aa24.83■■□□□ 1.57
SCARF1-207ENST00000573867 GALNT8Q9NY28 637 aa24.83■■□□□ 1.57
SCARF1-207ENST00000573867 NIPSNAP3AQ9UFN0 247 aaPredicted RBP24.83■■□□□ 1.57
SCARF1-207ENST00000573867 MCTS1Q9ULC4 181 aaKnown RBP24.83■■□□□ 1.57
SCARF1-207ENST00000573867 PDZD2O15018 2839 aa24.82■■□□□ 1.56
SCARF1-207ENST00000573867 A0A0G2JPF8 293 aa24.82■■□□□ 1.56
SCARF1-207ENST00000573867 CDHR4A6H8M9 788 aa24.82■■□□□ 1.56
SCARF1-207ENST00000573867 HNRNPCL2B2RXH8 293 aa24.82■■□□□ 1.56
SCARF1-207ENST00000573867 HNRNPCL3B7ZW38 293 aa24.82■■□□□ 1.56
SCARF1-207ENST00000573867 HNRNPCL1O60812 293 aaKnown RBP24.82■■□□□ 1.56
SCARF1-207ENST00000573867 SYNGR4O95473 234 aa24.82■■□□□ 1.56
SCARF1-207ENST00000573867 HNRNPCL4P0DMR1 293 aa24.82■■□□□ 1.56
SCARF1-207ENST00000573867 FCGR2AP12318 317 aa24.82■■□□□ 1.56
SCARF1-207ENST00000573867 KLK2P20151 261 aa24.82■■□□□ 1.56
SCARF1-207ENST00000573867 SSTR2P30874 369 aa24.82■■□□□ 1.56
SCARF1-207ENST00000573867 IDH2P48735 452 aaKnown RBP24.82■■□□□ 1.56
SCARF1-207ENST00000573867 TLE4Q04727 773 aa24.82■■□□□ 1.56
SCARF1-207ENST00000573867 SELPLGQ14242 412 aa24.82■■□□□ 1.56
SCARF1-207ENST00000573867 LIN52Q52LA3 116 aa24.82■■□□□ 1.56
SCARF1-207ENST00000573867 RUNDC3AQ59EK9 446 aa24.82■■□□□ 1.56
SCARF1-207ENST00000573867 GCNT6Q5T4J0 391 aa24.82■■□□□ 1.56
SCARF1-207ENST00000573867 C3orf33Q6P1S2 294 aa24.82■■□□□ 1.56
SCARF1-207ENST00000573867 DHDDSQ86SQ9 333 aa24.82■■□□□ 1.56
SCARF1-207ENST00000573867 NFKBIDQ8NI38 313 aa24.82■■□□□ 1.56
SCARF1-207ENST00000573867 ZNF563Q8TA94 476 aa24.82■■□□□ 1.56
SCARF1-207ENST00000573867 PRRG4Q9BZD6 226 aa24.82■■□□□ 1.56
SCARF1-207ENST00000573867 OPN3Q9H1Y3 402 aaPredicted RBP24.82■■□□□ 1.56
SCARF1-207ENST00000573867 CRIM1Q9NZV1 1036 aa24.82■■□□□ 1.56
SCARF1-207ENST00000573867 KCNN3Q9UGI6 736 aa24.82■■□□□ 1.56
SCARF1-207ENST00000573867 FBP2O00757 339 aa24.81■■□□□ 1.56
SCARF1-207ENST00000573867 SMNDC1O75940 238 aaKnown RBP eCLIP24.81■■□□□ 1.56
SCARF1-207ENST00000573867 PGM3O95394 542 aa24.81■■□□□ 1.56
SCARF1-207ENST00000573867 GKN3PP0CG01 181 aa24.81■■□□□ 1.56
SCARF1-207ENST00000573867 GPX2P18283 190 aa24.81■■□□□ 1.56
SCARF1-207ENST00000573867 PPIBP23284 216 aaKnown RBP24.81■■□□□ 1.56
SCARF1-207ENST00000573867 EPS8Q12929 822 aa24.81■■□□□ 1.56
SCARF1-207ENST00000573867 GNA13Q14344 377 aa24.81■■□□□ 1.56
SCARF1-207ENST00000573867 ADRM1Q16186 407 aa24.81■■□□□ 1.56
SCARF1-207ENST00000573867 PDSS1Q5T2R2 415 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms