RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 ZCCHC10Q8TBK6 192 aa14.47□□□□□ -0.09
NUP88-207ENST00000573584 ADAMTS14Q8WXS8 1223 aa14.47□□□□□ -0.09
NUP88-207ENST00000573584 TTTY10Q9BZA0 68 aa14.47□□□□□ -0.09
NUP88-207ENST00000573584 BRD7Q9NPI1 651 aa14.47□□□□□ -0.09
NUP88-207ENST00000573584 DNAJB6O75190 326 aa14.47□□□□□ -0.09
NUP88-207ENST00000573584 RAF1P04049 648 aa14.47□□□□□ -0.09
NUP88-207ENST00000573584 TPOP07202 933 aa14.47□□□□□ -0.09
NUP88-207ENST00000573584 ZNF3P17036 446 aa14.47□□□□□ -0.09
NUP88-207ENST00000573584 SGCGQ13326 291 aa14.47□□□□□ -0.09
NUP88-207ENST00000573584 PDGFRLQ15198 375 aa14.47□□□□□ -0.09
NUP88-207ENST00000573584 TCEA2Q15560 299 aa14.47□□□□□ -0.09
NUP88-207ENST00000573584 AMZ1Q400G9 498 aa14.47□□□□□ -0.09
NUP88-207ENST00000573584 ESPNLQ6ZVH7 1005 aa14.47□□□□□ -0.09
NUP88-207ENST00000573584 PAQR7Q86WK9 346 aa14.47□□□□□ -0.09
NUP88-207ENST00000573584 BEST4Q8NFU0 473 aa14.47□□□□□ -0.09
NUP88-207ENST00000573584 LCN9Q8WX39 176 aa14.47□□□□□ -0.09
NUP88-207ENST00000573584 PEX11GQ96HA9 241 aa14.47□□□□□ -0.09
NUP88-207ENST00000573584 MAP6Q96JE9 813 aa14.47□□□□□ -0.09
NUP88-207ENST00000573584 GSDMCQ9BYG8 508 aa14.47□□□□□ -0.09
NUP88-207ENST00000573584 PTTG3PQ9NZH4 202 aa14.47□□□□□ -0.09
NUP88-207ENST00000573584 PPP1R3DO95685 299 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 H2AFB2P0C5Z0 115 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 SDHBP21912 280 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 SLC2A5P22732 501 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 TLX1P31314 330 aaPredicted RBP14.46□□□□□ -0.09
NUP88-207ENST00000573584 SOX9P48436 509 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 SNTB2Q13425 540 aaKnown RBP14.46□□□□□ -0.09
NUP88-207ENST00000573584 GSG1Q2KHT4 349 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 SMUG1Q53HV7 270 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 MTFR2Q6P444 385 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 ZNF687Q8N1G0 1237 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 THAP4Q8WY91 577 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 MS4A3Q96HJ5 214 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 MEPEQ9NQ76 525 aaPredicted RBP14.46□□□□□ -0.09
NUP88-207ENST00000573584 UCKL1Q9NWZ5 548 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 ABRACLQ9P1F3 81 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 USP36Q9P275 1121 aaKnown RBP14.46□□□□□ -0.09
NUP88-207ENST00000573584 SLC17A4Q9Y2C5 497 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 DENND4AQ7Z401 1863 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 LINC00862A6NCI5 91 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 LRRN3E7EW58 273 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 MAGEB4O15481 346 aaPredicted RBP14.46□□□□□ -0.09
NUP88-207ENST00000573584 MT-ND4P03905 459 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 ANKRD34CP0C6C1 535 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 SLC35G6P0C7Q6 338 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 EPXP11678 715 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 CPMP14384 443 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 RPS4Y1P22090 263 aaKnown RBP14.46□□□□□ -0.09
NUP88-207ENST00000573584 HOXD11P31277 338 aaPredicted RBP14.46□□□□□ -0.09
NUP88-207ENST00000573584 AP2S1P53680 142 aaPredicted RBP14.46□□□□□ -0.09
NUP88-207ENST00000573584 HCCSP53701 268 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 RPS15AP62244 130 aaKnown RBP14.46□□□□□ -0.09
NUP88-207ENST00000573584 ACTC1P68032 377 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 ACTA1P68133 377 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 RUNX2Q13950 521 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 TOR2AQ5JU69 321 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 VITQ6UXI7 678 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 COX18Q8N8Q8 333 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 OR6C4Q8NGE1 309 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 GRHL3Q8TE85 626 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 TMEM168Q9H0V1 697 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 LRRN3Q9H3W5 708 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 HEXA-AS1Q9H8Q6 139 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 C19orf53Q9UNZ5 99 aaPredicted RBP14.46□□□□□ -0.09
NUP88-207ENST00000573584 COLEC10Q9Y6Z7 277 aa14.46□□□□□ -0.09
NUP88-207ENST00000573584 TRAV1-2A0A0B4J238 106 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 PRR19A6NJB7 356 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 GPR171O14626 319 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 PTP4A3O75365 173 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 SERPINA3P01011 423 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 ST3GAL2Q16842 350 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 TP53I3Q53FA7 332 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 FIGNL1Q6PIW4 674 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 PRSS45Q7RTY3 260 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 RFLNBQ8N5W9 214 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 HAVCR2Q8TDQ0 301 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 GIMAP1Q8WWP7 306 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 HAO2Q9NYQ3 351 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 GLTPQ9NZD2 209 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 OR6C2Q9NZP2 312 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 ST6GALNAC2Q9UJ37 374 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 TRABD2BA6NFA1 517 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 FLRT2O43155 660 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 SSNA1O43805 119 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 SUZ12Q15022 739 aaKnown RBP14.45□□□□□ -0.1
NUP88-207ENST00000573584 FBXO42Q6P3S6 717 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 USP53Q70EK8 1073 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 RPLP0P6Q8NHW5 317 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 SLC2A12Q8TD20 617 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 ASB16Q96NS5 453 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 TNFRSF13CQ96RJ3 184 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 DHRS9Q9BPW9 319 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 KIR3DX1Q9H7L2 352 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 SHOXO15266 292 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 FMO6PO60774 539 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 CAPZA2P47755 286 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 CAMK2DQ13557 499 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 FGFBP1Q14512 234 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 COL28A1Q2UY09 1125 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 SORCS2Q96PQ0 1159 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms