RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 CD226Q15762 336 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 ZNF124Q15973 351 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 KLHL26Q53HC5 615 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 SPATA19Q7Z5L4 167 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 WDR75Q8IWA0 830 aaKnown RBP6.68□□□□□ -1.34
NUP88-205ENST00000572809 CLEC4FQ8N1N0 589 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 GTPBP8Q8N3Z3 284 aaPredicted RBP6.68□□□□□ -1.34
NUP88-205ENST00000572809 OR4A15Q8NGL6 344 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 LINC01560Q8TB33 94 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 FAM222BQ8WU58 562 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 SMPDL3BQ92485 455 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 ZBTB8AQ96BR9 441 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 TESCQ96BS2 214 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 STARD4Q96DR4 205 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 SH3YL1Q96HL8 342 aaPredicted RBP6.68□□□□□ -1.34
NUP88-205ENST00000572809 ZNF845Q96IR2 970 aaPredicted RBP6.68□□□□□ -1.34
NUP88-205ENST00000572809 RBM24Q9BX46 236 aaKnown RBP6.68□□□□□ -1.34
NUP88-205ENST00000572809 PINK1Q9BXM7 581 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 POLDIP3Q9BY77 421 aaKnown RBP6.68□□□□□ -1.34
NUP88-205ENST00000572809 PRRG4Q9BZD6 226 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 RASSF1Q9NS23 344 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 MED17Q9NVC6 651 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 NKIRAS1Q9NYS0 192 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 PACSIN3Q9UKS6 424 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 ZNF175Q9Y473 711 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 DTNAQ9Y4J8 743 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 NUP214P35658 2090 aaPredicted RBP6.67□□□□□ -1.34
NUP88-205ENST00000572809 DOCK7Q96N67 2140 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 NPIPA5A0A0B4J1W7 369 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 GOLGA8QA0A0J9YX86 632 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 A0A1W2PNV4 684 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 C7orf72A4D263 438 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 GOLGA8OA6NCC3 632 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 TRPC5OSA6NMA1 111 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 A6NNC1 897 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 NPIPA7E9PJI5 369 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 GOLGA8NF8WBI6 632 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 SLCO1B7G3V0H7 640 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 SDHDO14521 159 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 HDAC3O15379 428 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 FCMRO60667 390 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 SNNO75324 88 aaPredicted RBP6.67□□□□□ -1.34
NUP88-205ENST00000572809 TNFSF13O75888 250 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 NUDT14O95848 222 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 AGR2O95994 175 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 AK1P00568 194 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 OPN1LWP04000 364 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 CD3EP07766 207 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 LINGO3P0C6S8 592 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 NPIPA8P0DM63 369 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 KITP10721 976 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 CPEP16870 476 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 ZNF17P17021 662 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 PSMA4P25789 261 aaKnown RBP6.67□□□□□ -1.34
NUP88-205ENST00000572809 EPHA3P29320 983 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 S100A3P33764 101 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 EIF1P41567 113 aaKnown RBP6.67□□□□□ -1.34
NUP88-205ENST00000572809 KIR2DL2P43627 348 aaPredicted RBP6.67□□□□□ -1.34
NUP88-205ENST00000572809 CPA2P48052 419 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 CLNS1AP54105 237 aaKnown RBP6.67□□□□□ -1.34
NUP88-205ENST00000572809 CASP9P55211 416 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 NME5P56597 212 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 PCBP3P57721 371 aaKnown RBP6.67□□□□□ -1.34
NUP88-205ENST00000572809 UFM1P61960 85 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 SORDQ00796 357 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 ZNF117Q03924 483 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 CASP8Q14790 479 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 PON3Q15166 354 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 GPR68Q15743 365 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 PLPPR5Q32ZL2 321 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 ARHGAP11BQ3KRB8 267 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 SPANXN4Q5MJ08 99 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 SLC35F1Q5T1Q4 408 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 PDSS1Q5T2R2 415 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 CBLN3Q6UW01 205 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 GGNQ86UU5 652 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 TSPYL5Q86VY4 417 aaPredicted RBP6.67□□□□□ -1.34
NUP88-205ENST00000572809 ANKRD46Q86W74 232 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 LILRA2Q8N149 483 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 METTL25Q8N6Q8 603 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 ZNF614Q8N883 585 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 CNEP1R1Q8N9A8 125 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 CHDHQ8NE62 594 aaPredicted RBP6.67□□□□□ -1.34
NUP88-205ENST00000572809 OR5D16Q8NGK9 328 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 FNDC9Q8TBE3 224 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 RAB3IL1Q8TBN0 382 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 POC1BQ8TC44 478 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 XAGE5Q8WWM1 108 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 TLCD1Q96CP7 247 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 SLC35G5Q96KT7 338 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 TEX37Q96LM6 180 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 RNF145Q96MT1 663 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 NPAS1Q99742 590 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 GPATCH1Q9BRR8 931 aaKnown RBP6.67□□□□□ -1.34
NUP88-205ENST00000572809 KRTAP4-5Q9BYR2 181 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 OR51I1Q9H343 314 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 WDR55Q9H6Y2 383 aaPredicted RBP6.67□□□□□ -1.34
NUP88-205ENST00000572809 RNF122Q9H9V4 155 aa6.67□□□□□ -1.34
NUP88-205ENST00000572809 EXD2Q9NVH0 621 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms