RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.89■□□□□ 0.13
CTDNEP1-207ENST00000572043 CCM2LQ9NUG4 571 aaPredicted RBP15.89■□□□□ 0.13
CTDNEP1-207ENST00000572043 INTS9Q9NV88 658 aaKnown RBP15.89■□□□□ 0.13
CTDNEP1-207ENST00000572043 ELOVL5Q9NYP7 299 aa15.89■□□□□ 0.13
CTDNEP1-207ENST00000572043 C6orf203Q9P0P8 240 aaPredicted RBP15.89■□□□□ 0.13
CTDNEP1-207ENST00000572043 LIPT1Q9Y234 373 aa15.89■□□□□ 0.13
CTDNEP1-207ENST00000572043 TESMINQ9Y4I5 508 aa15.89■□□□□ 0.13
CTDNEP1-207ENST00000572043 CSMD2Q7Z408 3487 aa15.88■□□□□ 0.13
CTDNEP1-207ENST00000572043 HMGB1P1B2RPK0 211 aaPredicted RBP15.88■□□□□ 0.13
CTDNEP1-207ENST00000572043 C16orf97H3BN30 126 aa15.88■□□□□ 0.13
CTDNEP1-207ENST00000572043 GUSBP08236 651 aa15.88■□□□□ 0.13
CTDNEP1-207ENST00000572043 H2AFXP16104 143 aaPredicted RBP15.88■□□□□ 0.13
CTDNEP1-207ENST00000572043 CCNA2P20248 432 aa15.88■□□□□ 0.13
CTDNEP1-207ENST00000572043 ENPP1P22413 925 aa15.88■□□□□ 0.13
CTDNEP1-207ENST00000572043 AGTR1P30556 359 aa15.88■□□□□ 0.13
CTDNEP1-207ENST00000572043 AQP5P55064 265 aa15.88■□□□□ 0.13
CTDNEP1-207ENST00000572043 PPP2R2AP63151 447 aa15.88■□□□□ 0.13
CTDNEP1-207ENST00000572043 KCNJ10P78508 379 aa15.88■□□□□ 0.13
CTDNEP1-207ENST00000572043 PLAURQ03405 335 aa15.88■□□□□ 0.13
CTDNEP1-207ENST00000572043 SLC25A53Q5H9E4 307 aa15.88■□□□□ 0.13
CTDNEP1-207ENST00000572043 PLEKHM3Q6ZWE6 761 aa15.88■□□□□ 0.13
CTDNEP1-207ENST00000572043 FCRLAQ7L513 359 aa15.88■□□□□ 0.13
CTDNEP1-207ENST00000572043 ARFGAP2Q8N6H7 521 aa15.88■□□□□ 0.13
CTDNEP1-207ENST00000572043 RNF128Q8TEB7 428 aa15.88■□□□□ 0.13
CTDNEP1-207ENST00000572043 TMEM234Q8WY98 164 aa15.88■□□□□ 0.13
CTDNEP1-207ENST00000572043 ST8SIA1Q92185 356 aa15.88■□□□□ 0.13
CTDNEP1-207ENST00000572043 CNOT9Q92600 299 aaKnown RBP15.88■□□□□ 0.13
CTDNEP1-207ENST00000572043 MED18Q9BUE0 208 aa15.88■□□□□ 0.13
CTDNEP1-207ENST00000572043 TPT1P8Q9HAU6 139 aa15.88■□□□□ 0.13
CTDNEP1-207ENST00000572043 SERINC1Q9NRX5 453 aa15.88■□□□□ 0.13
CTDNEP1-207ENST00000572043 ST6GALNAC2Q9UJ37 374 aa15.88■□□□□ 0.13
CTDNEP1-207ENST00000572043 FAM234BA2RU67 622 aa15.87■□□□□ 0.13
CTDNEP1-207ENST00000572043 AGAP5A6NIR3 686 aa15.87■□□□□ 0.13
CTDNEP1-207ENST00000572043 AP3D1O14617 1153 aa15.87■□□□□ 0.13
CTDNEP1-207ENST00000572043 HRGP04196 525 aa15.87■□□□□ 0.13
CTDNEP1-207ENST00000572043 BCHEP06276 602 aa15.87■□□□□ 0.13
CTDNEP1-207ENST00000572043 TFPIP10646 304 aa15.87■□□□□ 0.13
CTDNEP1-207ENST00000572043 KLK2P20151 261 aa15.87■□□□□ 0.13
CTDNEP1-207ENST00000572043 TMEM201Q5SNT2 666 aa15.87■□□□□ 0.13
CTDNEP1-207ENST00000572043 GTF2IRD2BQ6EKJ0 949 aa15.87■□□□□ 0.13
CTDNEP1-207ENST00000572043 C3orf33Q6P1S2 294 aa15.87■□□□□ 0.13
CTDNEP1-207ENST00000572043 LRRC74BQ6ZQY2 392 aa15.87■□□□□ 0.13
CTDNEP1-207ENST00000572043 GTF2IRD2Q86UP8 949 aa15.87■□□□□ 0.13
CTDNEP1-207ENST00000572043 TUSC5Q8IXB3 177 aa15.87■□□□□ 0.13
CTDNEP1-207ENST00000572043 FAM71CQ8NEG0 241 aa15.87■□□□□ 0.13
CTDNEP1-207ENST00000572043 WDR60Q8WVS4 1066 aa15.87■□□□□ 0.13
CTDNEP1-207ENST00000572043 DOCK7Q96N67 2140 aa15.87■□□□□ 0.13
CTDNEP1-207ENST00000572043 CTPS2Q9NRF8 586 aa15.87■□□□□ 0.13
CTDNEP1-207ENST00000572043 PLSCR4Q9NRQ2 329 aa15.87■□□□□ 0.13
CTDNEP1-207ENST00000572043 GLRX2Q9NS18 164 aa15.87■□□□□ 0.13
CTDNEP1-207ENST00000572043 ACER3Q9NUN7 267 aa15.87■□□□□ 0.13
CTDNEP1-207ENST00000572043 P2RX2Q9UBL9 471 aa15.87■□□□□ 0.13
CTDNEP1-207ENST00000572043 CENPEQ02224 2701 aa15.87■□□□□ 0.13
CTDNEP1-207ENST00000572043 PCNX3Q9H6A9 2034 aa15.86■□□□□ 0.13
CTDNEP1-207ENST00000572043 ETV2O00321 342 aaPredicted RBP15.86■□□□□ 0.13
CTDNEP1-207ENST00000572043 NR5A2O00482 541 aa15.86■□□□□ 0.13
CTDNEP1-207ENST00000572043 DNAJA2O60884 412 aa15.86■□□□□ 0.13
CTDNEP1-207ENST00000572043 ADAM11O75078 769 aa15.86■□□□□ 0.13
CTDNEP1-207ENST00000572043 SASH3O75995 380 aa15.86■□□□□ 0.13
CTDNEP1-207ENST00000572043 TGDSO95455 350 aa15.86■□□□□ 0.13
CTDNEP1-207ENST00000572043 PABPC4LP0CB38 370 aaKnown RBP15.86■□□□□ 0.13
CTDNEP1-207ENST00000572043 IL7RP16871 459 aa15.86■□□□□ 0.13
CTDNEP1-207ENST00000572043 IDH2P48735 452 aaKnown RBP15.86■□□□□ 0.13
CTDNEP1-207ENST00000572043 MVDP53602 400 aa15.86■□□□□ 0.13
CTDNEP1-207ENST00000572043 DSTNP60981 165 aa15.86■□□□□ 0.13
CTDNEP1-207ENST00000572043 TXNL4AP83876 142 aaKnown RBP15.86■□□□□ 0.13
CTDNEP1-207ENST00000572043 TESK1Q15569 626 aa15.86■□□□□ 0.13
CTDNEP1-207ENST00000572043 MAPK11Q15759 364 aa15.86■□□□□ 0.13
CTDNEP1-207ENST00000572043 RPS26P11Q5JNZ5 115 aaPredicted RBP15.86■□□□□ 0.13
CTDNEP1-207ENST00000572043 NUFIP2Q7Z417 695 aaKnown RBP15.86■□□□□ 0.13
CTDNEP1-207ENST00000572043 VIPAS39Q9H9C1 493 aa15.86■□□□□ 0.13
CTDNEP1-207ENST00000572043 CCDC167Q9P0B6 97 aa15.86■□□□□ 0.13
CTDNEP1-207ENST00000572043 APCP25054 2843 aa15.85■□□□□ 0.13
CTDNEP1-207ENST00000572043 A0A1W2PPR1 153 aa15.85■□□□□ 0.13
CTDNEP1-207ENST00000572043 PRKD3O94806 890 aa15.85■□□□□ 0.13
CTDNEP1-207ENST00000572043 ZCCHC18P0CG32 403 aa15.85■□□□□ 0.13
CTDNEP1-207ENST00000572043 NID1P14543 1247 aa15.85■□□□□ 0.13
CTDNEP1-207ENST00000572043 RAC3P60763 192 aa15.85■□□□□ 0.13
CTDNEP1-207ENST00000572043 RNPS1Q15287 305 aaKnown RBP15.85■□□□□ 0.13
CTDNEP1-207ENST00000572043 MRPL2Q5T653 305 aaKnown RBP15.85■□□□□ 0.13
CTDNEP1-207ENST00000572043 MSANTD1Q6ZTZ1 278 aa15.85■□□□□ 0.13
CTDNEP1-207ENST00000572043 C22orf34Q6ZV56 151 aa15.85■□□□□ 0.13
CTDNEP1-207ENST00000572043 STK32CQ86UX6 486 aa15.85■□□□□ 0.13
CTDNEP1-207ENST00000572043 VRK2Q86Y07 508 aa15.85■□□□□ 0.13
CTDNEP1-207ENST00000572043 CKAP2Q8WWK9 683 aa15.85■□□□□ 0.13
CTDNEP1-207ENST00000572043 OIT3Q8WWZ8 545 aa15.85■□□□□ 0.13
CTDNEP1-207ENST00000572043 GTF2H4Q92759 462 aa15.85■□□□□ 0.13
CTDNEP1-207ENST00000572043 ZNF775Q96BV0 537 aaPredicted RBP15.85■□□□□ 0.13
CTDNEP1-207ENST00000572043 PIK3IP1Q96FE7 263 aa15.85■□□□□ 0.13
CTDNEP1-207ENST00000572043 CCDC28BQ9BUN5 200 aa15.85■□□□□ 0.13
CTDNEP1-207ENST00000572043 PAIP1Q9H074 479 aaKnown RBP15.85■□□□□ 0.13
CTDNEP1-207ENST00000572043 MTHFD2LQ9H903 347 aaPredicted RBP15.85■□□□□ 0.13
CTDNEP1-207ENST00000572043 RLIMQ9NVW2 624 aa15.85■□□□□ 0.13
CTDNEP1-207ENST00000572043 ZNF226Q9NYT6 803 aa15.85■□□□□ 0.13
CTDNEP1-207ENST00000572043 KLHL13Q9P2N7 655 aa15.85■□□□□ 0.13
CTDNEP1-207ENST00000572043 PCDHB14Q9Y5E9 798 aa15.85■□□□□ 0.13
CTDNEP1-207ENST00000572043 ABCA12Q86UK0 2595 aa15.84■□□□□ 0.13
CTDNEP1-207ENST00000572043 SIAH2O43255 324 aa15.84■□□□□ 0.13
CTDNEP1-207ENST00000572043 DBIP07108 87 aaKnown RBP15.84■□□□□ 0.13
CTDNEP1-207ENST00000572043 FESP07332 822 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms