RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 ZNF264O43296 627 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 UGT2B17O75795 530 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 HEXAP06865 529 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 UBL4AP11441 157 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 PPP3CBP16298 524 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 FPR1P21462 350 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 ADH6P28332 368 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 ADSLP30566 484 aaPredicted RBP12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 GPR68Q15743 365 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 HEPHL1Q6MZM0 1159 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 BEND4Q6ZU67 534 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 FCRLAQ7L513 359 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 LRRC34Q8IZ02 419 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 ZNF619Q8N2I2 560 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 NATD1Q8N6N6 113 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 ZNF527Q8NB42 609 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 FAM71CQ8NEG0 241 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 OR5W2Q8NH69 310 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 ZNF75CPQ92670 426 aaPredicted RBP12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 CPNE4Q96A23 557 aaPredicted RBP12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 MRGPRX4Q96LA9 322 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 TEX37Q96LM6 180 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 ZNF300Q96RE9 604 aaPredicted RBP12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 PSD2Q9BQI7 771 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 GSX2Q9BZM3 304 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 NMUR2Q9GZQ4 415 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 ZNF350Q9GZX5 532 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 HOXD1Q9GZZ0 328 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 OR51I1Q9H343 314 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 HHATLQ9HCP6 504 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 STOML1Q9UBI4 398 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 PRSS50Q9UI38 385 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 GPR52Q9Y2T5 361 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 HIVEP2P31629 2446 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 CLDN24A6NM45 220 aa12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 C9JVG2 144 aa12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 GTPBP1O00178 669 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 SMAD7O15105 426 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 EIF4E2O60573 245 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 SNNO75324 88 aaPredicted RBP12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 KRT16P08779 473 aa12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 PAX1P15863 534 aa12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 MATN1P21941 496 aa12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 CCR4P51679 360 aa12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 KRTAP1-1Q07627 177 aa12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 SELENBP1Q13228 472 aa12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 TAB1Q15750 504 aa12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 TIGD2Q4W5G0 525 aa12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 SPANXN4Q5MJ08 99 aa12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 TYW3Q6IPR3 259 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 ALKBH2Q6NS38 261 aa12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 PRSS57Q6UWY2 283 aa12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 FRRS1Q6ZNA5 592 aa12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 TMCO5AQ8N6Q1 288 aa12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 OR8J2Q8NGG1 315 aa12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 MIPOL1Q8TD10 442 aa12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 RAB8BQ92930 207 aa12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 ZNF775Q96BV0 537 aaPredicted RBP12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 MOAP1Q96BY2 351 aa12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 SLC35G5Q96KT7 338 aa12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 THUMPD3Q9BV44 507 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 NUF2Q9BZD4 464 aa12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 LAT2Q9GZY6 243 aa12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 MANSC1Q9H8J5 431 aa12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 MEAF6Q9HAF1 191 aa12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 BCO1Q9HAY6 547 aa12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 ZNF701Q9NV72 531 aaPredicted RBP12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 PNPOQ9NVS9 261 aa12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 FBN1P35555 2871 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-211ENST00000569653 ABCA1O95477 2261 aa12.27□□□□□ -0.44
GTF3C1-211ENST00000569653 SLCO1B7G3V0H7 640 aa12.27□□□□□ -0.45
GTF3C1-211ENST00000569653 RNASET2O00584 256 aaKnown RBP12.27□□□□□ -0.45
GTF3C1-211ENST00000569653 HS3ST1O14792 307 aa12.27□□□□□ -0.45
GTF3C1-211ENST00000569653 ARHGEF9O43307 516 aa12.27□□□□□ -0.45
GTF3C1-211ENST00000569653 KIAA0513O60268 411 aa12.27□□□□□ -0.45
GTF3C1-211ENST00000569653 ADAP00813 363 aa12.27□□□□□ -0.45
GTF3C1-211ENST00000569653 ALDOCP09972 364 aaKnown RBP12.27□□□□□ -0.45
GTF3C1-211ENST00000569653 OR12D1P0DN82 309 aa12.27□□□□□ -0.45
GTF3C1-211ENST00000569653 LBPP18428 481 aa12.27□□□□□ -0.45
GTF3C1-211ENST00000569653 IL12AP29459 219 aa12.27□□□□□ -0.45
GTF3C1-211ENST00000569653 NTF4P34130 210 aa12.27□□□□□ -0.45
GTF3C1-211ENST00000569653 PGM1P36871 562 aa12.27□□□□□ -0.45
GTF3C1-211ENST00000569653 SESN3P58005 492 aa12.27□□□□□ -0.45
GTF3C1-211ENST00000569653 RNPS1Q15287 305 aaKnown RBP12.27□□□□□ -0.45
GTF3C1-211ENST00000569653 ARHGAP11BQ3KRB8 267 aa12.27□□□□□ -0.45
GTF3C1-211ENST00000569653 TMEM201Q5SNT2 666 aa12.27□□□□□ -0.45
GTF3C1-211ENST00000569653 PDSS1Q5T2R2 415 aa12.27□□□□□ -0.45
GTF3C1-211ENST00000569653 SFRP5Q5T4F7 317 aa12.27□□□□□ -0.45
GTF3C1-211ENST00000569653 SAXO2Q658L1 398 aa12.27□□□□□ -0.45
GTF3C1-211ENST00000569653 TNFAIP8L2Q6P589 184 aaPredicted RBP12.27□□□□□ -0.45
GTF3C1-211ENST00000569653 PLEKHM3Q6ZWE6 761 aa12.27□□□□□ -0.45
GTF3C1-211ENST00000569653 PRIMA1Q86XR5 153 aa12.27□□□□□ -0.45
GTF3C1-211ENST00000569653 OR4A15Q8NGL6 344 aa12.27□□□□□ -0.45
GTF3C1-211ENST00000569653 AKAP1Q92667 903 aaKnown RBP eCLIP12.27□□□□□ -0.452e-7■■■■■ 27.7
GTF3C1-211ENST00000569653 DNAJA3Q96EY1 480 aa12.27□□□□□ -0.45
GTF3C1-211ENST00000569653 OR10A4Q9H209 315 aa12.27□□□□□ -0.45
GTF3C1-211ENST00000569653 DPRXA6NFQ7 191 aa12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 TRPC5OSA6NMA1 111 aa12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 H3BNH8 94 aa12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 KLF11O14901 512 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms