RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 C3orf33Q6P1S2 294 aa6.97□□□□□ -1.29
CDH3-209ENST00000569080 SEZ6L2Q6UXD5 910 aa6.97□□□□□ -1.29
CDH3-209ENST00000569080 DNAJC14Q6Y2X3 702 aaPredicted RBP6.97□□□□□ -1.29
CDH3-209ENST00000569080 EIF3MQ7L2H7 374 aaKnown RBP6.97□□□□□ -1.29
CDH3-209ENST00000569080 C16orf62Q7Z3J2 963 aa6.97□□□□□ -1.29
CDH3-209ENST00000569080 HMGN2P46Q86SG4 172 aa6.97□□□□□ -1.29
CDH3-209ENST00000569080 CXorf67Q86X51 503 aaPredicted RBP6.97□□□□□ -1.29
CDH3-209ENST00000569080 RNF130Q86XS8 419 aa6.97□□□□□ -1.29
CDH3-209ENST00000569080 GABRG1Q8N1C3 465 aa6.97□□□□□ -1.29
CDH3-209ENST00000569080 ZNF619Q8N2I2 560 aa6.97□□□□□ -1.29
CDH3-209ENST00000569080 ANKFN1Q8N957 763 aa6.97□□□□□ -1.29
CDH3-209ENST00000569080 GLB1L3Q8NCI6 653 aaPredicted RBP6.97□□□□□ -1.29
CDH3-209ENST00000569080 VPS37AQ8NEZ2 397 aa6.97□□□□□ -1.29
CDH3-209ENST00000569080 OR9I1Q8NGQ6 314 aa6.97□□□□□ -1.29
CDH3-209ENST00000569080 RFWD2Q8NHY2 731 aa6.97□□□□□ -1.29
CDH3-209ENST00000569080 PIWIL2Q8TC59 973 aaKnown RBP6.97□□□□□ -1.29
CDH3-209ENST00000569080 XAGE5Q8WWM1 108 aa6.97□□□□□ -1.29
CDH3-209ENST00000569080 ROBO4Q8WZ75 1007 aa6.97□□□□□ -1.29
CDH3-209ENST00000569080 OSTF1Q92882 214 aa6.97□□□□□ -1.29
CDH3-209ENST00000569080 OR52E6Q96RD3 313 aa6.97□□□□□ -1.29
CDH3-209ENST00000569080 PANX1Q96RD7 426 aa6.97□□□□□ -1.29
CDH3-209ENST00000569080 PSD2Q9BQI7 771 aa6.97□□□□□ -1.29
CDH3-209ENST00000569080 SLC39A3Q9BRY0 314 aa6.97□□□□□ -1.29
CDH3-209ENST00000569080 THUMPD3Q9BV44 507 aaKnown RBP6.97□□□□□ -1.29
CDH3-209ENST00000569080 TMUB1Q9BVT8 246 aa6.97□□□□□ -1.29
CDH3-209ENST00000569080 CCDC106Q9BWC9 280 aa6.97□□□□□ -1.29
CDH3-209ENST00000569080 MANSC1Q9H8J5 431 aa6.97□□□□□ -1.29
CDH3-209ENST00000569080 GP6Q9HCN6 339 aa6.97□□□□□ -1.29
CDH3-209ENST00000569080 EXOSC3Q9NQT5 275 aaKnown RBP6.97□□□□□ -1.29
CDH3-209ENST00000569080 DLL4Q9NR61 685 aa6.97□□□□□ -1.29
CDH3-209ENST00000569080 GLRX2Q9NS18 164 aa6.97□□□□□ -1.29
CDH3-209ENST00000569080 EXD2Q9NVH0 621 aa6.97□□□□□ -1.29
CDH3-209ENST00000569080 NKIRAS1Q9NYS0 192 aa6.97□□□□□ -1.29
CDH3-209ENST00000569080 STOML1Q9UBI4 398 aa6.97□□□□□ -1.29
CDH3-209ENST00000569080 PCDHGB4Q9UN71 923 aa6.97□□□□□ -1.29
CDH3-209ENST00000569080 SLC35A3Q9Y2D2 325 aa6.97□□□□□ -1.29
CDH3-209ENST00000569080 NIPBLQ6KC79 2804 aaeCLIP6.96□□□□□ -1.29
CDH3-209ENST00000569080 NSD1Q96L73 2696 aaPredicted RBP6.96□□□□□ -1.29
CDH3-209ENST00000569080 DNHD1Q96M86 4753 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 IGHV3-15A0A0B4J1V0 119 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 CCDC154A6NI56 674 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 AGAP5A6NIR3 686 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 GJE1A6NN92 205 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 GTPBP1O00178 669 aaKnown RBP6.96□□□□□ -1.3
CDH3-209ENST00000569080 KLF4O43474 513 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 PLGP00747 810 aaPredicted RBP6.96□□□□□ -1.3
CDH3-209ENST00000569080 GSNP06396 782 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 ZCCHC18P0CG32 403 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 PSMB1P20618 241 aaKnown RBP6.96□□□□□ -1.3
CDH3-209ENST00000569080 ENPP1P22413 925 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 CHI3L1P36222 383 aaPredicted RBP6.96□□□□□ -1.3
CDH3-209ENST00000569080 CTBP2P56545 445 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 CARD18P57730 90 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 RAC3P60763 192 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 TXNL4AP83876 142 aaKnown RBP6.96□□□□□ -1.3
CDH3-209ENST00000569080 LRRC74AQ0VAA2 488 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 RNPS1Q15287 305 aaKnown RBP6.96□□□□□ -1.3
CDH3-209ENST00000569080 EXOC3L2Q2M3D2 409 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 DEFB113Q30KQ7 82 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 TMEM176BQ3YBM2 270 aaPredicted RBP6.96□□□□□ -1.3
CDH3-209ENST00000569080 TIGD2Q4W5G0 525 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 SYT14P1Q58G82 188 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 TTMPQ5BVD1 217 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 PDSS1Q5T2R2 415 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 ATAD3BQ5T9A4 648 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 PPP4R4Q6NUP7 873 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 MSANTD1Q6ZTZ1 278 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 PLEKHM3Q6ZWE6 761 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 FCRLAQ7L513 359 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 NUFIP2Q7Z417 695 aaKnown RBP6.96□□□□□ -1.3
CDH3-209ENST00000569080 TGIF2LYQ8IUE0 185 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 TUSC5Q8IXB3 177 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 PNPT1Q8TCS8 783 aaKnown RBP6.96□□□□□ -1.3
CDH3-209ENST00000569080 IGFBPL1Q8WX77 278 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 ZNF75CPQ92670 426 aaPredicted RBP6.96□□□□□ -1.3
CDH3-209ENST00000569080 VPS33AQ96AX1 596 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 AURKBQ96GD4 344 aaPredicted RBP6.96□□□□□ -1.3
CDH3-209ENST00000569080 C7orf26Q96N11 449 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 TRNT1Q96Q11 434 aaKnown RBP6.96□□□□□ -1.3
CDH3-209ENST00000569080 MED18Q9BUE0 208 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 PRRG4Q9BZD6 226 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 C12orf49Q9H741 205 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 BCO1Q9HAY6 547 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 SLCO1B3Q9NPD5 702 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 ACER3Q9NUN7 267 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 ZNF226Q9NYT6 803 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 ZIM2Q9NZV7 527 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 NDRG3Q9UGV2 375 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 USH1CQ9Y6N9 552 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 ROS1P08922 2347 aa6.96□□□□□ -1.3
CDH3-209ENST00000569080 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.95□□□□□ -1.3
CDH3-209ENST00000569080 ZNF814B7Z6K7 855 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 FAAHO00519 579 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 RFXANKO14593 260 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 AP3D1O14617 1153 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 CYTIPO60759 359 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 SLC22A3O75751 556 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 CYP7B1O75881 506 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 IL6P05231 212 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 FESP07332 822 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms