RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 TIGD2Q4W5G0 525 aa12.11□□□□□ -0.47
CNOT1-215ENST00000569020 EMBQ6PCB8 327 aa12.11□□□□□ -0.47
CNOT1-215ENST00000569020 SSX8Q7RTT4 187 aa12.11□□□□□ -0.47
CNOT1-215ENST00000569020 RIMKLAQ8IXN7 391 aa12.11□□□□□ -0.47
CNOT1-215ENST00000569020 PIWIL2Q8TC59 973 aaKnown RBP12.11□□□□□ -0.47
CNOT1-215ENST00000569020 TMEM234Q8WY98 164 aa12.11□□□□□ -0.47
CNOT1-215ENST00000569020 ST8SIA1Q92185 356 aa12.11□□□□□ -0.47
CNOT1-215ENST00000569020 THUMPD3Q9BV44 507 aaKnown RBP12.11□□□□□ -0.47
CNOT1-215ENST00000569020 LAT2Q9GZY6 243 aa12.11□□□□□ -0.47
CNOT1-215ENST00000569020 ALG2Q9H553 416 aa12.11□□□□□ -0.47
CNOT1-215ENST00000569020 PRSS50Q9UI38 385 aa12.11□□□□□ -0.47
CNOT1-215ENST00000569020 PCDHGB4Q9UN71 923 aa12.11□□□□□ -0.47
CNOT1-215ENST00000569020 LIPT1Q9Y234 373 aa12.11□□□□□ -0.47
CNOT1-215ENST00000569020 MAGED1Q9Y5V3 778 aaPredicted RBP12.11□□□□□ -0.47
CNOT1-215ENST00000569020 USF3Q68DE3 2245 aa12.11□□□□□ -0.47
CNOT1-215ENST00000569020 ROS1P08922 2347 aa12.1□□□□□ -0.47
CNOT1-215ENST00000569020 ZNF724A8MTY0 619 aa12.1□□□□□ -0.47
CNOT1-215ENST00000569020 RNF223E7ERA6 249 aa12.1□□□□□ -0.47
CNOT1-215ENST00000569020 ETV2O00321 342 aaPredicted RBP12.1□□□□□ -0.47
CNOT1-215ENST00000569020 SMAD9O15198 467 aaKnown RBP12.1□□□□□ -0.47
CNOT1-215ENST00000569020 LYZL6O75951 148 aa12.1□□□□□ -0.47
CNOT1-215ENST00000569020 CSTAP01040 98 aa12.1□□□□□ -0.47
CNOT1-215ENST00000569020 PGCP20142 388 aa12.1□□□□□ -0.47
CNOT1-215ENST00000569020 CLDN8P56748 225 aa12.1□□□□□ -0.47
CNOT1-215ENST00000569020 C21orf58P58505 322 aa12.1□□□□□ -0.47
CNOT1-215ENST00000569020 RPS26P62854 115 aaKnown RBP12.1□□□□□ -0.47
CNOT1-215ENST00000569020 CSNK2A1P68400 391 aaPredicted RBP12.1□□□□□ -0.47
CNOT1-215ENST00000569020 SKP2Q13309 424 aa12.1□□□□□ -0.47
CNOT1-215ENST00000569020 PPA1Q15181 289 aa12.1□□□□□ -0.47
CNOT1-215ENST00000569020 STK11Q15831 433 aa12.1□□□□□ -0.47
CNOT1-215ENST00000569020 ZNF141Q15928 474 aa12.1□□□□□ -0.47
CNOT1-215ENST00000569020 ARHGAP11BQ3KRB8 267 aa12.1□□□□□ -0.47
CNOT1-215ENST00000569020 DNAJC14Q6Y2X3 702 aaPredicted RBP12.1□□□□□ -0.47
CNOT1-215ENST00000569020 C16orf62Q7Z3J2 963 aa12.1□□□□□ -0.47
CNOT1-215ENST00000569020 C6orf120Q7Z4R8 191 aa12.1□□□□□ -0.47
CNOT1-215ENST00000569020 ZNF100Q8IYN0 542 aa12.1□□□□□ -0.47
CNOT1-215ENST00000569020 KBTBD8Q8NFY9 601 aa12.1□□□□□ -0.47
CNOT1-215ENST00000569020 NEUROG1Q92886 237 aa12.1□□□□□ -0.47
CNOT1-215ENST00000569020 ZNF524Q96C55 264 aa12.1□□□□□ -0.47
CNOT1-215ENST00000569020 MUCL1Q96DR8 90 aa12.1□□□□□ -0.47
CNOT1-215ENST00000569020 SLC35G5Q96KT7 338 aa12.1□□□□□ -0.47
CNOT1-215ENST00000569020 ZNF300Q96RE9 604 aaPredicted RBP12.1□□□□□ -0.47
CNOT1-215ENST00000569020 MDFIQ99750 246 aa12.1□□□□□ -0.47
CNOT1-215ENST00000569020 QRSL1Q9H0R6 528 aaKnown RBP12.1□□□□□ -0.47
CNOT1-215ENST00000569020 EXD2Q9NVH0 621 aa12.1□□□□□ -0.47
CNOT1-215ENST00000569020 FAIMQ9NVQ4 179 aa12.1□□□□□ -0.47
CNOT1-215ENST00000569020 CISD1Q9NZ45 108 aaKnown RBP12.1□□□□□ -0.47
CNOT1-215ENST00000569020 NOP53Q9NZM5 478 aaKnown RBP12.1□□□□□ -0.47
CNOT1-215ENST00000569020 LGALS13Q9UHV8 139 aa12.1□□□□□ -0.47
CNOT1-215ENST00000569020 ING1Q9UK53 422 aaPredicted RBP12.1□□□□□ -0.47
CNOT1-215ENST00000569020 RNF103-CHMP3A0A140T963 221 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 DPRXA6NFQ7 191 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 C9JVG2 144 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 SULT2B1O00204 365 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 RNASET2O00584 256 aaKnown RBP12.09□□□□□ -0.47
CNOT1-215ENST00000569020 FCMRO60667 390 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 DNAJA2O60884 412 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 CRLF1O75462 422 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 UGT2B17O75795 530 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 H6PDO95479 791 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 AGR2O95994 175 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 TP53P04637 393 aaPredicted RBP12.09□□□□□ -0.47
CNOT1-215ENST00000569020 UBTFL6P0CB48 400 aaPredicted RBP12.09□□□□□ -0.47
CNOT1-215ENST00000569020 GGT1P19440 569 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 ARRB2P32121 409 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 DIO1P49895 249 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 SESN3P58005 492 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 EMX2Q04743 252 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 DMTNQ08495 405 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 MERTKQ12866 999 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 FAPQ12884 760 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 SMU1Q2TAY7 513 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 SYT14P1Q58G82 188 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 TIMM23BQ5SRD1 257 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 OR4F3Q6IEY1 312 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 TMPPEQ6ZT21 453 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 EIF3MQ7L2H7 374 aaKnown RBP12.09□□□□□ -0.47
CNOT1-215ENST00000569020 GALNT5Q7Z7M9 940 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 ATG4DQ86TL0 474 aaPredicted RBP12.09□□□□□ -0.47
CNOT1-215ENST00000569020 P2RY8Q86VZ1 359 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 CLECL1Q8IZS7 167 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 SLC25A43Q8WUT9 341 aaPredicted RBP12.09□□□□□ -0.47
CNOT1-215ENST00000569020 ZNF775Q96BV0 537 aaPredicted RBP12.09□□□□□ -0.47
CNOT1-215ENST00000569020 REG4Q9BYZ8 158 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 ROPN1BQ9BZX4 212 aaPredicted RBP12.09□□□□□ -0.47
CNOT1-215ENST00000569020 TRIM2Q9C040 744 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 SLCO5A1Q9H2Y9 848 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 OR51I1Q9H343 314 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 SERHL2Q9H4I8 314 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 ROPN1Q9HAT0 212 aaPredicted RBP12.09□□□□□ -0.47
CNOT1-215ENST00000569020 ASIC5Q9NY37 505 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 KCNE5Q9UJ90 142 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 ADAM21Q9UKJ8 722 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 MKLN1Q9UL63 735 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 SPIN1Q9Y657 262 aaPredicted RBP12.09□□□□□ -0.47
CNOT1-215ENST00000569020 HIVEP2P31629 2446 aa12.09□□□□□ -0.47
CNOT1-215ENST00000569020 BPGMP07738 259 aa12.08□□□□□ -0.48
CNOT1-215ENST00000569020 IGHV1-2P23083 117 aa12.08□□□□□ -0.48
CNOT1-215ENST00000569020 ACVR1BP36896 505 aa12.08□□□□□ -0.48
CNOT1-215ENST00000569020 APOBEC1P41238 236 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms