RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 OR4F15Q8NGB8 312 aa7.08□□□□□ -1.28
ATXN3-250ENST00000568290 OR4E2Q8NGC2 313 aa7.08□□□□□ -1.28
ATXN3-250ENST00000568290 ZNF671Q8TAW3 534 aa7.08□□□□□ -1.28
ATXN3-250ENST00000568290 ABHD4Q8TB40 342 aa7.08□□□□□ -1.28
ATXN3-250ENST00000568290 TRMT10AQ8TBZ6 339 aaKnown RBP7.08□□□□□ -1.28
ATXN3-250ENST00000568290 ZNF431Q8TF32 576 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-250ENST00000568290 ZDHHC1Q8WTX9 485 aa7.08□□□□□ -1.28
ATXN3-250ENST00000568290 SMPDL3BQ92485 455 aa7.08□□□□□ -1.28
ATXN3-250ENST00000568290 NSMAFQ92636 917 aa7.08□□□□□ -1.28
ATXN3-250ENST00000568290 CDS1Q92903 461 aa7.08□□□□□ -1.28
ATXN3-250ENST00000568290 FGF13Q92913 245 aa7.08□□□□□ -1.28
ATXN3-250ENST00000568290 FAM131CQ96AQ9 280 aa7.08□□□□□ -1.28
ATXN3-250ENST00000568290 PHF21AQ96BD5 680 aa7.08□□□□□ -1.28
ATXN3-250ENST00000568290 S100A16Q96FQ6 103 aaKnown RBP7.08□□□□□ -1.28
ATXN3-250ENST00000568290 SMIM10Q96HG1 83 aa7.08□□□□□ -1.28
ATXN3-250ENST00000568290 MED30Q96HR3 178 aa7.08□□□□□ -1.28
ATXN3-250ENST00000568290 NEDD4LQ96PU5 975 aa7.08□□□□□ -1.28
ATXN3-250ENST00000568290 LMF2Q9BU23 707 aaKnown RBP7.08□□□□□ -1.28
ATXN3-250ENST00000568290 GSDMCQ9BYG8 508 aa7.08□□□□□ -1.28
ATXN3-250ENST00000568290 PLA2G12AQ9BZM1 189 aa7.08□□□□□ -1.28
ATXN3-250ENST00000568290 SLC28A3Q9HAS3 691 aa7.08□□□□□ -1.28
ATXN3-250ENST00000568290 RANGRFQ9HD47 186 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-250ENST00000568290 Q9N2J8 555 aa7.08□□□□□ -1.28
ATXN3-250ENST00000568290 HINT3Q9NQE9 182 aaKnown RBP7.08□□□□□ -1.28
ATXN3-250ENST00000568290 KLHL1Q9NR64 748 aa7.08□□□□□ -1.28
ATXN3-250ENST00000568290 NLKQ9UBE8 527 aa7.08□□□□□ -1.28
ATXN3-250ENST00000568290 PRODH2Q9UF12 536 aa7.08□□□□□ -1.28
ATXN3-250ENST00000568290 SERTAD3Q9UJW9 196 aa7.08□□□□□ -1.28
ATXN3-250ENST00000568290 CARD8Q9Y2G2 431 aa7.08□□□□□ -1.28
ATXN3-250ENST00000568290 PRKAB1Q9Y478 270 aa7.08□□□□□ -1.28
ATXN3-250ENST00000568290 OR1A2Q9Y585 309 aa7.08□□□□□ -1.28
ATXN3-250ENST00000568290 ETV7Q9Y603 341 aa7.08□□□□□ -1.28
ATXN3-250ENST00000568290 HS3ST3A1Q9Y663 406 aa7.08□□□□□ -1.28
ATXN3-250ENST00000568290 SESN1Q9Y6P5 492 aa7.08□□□□□ -1.28
ATXN3-250ENST00000568290 DENND4AQ7Z401 1863 aa7.08□□□□□ -1.28
ATXN3-250ENST00000568290 IGKV1-8A0A0C4DH67 115 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 A0A0G2JN53 185 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 A0A0J9YY10 115 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 A0A1W2PP55 124 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 C7orf66A4D0T2 115 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 LINC01553A4QN01 128 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 J3QLW9 94 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 ARPC3O15145 178 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 OGG1O15527 345 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 BRINP1O60477 761 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 SRPX2O60687 465 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-250ENST00000568290 PRAMEF2O60811 474 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 ZNF780AO75290 641 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-250ENST00000568290 NKX2-2O95096 273 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 CH25HO95992 272 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 TNFP01375 233 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 RAF1P04049 648 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 IGFBP1P08833 259 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-250ENST00000568290 CLEC2LP0C7M8 214 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 C8orf89P0DMQ9 161 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 CALCBP10092 127 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 ZNF19P17023 458 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 HNRNPA2B1P22626 353 aaKnown RBP7.07□□□□□ -1.28
ATXN3-250ENST00000568290 GRK6P43250 576 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 TGM4P49221 684 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 GMFBP60983 142 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 MLLT1Q03111 559 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-250ENST00000568290 SSBP1Q04837 148 aaKnown RBP7.07□□□□□ -1.28
ATXN3-250ENST00000568290 MAP4K2Q12851 820 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 ZNF155Q12901 538 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-250ENST00000568290 EIF2B5Q13144 721 aaKnown RBP7.07□□□□□ -1.28
ATXN3-250ENST00000568290 SNTB2Q13425 540 aaKnown RBP7.07□□□□□ -1.28
ATXN3-250ENST00000568290 SERTAD2Q14140 314 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 NDUFAF6Q330K2 333 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 ZNF791Q3KP31 576 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-250ENST00000568290 FLYWCH1Q4VC44 716 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 ACSM3Q53FZ2 586 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 ZMAT1Q5H9K5 638 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 EMC4Q5J8M3 183 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 CEP78Q5JTW2 689 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 SNAP47Q5SQN1 464 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 MRPL2Q5T653 305 aaKnown RBP7.07□□□□□ -1.28
ATXN3-250ENST00000568290 ARL9Q6T311 187 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 PAQR6Q6TCH4 344 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 BTN2A1Q7KYR7 527 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 KRT74Q7RTS7 529 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 PXKQ7Z7A4 578 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 UBE2Q1Q7Z7E8 422 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 JAZF1Q86VZ6 243 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 NKAIN4Q8IVV8 208 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 SLC35F3Q8IY50 421 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 ZNF595Q8IYB9 648 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 SLC7A5P1Q8MH63 180 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 OR6V1Q8N148 313 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 FAM98AQ8NCA5 519 aaKnown RBP7.07□□□□□ -1.28
ATXN3-250ENST00000568290 SLC16A11Q8NCK7 471 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 OR8D4Q8NGM9 314 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 OR4Q3Q8NH05 313 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 TMEM255BQ8WV15 326 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 KAT2AQ92830 837 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 DACT3Q96B18 629 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-250ENST00000568290 TRIM43Q96BQ3 446 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-250ENST00000568290 VWCEQ96DN2 955 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 SMIM19Q96E16 107 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 SGTBQ96EQ0 304 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms