RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 POGLUT1Q8NBL1 392 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 ELOA3Q8NG57 546 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 OR2T33Q8NG76 320 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 C12orf43Q96C57 262 aaKnown RBP6.48□□□□□ -1.37
SMG1-215ENST00000568239 HSPBAP1Q96EW2 488 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 VMP1Q96GC9 406 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 MPP4Q96JB8 637 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 HS6ST2Q96MM7 605 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 TUBA1CQ9BQE3 449 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 IFT27Q9BW83 186 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 PRRG3Q9BZD7 231 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 ACOT13Q9NPJ3 140 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 IL20Q9NYY1 176 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 NPFFR2Q9Y5X5 522 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 SH3D21A4FU49 640 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 TSPAN2O60636 221 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 LYPD3O95274 346 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 SLC2A10O95528 541 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 ZNF806P0C7X5 589 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 JUNBP17275 347 aaPredicted RBP6.47□□□□□ -1.37
SMG1-215ENST00000568239 PCSK6P29122 969 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 NOS3P29474 1203 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 FBXW4P57775 412 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 SNRPGP62308 76 aaKnown RBP6.47□□□□□ -1.37
SMG1-215ENST00000568239 PRKCDQ05655 676 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 FCRLBQ6BAA4 426 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 DHRS13Q6UX07 377 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 ZNF440Q8IYI8 595 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 OR4Q3Q8NH05 313 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 DNAJA4Q8WW22 397 aaPredicted RBP6.47□□□□□ -1.37
SMG1-215ENST00000568239 WDR77Q9BQA1 342 aaPredicted RBP6.47□□□□□ -1.37
SMG1-215ENST00000568239 POLDIP3Q9BY77 421 aaKnown RBP6.47□□□□□ -1.37
SMG1-215ENST00000568239 EVA1AQ9H8M9 152 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 PLCXD1Q9NUJ7 323 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 TMEM5Q9Y2B1 443 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 CDH10Q9Y6N8 788 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 EFCAB10A6NFE3 127 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 FAM183AA6NL82 134 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 KLF4O43474 513 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 ZNF354AO60765 605 aaPredicted RBP6.47□□□□□ -1.37
SMG1-215ENST00000568239 SEC14L2O76054 403 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 STK17BO94768 372 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 CCKBRP32239 447 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 EVI2BP34910 448 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 SLC9A3P48764 834 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 PNLIPRP2P54317 469 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 GP2P55259 537 aaKnown RBP6.47□□□□□ -1.37
SMG1-215ENST00000568239 SLC26A5P58743 744 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 LSM3P62310 102 aaKnown RBP6.47□□□□□ -1.37
SMG1-215ENST00000568239 ZNF117Q03924 483 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 DBPQ10586 325 aaPredicted RBP6.47□□□□□ -1.37
SMG1-215ENST00000568239 SKP2Q13309 424 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 NCF4Q15080 339 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 MED22Q15528 200 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 SYT14P1Q58G82 188 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 GTF2IRD2BQ6EKJ0 949 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 WBP2NLQ6ICG8 309 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 GTF2IRD2Q86UP8 949 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 CYP4Z2PQ8N1L4 340 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 NFAM1Q8NET5 270 aaPredicted RBP6.47□□□□□ -1.37
SMG1-215ENST00000568239 WDR36Q8NI36 951 aaKnown RBP6.47□□□□□ -1.37
SMG1-215ENST00000568239 DUSP19Q8WTR2 217 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 MUL1Q969V5 352 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 C3orf49Q96BT1 292 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 KLHDC3Q9BQ90 382 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 FUNDC2Q9BWH2 189 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 DEFB126Q9BYW3 111 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 ENKD1Q9H0I2 346 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 SLC26A1Q9H2B4 701 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 HHATLQ9HCP6 504 aa6.47□□□□□ -1.37
SMG1-215ENST00000568239 H2AFY2Q9P0M6 372 aaPredicted RBP6.47□□□□□ -1.37
SMG1-215ENST00000568239 NXT1Q9UKK6 140 aaKnown RBP6.47□□□□□ -1.37
SMG1-215ENST00000568239 RPL36Q9Y3U8 105 aaKnown RBP6.47□□□□□ -1.37
SMG1-215ENST00000568239 A0A087WUJ7 227 aa6.46□□□□□ -1.37
SMG1-215ENST00000568239 H3BMQ9 156 aa6.46□□□□□ -1.37
SMG1-215ENST00000568239 TO15178 435 aa6.46□□□□□ -1.37
SMG1-215ENST00000568239 CDC40O60508 579 aaKnown RBP eCLIP6.46□□□□□ -1.37
SMG1-215ENST00000568239 SERPINI2O75830 405 aa6.46□□□□□ -1.37
SMG1-215ENST00000568239 OR2J2O76002 312 aa6.46□□□□□ -1.37
SMG1-215ENST00000568239 ZFAND5O76080 213 aa6.46□□□□□ -1.37
SMG1-215ENST00000568239 RCBTB2O95199 551 aa6.46□□□□□ -1.37
SMG1-215ENST00000568239 DBTP11182 482 aaKnown RBP6.46□□□□□ -1.37
SMG1-215ENST00000568239 TCN2P20062 427 aa6.46□□□□□ -1.37
SMG1-215ENST00000568239 ATP6V1E1P36543 226 aa6.46□□□□□ -1.37
SMG1-215ENST00000568239 SLC16A1P53985 500 aa6.46□□□□□ -1.37
SMG1-215ENST00000568239 INSM1Q01101 510 aaPredicted RBP6.46□□□□□ -1.37
SMG1-215ENST00000568239 ZNF91Q05481 1191 aa6.46□□□□□ -1.37
SMG1-215ENST00000568239 ISXQ2M1V0 245 aa6.46□□□□□ -1.37
SMG1-215ENST00000568239 PGGHGQ32M88 737 aa6.46□□□□□ -1.37
SMG1-215ENST00000568239 GXYLT1Q4G148 440 aa6.46□□□□□ -1.37
SMG1-215ENST00000568239 TMPRSS11FQ6ZWK6 438 aa6.46□□□□□ -1.37
SMG1-215ENST00000568239 SLCO6A1Q86UG4 719 aa6.46□□□□□ -1.37
SMG1-215ENST00000568239 IGFN1Q86VF2 1251 aa6.46□□□□□ -1.37
SMG1-215ENST00000568239 FAM26EQ8N5C1 309 aa6.46□□□□□ -1.37
SMG1-215ENST00000568239 LRRC17Q8N6Y2 441 aa6.46□□□□□ -1.37
SMG1-215ENST00000568239 ANKK1Q8NFD2 765 aa6.46□□□□□ -1.37
SMG1-215ENST00000568239 OR5L2Q8NGL0 311 aa6.46□□□□□ -1.37
SMG1-215ENST00000568239 TMEM163Q8TC26 289 aa6.46□□□□□ -1.37
SMG1-215ENST00000568239 COG8Q96MW5 612 aa6.46□□□□□ -1.37
SMG1-215ENST00000568239 ZNF582Q96NG8 517 aaPredicted RBP6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms