RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 SFTPDP35247 375 aa22.55■■□□□ 1.2
FANCA-228ENST00000567943 DAZAP2Q15038 168 aaPredicted RBP22.55■■□□□ 1.2
FANCA-228ENST00000567943 MAPK11Q15759 364 aa22.55■■□□□ 1.2
FANCA-228ENST00000567943 ESPNLQ6ZVH7 1005 aa22.55■■□□□ 1.2
FANCA-228ENST00000567943 CNEP1R1Q8N9A8 125 aa22.55■■□□□ 1.2
FANCA-228ENST00000567943 KLHL15Q96M94 604 aa22.55■■□□□ 1.2
FANCA-228ENST00000567943 RABEP2Q9H5N1 569 aa22.55■■□□□ 1.2
FANCA-228ENST00000567943 MED4Q9NPJ6 270 aa22.55■■□□□ 1.2
FANCA-228ENST00000567943 RASSF1Q9NS23 344 aa22.55■■□□□ 1.2
FANCA-228ENST00000567943 SLAMF8Q9P0V8 285 aa22.55■■□□□ 1.2
FANCA-228ENST00000567943 VPS13CQ709C8 3753 aa22.54■■□□□ 1.2
FANCA-228ENST00000567943 A6NNC1 897 aa22.54■■□□□ 1.2
FANCA-228ENST00000567943 MSTNO14793 375 aa22.54■■□□□ 1.2
FANCA-228ENST00000567943 DNAJA2O60884 412 aa22.54■■□□□ 1.2
FANCA-228ENST00000567943 NTN1O95631 604 aa22.54■■□□□ 1.2
FANCA-228ENST00000567943 BCHEP06276 602 aa22.54■■□□□ 1.2
FANCA-228ENST00000567943 PGCP20142 388 aa22.54■■□□□ 1.2
FANCA-228ENST00000567943 EEF1A1P68104 462 aaKnown RBP22.54■■□□□ 1.2
FANCA-228ENST00000567943 TESK1Q15569 626 aa22.54■■□□□ 1.2
FANCA-228ENST00000567943 SLC25A53Q5H9E4 307 aa22.54■■□□□ 1.2
FANCA-228ENST00000567943 LRIF1Q5T3J3 769 aa22.54■■□□□ 1.2
FANCA-228ENST00000567943 EEF1A1P5Q5VTE0 462 aa22.54■■□□□ 1.2
FANCA-228ENST00000567943 HBMQ6B0K9 141 aa22.54■■□□□ 1.2
FANCA-228ENST00000567943 ZNF474Q6S9Z5 364 aaPredicted RBP22.54■■□□□ 1.2
FANCA-228ENST00000567943 ATP6V1C2Q8NEY4 427 aa22.54■■□□□ 1.2
FANCA-228ENST00000567943 TMEM120AQ9BXJ8 343 aa22.54■■□□□ 1.2
FANCA-228ENST00000567943 PRRG4Q9BZD6 226 aa22.54■■□□□ 1.2
FANCA-228ENST00000567943 ZNF385DQ9H6B1 395 aa22.54■■□□□ 1.2
FANCA-228ENST00000567943 FGFR1OP2Q9NVK5 253 aa22.54■■□□□ 1.2
FANCA-228ENST00000567943 PAQR5Q9NXK6 330 aaPredicted RBP22.54■■□□□ 1.2
FANCA-228ENST00000567943 DNAJB12Q9NXW2 375 aaKnown RBP22.54■■□□□ 1.2
FANCA-228ENST00000567943 SLC25A37Q9NYZ2 338 aa22.54■■□□□ 1.2
FANCA-228ENST00000567943 ITGB1BP2Q9UKP3 347 aa22.54■■□□□ 1.2
FANCA-228ENST00000567943 F8P00451 2351 aa22.54■■□□□ 1.2
FANCA-228ENST00000567943 TFPTP0C1Z6 253 aa22.53■■□□□ 1.2
FANCA-228ENST00000567943 EPXP11678 715 aa22.53■■□□□ 1.2
FANCA-228ENST00000567943 NID1P14543 1247 aa22.53■■□□□ 1.2
FANCA-228ENST00000567943 RYKP34925 604 aa22.53■■□□□ 1.2
FANCA-228ENST00000567943 CPA2P48052 419 aa22.53■■□□□ 1.2
FANCA-228ENST00000567943 SIRPAP78324 504 aa22.53■■□□□ 1.2
FANCA-228ENST00000567943 GUCY1A3Q02108 690 aa22.53■■□□□ 1.2
FANCA-228ENST00000567943 PLAURQ03405 335 aa22.53■■□□□ 1.2
FANCA-228ENST00000567943 RGNQ15493 299 aa22.53■■□□□ 1.2
FANCA-228ENST00000567943 PDSS1Q5T2R2 415 aa22.53■■□□□ 1.2
FANCA-228ENST00000567943 MSRB3Q8IXL7 192 aa22.53■■□□□ 1.2
FANCA-228ENST00000567943 SLC38A5Q8WUX1 472 aa22.53■■□□□ 1.2
FANCA-228ENST00000567943 WDR60Q8WVS4 1066 aa22.53■■□□□ 1.2
FANCA-228ENST00000567943 ST8SIA1Q92185 356 aa22.53■■□□□ 1.2
FANCA-228ENST00000567943 CNOT9Q92600 299 aaKnown RBP22.53■■□□□ 1.2
FANCA-228ENST00000567943 OPN3Q9H1Y3 402 aaPredicted RBP22.53■■□□□ 1.2
FANCA-228ENST00000567943 RAD21L1Q9H4I0 556 aa22.53■■□□□ 1.2
FANCA-228ENST00000567943 THUMPD1Q9NXG2 353 aaKnown RBP22.53■■□□□ 1.2
FANCA-228ENST00000567943 CALML5Q9NZT1 146 aa22.53■■□□□ 1.2
FANCA-228ENST00000567943 ZNF469Q96JG9 3925 aaPredicted RBP22.53■■□□□ 1.2
FANCA-228ENST00000567943 A0A1W2PP18 115 aa22.52■■□□□ 1.2
FANCA-228ENST00000567943 ETV2O00321 342 aaPredicted RBP22.52■■□□□ 1.2
FANCA-228ENST00000567943 SMNDC1O75940 238 aaKnown RBP eCLIP22.52■■□□□ 1.2
FANCA-228ENST00000567943 SYNGR4O95473 234 aa22.52■■□□□ 1.2
FANCA-228ENST00000567943 DBIP07108 87 aaKnown RBP22.52■■□□□ 1.2
FANCA-228ENST00000567943 VIMP08670 466 aaKnown RBP22.52■■□□□ 1.2
FANCA-228ENST00000567943 NUDT7P0C024 238 aa22.52■■□□□ 1.2
FANCA-228ENST00000567943 TROVE2P10155 538 aaKnown RBP eCLIP22.52■■□□□ 1.2
FANCA-228ENST00000567943 FCGR2AP12318 317 aa22.52■■□□□ 1.2
FANCA-228ENST00000567943 IL7RP16871 459 aa22.52■■□□□ 1.2
FANCA-228ENST00000567943 RPS4Y1P22090 263 aaKnown RBP22.52■■□□□ 1.2
FANCA-228ENST00000567943 CRISP3P54108 245 aa22.52■■□□□ 1.2
FANCA-228ENST00000567943 SESN3P58005 492 aa22.52■■□□□ 1.2
FANCA-228ENST00000567943 FAM27E3Q08E93 113 aa22.52■■□□□ 1.2
FANCA-228ENST00000567943 SF3A3Q12874 501 aaKnown RBP eCLIP22.52■■□□□ 1.2
FANCA-228ENST00000567943 SELENBP1Q13228 472 aa22.52■■□□□ 1.2
FANCA-228ENST00000567943 GNA13Q14344 377 aa22.52■■□□□ 1.2
FANCA-228ENST00000567943 TMEM176BQ3YBM2 270 aaPredicted RBP22.52■■□□□ 1.2
FANCA-228ENST00000567943 PEX5LQ8IYB4 626 aa22.52■■□□□ 1.2
FANCA-228ENST00000567943 TMEM234Q8WY98 164 aa22.52■■□□□ 1.2
FANCA-228ENST00000567943 PMM1Q92871 262 aa22.52■■□□□ 1.2
FANCA-228ENST00000567943 OSTF1Q92882 214 aa22.52■■□□□ 1.2
FANCA-228ENST00000567943 TMEM19Q96HH6 336 aa22.52■■□□□ 1.2
FANCA-228ENST00000567943 POLDIP3Q9BY77 421 aaKnown RBP22.52■■□□□ 1.2
FANCA-228ENST00000567943 LIME1Q9H400 295 aa22.52■■□□□ 1.2
FANCA-228ENST00000567943 EXOSC3Q9NQT5 275 aaKnown RBP22.52■■□□□ 1.2
FANCA-228ENST00000567943 MCTS1Q9ULC4 181 aaKnown RBP22.52■■□□□ 1.2
FANCA-228ENST00000567943 TMEM247A6NEH6 219 aa22.51■■□□□ 1.19
FANCA-228ENST00000567943 GJE1A6NN92 205 aa22.51■■□□□ 1.19
FANCA-228ENST00000567943 DNAJA1P31689 397 aaKnown RBP22.51■■□□□ 1.19
FANCA-228ENST00000567943 CARD18P57730 90 aa22.51■■□□□ 1.19
FANCA-228ENST00000567943 MERTKQ12866 999 aa22.51■■□□□ 1.19
FANCA-228ENST00000567943 FADDQ13158 208 aa22.51■■□□□ 1.19
FANCA-228ENST00000567943 RPS26P11Q5JNZ5 115 aaPredicted RBP22.51■■□□□ 1.19
FANCA-228ENST00000567943 CMIPQ8IY22 773 aa22.51■■□□□ 1.19
FANCA-228ENST00000567943 ZNF563Q8TA94 476 aa22.51■■□□□ 1.19
FANCA-228ENST00000567943 CLEC4MQ9H2X3 399 aaPredicted RBP22.51■■□□□ 1.19
FANCA-228ENST00000567943 ACER3Q9NUN7 267 aa22.51■■□□□ 1.19
FANCA-228ENST00000567943 VAPAQ9P0L0 249 aa22.51■■□□□ 1.19
FANCA-228ENST00000567943 CPOXP36551 454 aa22.5■■□□□ 1.19
FANCA-228ENST00000567943 MRPL2Q5T653 305 aaKnown RBP22.5■■□□□ 1.19
FANCA-228ENST00000567943 METTL21CQ5VZV1 264 aa22.5■■□□□ 1.19
FANCA-228ENST00000567943 FAM214BQ7L5A3 538 aa22.5■■□□□ 1.19
FANCA-228ENST00000567943 ZNF610Q8N9Z0 462 aa22.5■■□□□ 1.19
FANCA-228ENST00000567943 OR52P1PQ8NH57 321 aa22.5■■□□□ 1.19
FANCA-228ENST00000567943 MAL2Q969L2 176 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms