RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 EPS8Q12929 822 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 CHAF1BQ13112 559 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 CLN3Q13286 438 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 NTRK2Q16620 822 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 ZNF791Q3KP31 576 aaPredicted RBP9.54□□□□□ -0.88
TCF4-236ENST00000567880 PRAMEF20Q5VT98 475 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 NKAIN4Q8IVV8 208 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 ZNF440Q8IYI8 595 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 AQP11Q8NBQ7 271 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 FAM71CQ8NEG0 241 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 NR4A3Q92570 626 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 TTC9Q92623 222 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 FER1L6-AS2Q96M78 137 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 GABARAPL1Q9H0R8 117 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 EVA1AQ9H8M9 152 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 ATP13A2Q9NQ11 1180 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 HPF1Q9NWY4 346 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 RPS6KB2Q9UBS0 482 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 ORC6Q9Y5N6 252 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 AP4B1Q9Y6B7 739 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 A0A1B0GWA3 101 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 ARGFXA6NJG6 315 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 FAAHO00519 579 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 DLGAP1O14490 977 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 FMO6PO60774 539 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 HPRP00739 348 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 THRBP10828 461 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 WT1P19544 449 aaPredicted RBP9.54□□□□□ -0.88
TCF4-236ENST00000567880 HSPA13P48723 471 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 IDH2P48735 452 aaKnown RBP9.54□□□□□ -0.88
TCF4-236ENST00000567880 LSM11P83369 360 aaKnown RBP eCLIP9.54□□□□□ -0.88
TCF4-236ENST00000567880 AIMP2Q13155 320 aaKnown RBP9.54□□□□□ -0.88
TCF4-236ENST00000567880 RAPSNQ13702 412 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 ACER2Q5QJU3 275 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 ZNF730Q6ZMV8 503 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 RRM2BQ7LG56 351 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 ALDH16A1Q8IZ83 802 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 OR4K5Q8NGD3 323 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 ZNF563Q8TA94 476 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 DUSP19Q8WTR2 217 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 TMEM255BQ8WV15 326 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 CYGBQ8WWM9 190 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 SLC38A4Q969I6 547 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 GTPBP3Q969Y2 492 aaKnown RBP9.54□□□□□ -0.88
TCF4-236ENST00000567880 RHOVQ96L33 236 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 CLUHP3Q96NS8 147 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 NIPSNAP1Q9BPW8 284 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 KLHDC3Q9BQ90 382 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 LAT2Q9GZY6 243 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 KRT84Q9NSB2 600 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 GALNT8Q9NY28 637 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 USE1Q9NZ43 259 aa9.54□□□□□ -0.88
TCF4-236ENST00000567880 ZFHX4Q86UP3 3567 aa9.53□□□□□ -0.88
TCF4-236ENST00000567880 A0A087WUU8 490 aa9.53□□□□□ -0.88
TCF4-236ENST00000567880 SH3PXD2BA1X283 911 aa9.53□□□□□ -0.88
TCF4-236ENST00000567880 A6NL46 340 aa9.53□□□□□ -0.88
TCF4-236ENST00000567880 H0YJX3 145 aa9.53□□□□□ -0.88
TCF4-236ENST00000567880 TP53I11O14683 189 aa9.53□□□□□ -0.88
TCF4-236ENST00000567880 GNB5O14775 395 aa9.53□□□□□ -0.88
TCF4-236ENST00000567880 F10P00742 488 aa9.53□□□□□ -0.88
TCF4-236ENST00000567880 UQCRBP14927 111 aa9.53□□□□□ -0.88
TCF4-236ENST00000567880 GIPRP48546 466 aa9.53□□□□□ -0.88
TCF4-236ENST00000567880 MEP1AQ16819 746 aa9.53□□□□□ -0.88
TCF4-236ENST00000567880 ALG10BQ5I7T1 473 aa9.53□□□□□ -0.88
TCF4-236ENST00000567880 ZNF468Q5VIY5 522 aaPredicted RBP9.53□□□□□ -0.88
TCF4-236ENST00000567880 KDM4DQ6B0I6 523 aa9.53□□□□□ -0.88
TCF4-236ENST00000567880 H3F3CQ6NXT2 135 aa9.53□□□□□ -0.88
TCF4-236ENST00000567880 FAHD1Q6P587 224 aa9.53□□□□□ -0.88
TCF4-236ENST00000567880 ZNF613Q6PF04 617 aa9.53□□□□□ -0.88
TCF4-236ENST00000567880 MEX3DQ86XN8 651 aaKnown RBP9.53□□□□□ -0.88
TCF4-236ENST00000567880 OR8H2Q8N162 312 aa9.53□□□□□ -0.88
TCF4-236ENST00000567880 BEST3Q8N1M1 668 aa9.53□□□□□ -0.88
TCF4-236ENST00000567880 PSMF1Q92530 271 aa9.53□□□□□ -0.88
TCF4-236ENST00000567880 SLC35B4Q969S0 331 aa9.53□□□□□ -0.88
TCF4-236ENST00000567880 TRIM2Q9C040 744 aa9.53□□□□□ -0.88
TCF4-236ENST00000567880 TOR3AQ9H497 397 aa9.53□□□□□ -0.88
TCF4-236ENST00000567880 ZNF556Q9HAH1 456 aa9.53□□□□□ -0.88
TCF4-236ENST00000567880 EXOSC3Q9NQT5 275 aaKnown RBP9.53□□□□□ -0.88
TCF4-236ENST00000567880 TMEFF2Q9UIK5 374 aaPredicted RBP9.53□□□□□ -0.88
TCF4-236ENST00000567880 CHCHD2Q9Y6H1 151 aaPredicted RBP9.53□□□□□ -0.88
TCF4-236ENST00000567880 MED12Q93074 2177 aa9.53□□□□□ -0.88
TCF4-236ENST00000567880 A0A0B4J2E0 115 aa9.52□□□□□ -0.88
TCF4-236ENST00000567880 A0A1B0GX12 115 aa9.52□□□□□ -0.88
TCF4-236ENST00000567880 KPNA4O00629 521 aaPredicted RBP9.52□□□□□ -0.88
TCF4-236ENST00000567880 EIF4E2O60573 245 aaKnown RBP9.52□□□□□ -0.88
TCF4-236ENST00000567880 GASTP01350 101 aa9.52□□□□□ -0.88
TCF4-236ENST00000567880 ANXA8P13928 327 aa9.52□□□□□ -0.88
TCF4-236ENST00000567880 ENDOUP21128 410 aaKnown RBP9.52□□□□□ -0.88
TCF4-236ENST00000567880 CASP3P42574 277 aa9.52□□□□□ -0.88
TCF4-236ENST00000567880 RAD23AP54725 363 aa9.52□□□□□ -0.88
TCF4-236ENST00000567880 C17orf67Q0P5P2 114 aa9.52□□□□□ -0.88
TCF4-236ENST00000567880 MERTKQ12866 999 aa9.52□□□□□ -0.88
TCF4-236ENST00000567880 KCNAB2Q13303 367 aa9.52□□□□□ -0.88
TCF4-236ENST00000567880 GK3PQ14409 553 aa9.52□□□□□ -0.88
TCF4-236ENST00000567880 COL28A1Q2UY09 1125 aa9.52□□□□□ -0.88
TCF4-236ENST00000567880 NHSL2Q5HYW2 709 aa9.52□□□□□ -0.88
TCF4-236ENST00000567880 JMJD6Q6NYC1 403 aaPredicted RBP9.52□□□□□ -0.88
TCF4-236ENST00000567880 WDR88Q6ZMY6 472 aa9.52□□□□□ -0.88
TCF4-236ENST00000567880 MISPQ8IVT2 679 aa9.52□□□□□ -0.88
TCF4-236ENST00000567880 CYP4Z2PQ8N1L4 340 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms