RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 RELTQ969Z4 430 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 VKORC1Q9BQB6 163 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 SERINC1Q9NRX5 453 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 RLIMQ9NVW2 624 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 PAQR5Q9NXK6 330 aaPredicted RBP11□□□□□ -0.65
SF3B3-208ENST00000567250 TNFRSF10DQ9UBN6 386 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 FLNCQ14315 2725 aa11□□□□□ -0.65
SF3B3-208ENST00000567250 HELZ2Q9BYK8 2649 aaKnown RBP10.99□□□□□ -0.65
SF3B3-208ENST00000567250 POLEQ07864 2286 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 B2RBV5 119 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 SEC14L5O43304 696 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 BCAS1O75363 584 aaPredicted RBP10.99□□□□□ -0.65
SF3B3-208ENST00000567250 AGFG2O95081 481 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 HSD17B1P14061 328 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 FKBP2P26885 142 aaKnown RBP10.99□□□□□ -0.65
SF3B3-208ENST00000567250 APOBEC1P41238 236 aaKnown RBP10.99□□□□□ -0.65
SF3B3-208ENST00000567250 SLC1A3P43003 542 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 IDH2P48735 452 aaKnown RBP10.99□□□□□ -0.65
SF3B3-208ENST00000567250 MAP2K6P52564 334 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 DLX5P56178 289 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 CLDN18P56856 261 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 SESN3P58005 492 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 SLC25A3Q00325 362 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 PLAURQ03405 335 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 DMTNQ08495 405 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 MERTKQ12866 999 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 DNAL1Q4LDG9 190 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 DCST1Q5T197 706 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 C1orf185Q5T7R7 199 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 WBP2NLQ6ICG8 309 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 TMEM211Q6ICI0 200 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 ESPNLQ6ZVH7 1005 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 DOLPP1Q86YN1 238 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 ULK2Q8IYT8 1036 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 UBQLNLQ8IYU4 475 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 CLIP4Q8N3C7 705 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 SMYD1Q8NB12 490 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 OR5M1Q8NGP8 315 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 FIG4Q92562 907 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 WDYHV1Q96HA8 205 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 C1orf21Q9H246 121 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 ACER3Q9NUN7 267 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 ADPRHL2Q9NX46 363 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 ALKBH4Q9NXW9 302 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 RPS6KB2Q9UBS0 482 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 MAGEL2Q9UJ55 1249 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 SLC9A8Q9Y2E8 581 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 MEMO1Q9Y316 297 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 ZNF337Q9Y3M9 751 aa10.99□□□□□ -0.65
SF3B3-208ENST00000567250 HIVEP3Q5T1R4 2406 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 SHISA8B8ZZ34 492 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 CXCR6O00574 342 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 AP3D1O14617 1153 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 ZNHIT1O43257 154 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 LRRTM2O43300 516 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 UBOX5O94941 541 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 NTN1O95631 604 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 GKN3PP0CG01 181 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 FCGR2AP12318 317 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 PSMA4P25789 261 aaKnown RBP10.98□□□□□ -0.65
SF3B3-208ENST00000567250 HTR1EP28566 365 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 SLC7A1P30825 629 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 KDELR2P33947 212 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 KCNJ5P48544 419 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 RASSF2P50749 326 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 POLR2HP52434 150 aaKnown RBP10.98□□□□□ -0.65
SF3B3-208ENST00000567250 SRYQ05066 204 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 BNIP2Q12982 314 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 TOMM34Q15785 309 aaPredicted RBP10.98□□□□□ -0.65
SF3B3-208ENST00000567250 ACSF3Q4G176 576 aaPredicted RBP10.98□□□□□ -0.65
SF3B3-208ENST00000567250 EMC4Q5J8M3 183 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 RPTNQ6XPR3 784 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 PLEKHM3Q6ZWE6 761 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 LACC1Q8IV20 430 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 LILRA2Q8N149 483 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 CADM2Q8N3J6 435 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 FAM26EQ8N5C1 309 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 RBM15BQ8NDT2 890 aaKnown RBP10.98□□□□□ -0.65
SF3B3-208ENST00000567250 POC1BQ8TC44 478 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 ZPLD1Q8TCW7 415 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 FAM162AQ96A26 154 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 TAMM41Q96BW9 452 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 KLHL15Q96M94 604 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 ZNF559Q9BR84 538 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 TRIM2Q9C040 744 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 TIGARQ9NQ88 270 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 SELENONQ9NZV5 590 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 CHRNA9Q9UGM1 479 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 RPS6KA6Q9UK32 745 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 PRPF19Q9UMS4 504 aaKnown RBP10.98□□□□□ -0.65
SF3B3-208ENST00000567250 USP22Q9UPT9 525 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 CHST2Q9Y4C5 530 aa10.98□□□□□ -0.65
SF3B3-208ENST00000567250 EIF1AYO14602 144 aaKnown RBP10.97□□□□□ -0.65
SF3B3-208ENST00000567250 TPST1O60507 370 aa10.97□□□□□ -0.65
SF3B3-208ENST00000567250 FMO6PO60774 539 aa10.97□□□□□ -0.65
SF3B3-208ENST00000567250 GCM2O75603 506 aaPredicted RBP10.97□□□□□ -0.65
SF3B3-208ENST00000567250 LGI1O95970 557 aa10.97□□□□□ -0.65
SF3B3-208ENST00000567250 FESP07332 822 aa10.97□□□□□ -0.65
SF3B3-208ENST00000567250 GGT1P19440 569 aa10.97□□□□□ -0.65
SF3B3-208ENST00000567250 CD247P20963 164 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms