RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 LMX1BO60663 402 aa13.62□□□□□ -0.23
PALB2-205ENST00000567003 TBX19O60806 448 aa13.62□□□□□ -0.23
PALB2-205ENST00000567003 PROCP04070 461 aa13.62□□□□□ -0.23
PALB2-205ENST00000567003 DHRS4L1P0CG22 281 aa13.62□□□□□ -0.23
PALB2-205ENST00000567003 UROSP10746 265 aa13.62□□□□□ -0.23
PALB2-205ENST00000567003 SRD5A1P18405 259 aa13.62□□□□□ -0.23
PALB2-205ENST00000567003 CD40P25942 277 aa13.62□□□□□ -0.23
PALB2-205ENST00000567003 SUMO3P55854 103 aaPredicted RBP13.62□□□□□ -0.23
PALB2-205ENST00000567003 RFTN2Q52LD8 501 aaPredicted RBP13.62□□□□□ -0.23
PALB2-205ENST00000567003 ARL13AQ5H913 290 aaPredicted RBP13.62□□□□□ -0.23
PALB2-205ENST00000567003 CFAP157Q5JU67 520 aa13.62□□□□□ -0.23
PALB2-205ENST00000567003 ZCCHC12Q6PEW1 402 aa13.62□□□□□ -0.23
PALB2-205ENST00000567003 TMEM108Q6UXF1 575 aa13.62□□□□□ -0.23
PALB2-205ENST00000567003 OLIG3Q7RTU3 272 aa13.62□□□□□ -0.23
PALB2-205ENST00000567003 LCA5Q86VQ0 697 aa13.62□□□□□ -0.23
PALB2-205ENST00000567003 UBE2J2Q8N2K1 259 aa13.62□□□□□ -0.23
PALB2-205ENST00000567003 MZB1Q8WU39 189 aa13.62□□□□□ -0.23
PALB2-205ENST00000567003 STACQ99469 402 aa13.62□□□□□ -0.23
PALB2-205ENST00000567003 IQCGQ9H095 443 aaKnown RBP13.62□□□□□ -0.23
PALB2-205ENST00000567003 PIGUQ9H490 435 aa13.62□□□□□ -0.23
PALB2-205ENST00000567003 TUBB1Q9H4B7 451 aa13.62□□□□□ -0.23
PALB2-205ENST00000567003 DUSP22Q9NRW4 184 aa13.62□□□□□ -0.23
PALB2-205ENST00000567003 GIMAP2Q9UG22 337 aa13.62□□□□□ -0.23
PALB2-205ENST00000567003 TBK1Q9UHD2 729 aa13.62□□□□□ -0.23
PALB2-205ENST00000567003 CENPVL1A0A0U1RR11 272 aa13.61□□□□□ -0.23
PALB2-205ENST00000567003 A0A1W2PPM1 405 aa13.61□□□□□ -0.23
PALB2-205ENST00000567003 CIB4A0PJX0 185 aa13.61□□□□□ -0.23
PALB2-205ENST00000567003 CCT8L1PA6NM43 557 aa13.61□□□□□ -0.23
PALB2-205ENST00000567003 ZNF724A8MTY0 619 aa13.61□□□□□ -0.23
PALB2-205ENST00000567003 NPIPB9F8W1W9 429 aa13.61□□□□□ -0.23
PALB2-205ENST00000567003 H3BNH8 94 aa13.61□□□□□ -0.23
PALB2-205ENST00000567003 SLC28A1O00337 649 aa13.61□□□□□ -0.23
PALB2-205ENST00000567003 CYP7B1O75881 506 aa13.61□□□□□ -0.23
PALB2-205ENST00000567003 LINC00032P0C843 101 aa13.61□□□□□ -0.23
PALB2-205ENST00000567003 USF1P22415 310 aaPredicted RBP13.61□□□□□ -0.23
PALB2-205ENST00000567003 NTF4P34130 210 aa13.61□□□□□ -0.23
PALB2-205ENST00000567003 ATP12AP54707 1039 aa13.61□□□□□ -0.23
PALB2-205ENST00000567003 TP53BP2Q13625 1128 aa13.61□□□□□ -0.23
PALB2-205ENST00000567003 GGTLC2Q14390 218 aa13.61□□□□□ -0.23
PALB2-205ENST00000567003 GALNTL6Q49A17 601 aa13.61□□□□□ -0.23
PALB2-205ENST00000567003 TIGD2Q4W5G0 525 aa13.61□□□□□ -0.23
PALB2-205ENST00000567003 SLC25A53Q5H9E4 307 aa13.61□□□□□ -0.23
PALB2-205ENST00000567003 PDZK1Q5T2W1 519 aa13.61□□□□□ -0.23
PALB2-205ENST00000567003 LIPMQ5VYY2 423 aa13.61□□□□□ -0.23
PALB2-205ENST00000567003 P2RY8Q86VZ1 359 aa13.61□□□□□ -0.23
PALB2-205ENST00000567003 ZNF527Q8NB42 609 aa13.61□□□□□ -0.23
PALB2-205ENST00000567003 OR7A2PQ8NGA2 310 aa13.61□□□□□ -0.23
PALB2-205ENST00000567003 OR5W2Q8NH69 310 aa13.61□□□□□ -0.23
PALB2-205ENST00000567003 RADILQ96JH8 1075 aa13.61□□□□□ -0.23
PALB2-205ENST00000567003 TSPYL1Q9H0U9 437 aa13.61□□□□□ -0.23
PALB2-205ENST00000567003 DTNAQ9Y4J8 743 aa13.61□□□□□ -0.23
PALB2-205ENST00000567003 ATP23Q9Y6H3 246 aa13.61□□□□□ -0.23
PALB2-205ENST00000567003 H7C417 338 aa13.6□□□□□ -0.23
PALB2-205ENST00000567003 HSPA4LO95757 839 aa13.6□□□□□ -0.23
PALB2-205ENST00000567003 ABHD2P08910 425 aa13.6□□□□□ -0.23
PALB2-205ENST00000567003 LAMP1P11279 417 aa13.6□□□□□ -0.23
PALB2-205ENST00000567003 UBL4AP11441 157 aa13.6□□□□□ -0.23
PALB2-205ENST00000567003 DIO1P49895 249 aa13.6□□□□□ -0.23
PALB2-205ENST00000567003 LSM11P83369 360 aaKnown RBP eCLIP13.6□□□□□ -0.23
PALB2-205ENST00000567003 FAM120AOSQ5T036 256 aa13.6□□□□□ -0.23
PALB2-205ENST00000567003 C9orf135Q5VTT2 229 aa13.6□□□□□ -0.23
PALB2-205ENST00000567003 FBXW9Q5XUX1 488 aa13.6□□□□□ -0.23
PALB2-205ENST00000567003 ABLIM2Q6H8Q1 611 aa13.6□□□□□ -0.23
PALB2-205ENST00000567003 C3orf33Q6P1S2 294 aa13.6□□□□□ -0.23
PALB2-205ENST00000567003 KLHL17Q6TDP4 642 aa13.6□□□□□ -0.23
PALB2-205ENST00000567003 OR5D16Q8NGK9 328 aa13.6□□□□□ -0.23
PALB2-205ENST00000567003 ACMSDQ8TDX5 336 aa13.6□□□□□ -0.23
PALB2-205ENST00000567003 ADAMTS15Q8TE58 950 aa13.6□□□□□ -0.23
PALB2-205ENST00000567003 C3orf49Q96BT1 292 aa13.6□□□□□ -0.23
PALB2-205ENST00000567003 CCDC126Q96EE4 140 aa13.6□□□□□ -0.23
PALB2-205ENST00000567003 THUMPD3Q9BV44 507 aaKnown RBP13.6□□□□□ -0.23
PALB2-205ENST00000567003 ACTRT3Q9BYD9 372 aa13.6□□□□□ -0.23
PALB2-205ENST00000567003 HOXD1Q9GZZ0 328 aa13.6□□□□□ -0.23
PALB2-205ENST00000567003 GPATCH2Q9NW75 528 aa13.6□□□□□ -0.23
PALB2-205ENST00000567003 MGAT4BQ9UQ53 548 aa13.6□□□□□ -0.23
PALB2-205ENST00000567003 ZNF716A6NP11 495 aa13.59□□□□□ -0.23
PALB2-205ENST00000567003 TMEM233B4DJY2 109 aa13.59□□□□□ -0.23
PALB2-205ENST00000567003 ETV2O00321 342 aaPredicted RBP13.59□□□□□ -0.23
PALB2-205ENST00000567003 AZIN1O14977 448 aa13.59□□□□□ -0.23
PALB2-205ENST00000567003 SCAMP2O15127 329 aaKnown RBP13.59□□□□□ -0.23
PALB2-205ENST00000567003 ZNF264O43296 627 aa13.59□□□□□ -0.23
PALB2-205ENST00000567003 RIPK2O43353 540 aa13.59□□□□□ -0.23
PALB2-205ENST00000567003 C6orf47O95873 294 aa13.59□□□□□ -0.23
PALB2-205ENST00000567003 ITGA5P08648 1049 aa13.59□□□□□ -0.23
PALB2-205ENST00000567003 BCKDHAP12694 445 aa13.59□□□□□ -0.23
PALB2-205ENST00000567003 PTAFRP25105 342 aa13.59□□□□□ -0.23
PALB2-205ENST00000567003 EFNA4P52798 201 aa13.59□□□□□ -0.23
PALB2-205ENST00000567003 SESN3P58005 492 aa13.59□□□□□ -0.23
PALB2-205ENST00000567003 RPS26P62854 115 aaKnown RBP13.59□□□□□ -0.23
PALB2-205ENST00000567003 SLC25A3Q00325 362 aa13.59□□□□□ -0.23
PALB2-205ENST00000567003 MERTKQ12866 999 aa13.59□□□□□ -0.23
PALB2-205ENST00000567003 CBFBQ13951 182 aa13.59□□□□□ -0.23
PALB2-205ENST00000567003 SPDYE7PQ495Y7 208 aa13.59□□□□□ -0.23
PALB2-205ENST00000567003 TOR1AIP2Q8NFQ8 470 aa13.59□□□□□ -0.23
PALB2-205ENST00000567003 OR52E4Q8NGH9 312 aa13.59□□□□□ -0.23
PALB2-205ENST00000567003 OR5AK3PQ8NH89 298 aa13.59□□□□□ -0.23
PALB2-205ENST00000567003 PROX1Q92786 737 aa13.59□□□□□ -0.23
PALB2-205ENST00000567003 APH1AQ96BI3 265 aa13.59□□□□□ -0.23
PALB2-205ENST00000567003 METTL2AQ96IZ6 378 aaKnown RBP13.59□□□□□ -0.23
PALB2-205ENST00000567003 OR7D2Q96RA2 312 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms