RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 ING2Q9H160 280 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 DPAGT1Q9H3H5 408 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 EHD1Q9H4M9 534 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 SP140LQ9H930 580 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 PARVBQ9HBI1 364 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 ASCL3Q9NQ33 180 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 SLC52A3Q9NQ40 469 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 ABCC13Q9NSE7 274 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 PAK1IP1Q9NWT1 392 aaPredicted RBP3.81□□□□□ -1.8
LINC00561-201ENST00000565815 CMTM6Q9NX76 183 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 ZNF224Q9NZL3 707 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 MARCH4Q9P2E8 410 aaPredicted RBP3.81□□□□□ -1.8
LINC00561-201ENST00000565815 DNAJB9Q9UBS3 223 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 ENPP5Q9UJA9 477 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 C3orf18Q9UK00 162 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 UGT2A1Q9Y4X1 527 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 ORC6Q9Y5N6 252 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 FAM92AA1XBS5 289 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 HNRNPCL2B2RXH8 293 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 TLR4O00206 839 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 CRCPO75575 148 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 SLC22A3O75751 556 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 RPS17P08708 135 aaKnown RBP3.81□□□□□ -1.8
LINC00561-201ENST00000565815 SRCP12931 536 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 CD1DP15813 335 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 CRHBPP24387 322 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 EEF1DP29692 281 aaKnown RBP3.81□□□□□ -1.8
LINC00561-201ENST00000565815 TMED10P49755 219 aaKnown RBP3.81□□□□□ -1.8
LINC00561-201ENST00000565815 BMXP51813 675 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 TUBA1BP68363 451 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 LIPEQ05469 1076 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 RIPPLY1Q0D2K3 151 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 POU6F1Q14863 301 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 TYSND1Q2T9J0 566 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 PHLDA2Q53GA4 152 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 LBHQ53QV2 105 aaPredicted RBP3.81□□□□□ -1.8
LINC00561-201ENST00000565815 SYPL2Q5VXT5 272 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 MSANTD1Q6ZTZ1 278 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 PAQR9Q6ZVX9 377 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 ASB18Q6ZVZ8 466 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 CREB3L2Q70SY1 520 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 TUBA1AQ71U36 451 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 HIPK1Q86Z02 1210 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 UMODL1-AS1Q8N2C9 162 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 EID2Q8N6I1 236 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 IPMKQ8NFU5 416 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 OR56A4Q8NGH8 313 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 NAT6Q93015 286 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 FBXO32Q969P5 355 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 ZNF599Q96NL3 588 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 TRIB3Q96RU7 358 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 GABARAPL1Q9H0R8 117 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 OSGEPL1Q9H4B0 414 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 RMND5AQ9H871 391 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 CHMP1AQ9HD42 196 aaPredicted RBP3.81□□□□□ -1.8
LINC00561-201ENST00000565815 ELOVL2Q9NXB9 296 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 NLGN3Q9NZ94 848 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 EXO1Q9UQ84 846 aaKnown RBP3.81□□□□□ -1.8
LINC00561-201ENST00000565815 PDE10AQ9Y233 779 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 COL6A6A6NMZ7 2263 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 TEX13DA0A0J9YY54 714 aaPredicted RBP3.8□□□□□ -1.8
LINC00561-201ENST00000565815 A0A1W2PPW3 197 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 OR5K3A6NET4 321 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 C10orf142B7Z368 130 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 HHLA1C9JL84 531 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 FAM72CH0Y354 149 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 PLOD2O00469 737 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 HS3ST1O14792 307 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 INPP4BO15327 924 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 SMAD6O43541 496 aaKnown RBP3.8□□□□□ -1.8
LINC00561-201ENST00000565815 DPM1O60762 260 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 UGT2B11O75310 529 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 CSO75390 466 aaKnown RBP3.8□□□□□ -1.8
LINC00561-201ENST00000565815 SUPT3HO75486 399 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 RECQL5O94762 991 aaPredicted RBP3.8□□□□□ -1.8
LINC00561-201ENST00000565815 CDK14O94921 469 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 GABARAPO95166 117 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 LIPFP07098 398 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 LMO2P25791 158 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 ATP5C1P36542 298 aaKnown RBP3.8□□□□□ -1.8
LINC00561-201ENST00000565815 POLR2JP52435 117 aaKnown RBP3.8□□□□□ -1.8
LINC00561-201ENST00000565815 YBEYP58557 167 aaPredicted RBP3.8□□□□□ -1.8
LINC00561-201ENST00000565815 DSCR9P59020 149 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 RAD51Q06609 339 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 FADDQ13158 208 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 LINC00303Q3SY05 128 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 FAM72AQ5TYM5 149 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 FAM72DQ6L9T8 149 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 UGT3A1Q6NUS8 523 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 NEK5Q6P3R8 708 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 ZNF517Q6ZMY9 492 aaPredicted RBP3.8□□□□□ -1.8
LINC00561-201ENST00000565815 TMEM26Q6ZUK4 368 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 FAM72BQ86X60 149 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 ZFAND4Q86XD8 727 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 LGI2Q8N0V4 545 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 EID3Q8N140 333 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 RBMXL3Q8N7X1 1067 aaKnown RBP3.8□□□□□ -1.8
LINC00561-201ENST00000565815 OR5K1Q8NHB7 308 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 ELP5Q8TE02 316 aa3.8□□□□□ -1.8
LINC00561-201ENST00000565815 ISG20Q96AZ6 181 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms