RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 FAM171A2A8MVW0 826 aa19.01■□□□□ 0.63
MAP1LC3B-206ENST00000564844 HNRNPCL3B7ZW38 293 aa19.01■□□□□ 0.63
MAP1LC3B-206ENST00000564844 IMPA2O14732 288 aa19.01■□□□□ 0.63
MAP1LC3B-206ENST00000564844 CASC3O15234 703 aaKnown RBP19.01■□□□□ 0.63
MAP1LC3B-206ENST00000564844 UBL3O95164 117 aa19.01■□□□□ 0.63
MAP1LC3B-206ENST00000564844 HNRNPCL4P0DMR1 293 aa19.01■□□□□ 0.63
MAP1LC3B-206ENST00000564844 FPR3P25089 353 aa19.01■□□□□ 0.63
MAP1LC3B-206ENST00000564844 DCTDP32321 178 aa19.01■□□□□ 0.63
MAP1LC3B-206ENST00000564844 STAT5AP42229 794 aa19.01■□□□□ 0.63
MAP1LC3B-206ENST00000564844 SNRPNP63162 240 aaKnown RBP19.01■□□□□ 0.63
MAP1LC3B-206ENST00000564844 OR52L1Q8NGH7 329 aa19.01■□□□□ 0.63
MAP1LC3B-206ENST00000564844 SMPDL3BQ92485 455 aa19.01■□□□□ 0.63
MAP1LC3B-206ENST00000564844 HGDQ93099 445 aa19.01■□□□□ 0.63
MAP1LC3B-206ENST00000564844 HRASLSQ9HDD0 168 aa19.01■□□□□ 0.63
MAP1LC3B-206ENST00000564844 ENTPD4Q9Y227 616 aa19.01■□□□□ 0.63
MAP1LC3B-206ENST00000564844 F5P12259 2224 aa19■□□□□ 0.63
MAP1LC3B-206ENST00000564844 ANXA2P2A6NMY6 339 aa19■□□□□ 0.63
MAP1LC3B-206ENST00000564844 TGM5O43548 720 aa19■□□□□ 0.63
MAP1LC3B-206ENST00000564844 SPDEFO95238 335 aa19■□□□□ 0.63
MAP1LC3B-206ENST00000564844 PPP1R3DO95685 299 aa19■□□□□ 0.63
MAP1LC3B-206ENST00000564844 C8AP07357 584 aa19■□□□□ 0.63
MAP1LC3B-206ENST00000564844 EPXP11678 715 aa19■□□□□ 0.63
MAP1LC3B-206ENST00000564844 GNA13Q14344 377 aa19■□□□□ 0.63
MAP1LC3B-206ENST00000564844 SLC9A5Q14940 896 aa19■□□□□ 0.63
MAP1LC3B-206ENST00000564844 FCRLAQ7L513 359 aa19■□□□□ 0.63
MAP1LC3B-206ENST00000564844 LINC01555Q8NAE3 123 aa19■□□□□ 0.63
MAP1LC3B-206ENST00000564844 NUS1Q96E22 293 aa19■□□□□ 0.63
MAP1LC3B-206ENST00000564844 SGTBQ96EQ0 304 aa19■□□□□ 0.63
MAP1LC3B-206ENST00000564844 DTD2Q96FN9 168 aa19■□□□□ 0.63
MAP1LC3B-206ENST00000564844 LRIG1Q96JA1 1093 aa19■□□□□ 0.63
MAP1LC3B-206ENST00000564844 MAN2B1O00754 1011 aa19■□□□□ 0.63
MAP1LC3B-206ENST00000564844 C6P13671 934 aa19■□□□□ 0.63
MAP1LC3B-206ENST00000564844 GXYLT1Q4G148 440 aa19■□□□□ 0.63
MAP1LC3B-206ENST00000564844 LCTLQ6UWM7 567 aa19■□□□□ 0.63
MAP1LC3B-206ENST00000564844 KLHDC8AQ8IYD2 350 aa19■□□□□ 0.63
MAP1LC3B-206ENST00000564844 IRF7Q92985 503 aa19■□□□□ 0.63
MAP1LC3B-206ENST00000564844 OTUB2Q96DC9 234 aa19■□□□□ 0.63
MAP1LC3B-206ENST00000564844 SLC35A4Q96G79 324 aa19■□□□□ 0.63
MAP1LC3B-206ENST00000564844 SARGQ9BW04 601 aa19■□□□□ 0.63
MAP1LC3B-206ENST00000564844 FBXO34Q9NWN3 711 aa19■□□□□ 0.63
MAP1LC3B-206ENST00000564844 SIDT1Q9NXL6 827 aaKnown RBP19■□□□□ 0.63
MAP1LC3B-206ENST00000564844 NTMQ9P121 344 aa19■□□□□ 0.63
MAP1LC3B-206ENST00000564844 FLRT2O43155 660 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 AIFM1O95831 613 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 CCR9P51686 369 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 RPS15P62841 145 aaKnown RBP18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 SFTPA1Q8IWL2 248 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 ZNF707Q96C28 371 aaPredicted RBP18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 CAMK1GQ96NX5 476 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 FERD3LQ96RJ6 166 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 GAL3ST1Q99999 423 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 REG4Q9BYZ8 158 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 SAV1Q9H4B6 383 aaPredicted RBP18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 NOX3Q9HBY0 568 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 ACSS1Q9NUB1 689 aaPredicted RBP18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 POT1Q9NUX5 634 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 BAIAP2Q9UQB8 552 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 FKBP7Q9Y680 259 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 TRIOO75962 3097 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 MTCL1Q9Y4B5 1905 aaKnown RBP18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 HMGN1P05114 100 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 HOXD10P28358 340 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 ZNF85Q03923 595 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 KLF9Q13886 244 aaPredicted RBP18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 ODF4Q2M2E3 257 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 FAM111BQ6SJ93 734 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 MBOAT2Q6ZWT7 520 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 DPPA4Q7L190 304 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 ACOT4Q8N9L9 421 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 CD180Q99467 661 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 LYARQ9NX58 379 aaKnown RBP18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 SAGE1Q9NXZ1 904 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 UNC119BA6NIH7 251 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 RLN1P04808 185 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 PCCBP05166 539 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 PSMB1P20618 241 aaKnown RBP18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 IL32P24001 234 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 MMP15P51511 669 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 DEFA5Q01523 94 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 TEAD2Q15562 447 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 C2orf68Q2NKX9 166 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 AMZ2Q86W34 360 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 LSM14AQ8ND56 463 aaKnown RBP18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 OR5M1Q8NGP8 315 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 SETD7Q8WTS6 366 aaKnown RBP18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 PGLYRP3Q96LB9 341 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 OR52A5Q9H2C5 316 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 SYNPO2LQ9H987 977 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 GNG8Q9UK08 70 aa18.99■□□□□ 0.63
MAP1LC3B-206ENST00000564844 DEFB103AP81534 67 aa18.98■□□□□ 0.63
MAP1LC3B-206ENST00000564844 FOXK2Q01167 660 aa18.98■□□□□ 0.63
MAP1LC3B-206ENST00000564844 LINC00303Q3SY05 128 aa18.98■□□□□ 0.63
MAP1LC3B-206ENST00000564844 ZC3H14Q6PJT7 736 aaKnown RBP18.98■□□□□ 0.63
MAP1LC3B-206ENST00000564844 KISS1RQ969F8 398 aaPredicted RBP18.98■□□□□ 0.63
MAP1LC3B-206ENST00000564844 PCDHGA5Q9Y5G8 931 aa18.98■□□□□ 0.63
MAP1LC3B-206ENST00000564844 DENND4CQ5VZ89 1909 aa18.98■□□□□ 0.63
MAP1LC3B-206ENST00000564844 LRIT2A6NDA9 550 aa18.98■□□□□ 0.63
MAP1LC3B-206ENST00000564844 PDCD5O14737 125 aa18.98■□□□□ 0.63
MAP1LC3B-206ENST00000564844 INHAP05111 366 aa18.98■□□□□ 0.63
MAP1LC3B-206ENST00000564844 NMBP08949 121 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms