RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 KLHDC3Q9BQ90 382 aa14.42□□□□□ -0.1
RAB40C-208ENST00000564703 GPATCH1Q9BRR8 931 aaKnown RBP14.42□□□□□ -0.1
RAB40C-208ENST00000564703 PINK1Q9BXM7 581 aa14.42□□□□□ -0.1
RAB40C-208ENST00000564703 EVA1AQ9H8M9 152 aa14.42□□□□□ -0.1
RAB40C-208ENST00000564703 ARL8BQ9NVJ2 186 aa14.42□□□□□ -0.1
RAB40C-208ENST00000564703 PAQR5Q9NXK6 330 aaPredicted RBP14.42□□□□□ -0.1
RAB40C-208ENST00000564703 ADA2Q9NZK5 511 aa14.42□□□□□ -0.1
RAB40C-208ENST00000564703 SPIN1Q9Y657 262 aaPredicted RBP14.42□□□□□ -0.1
RAB40C-208ENST00000564703 ELOVL7A1L3X0 281 aa14.41□□□□□ -0.1
RAB40C-208ENST00000564703 CCT8L1PA6NM43 557 aa14.41□□□□□ -0.1
RAB40C-208ENST00000564703 FAM220BPB1ANY3 271 aa14.41□□□□□ -0.1
RAB40C-208ENST00000564703 FAAHO00519 579 aa14.41□□□□□ -0.1
RAB40C-208ENST00000564703 EIF1AYO14602 144 aaKnown RBP14.41□□□□□ -0.1
RAB40C-208ENST00000564703 BCAS1O75363 584 aaPredicted RBP14.41□□□□□ -0.1
RAB40C-208ENST00000564703 MFN2O95140 757 aa14.41□□□□□ -0.1
RAB40C-208ENST00000564703 OPN1LWP04000 364 aa14.41□□□□□ -0.1
RAB40C-208ENST00000564703 GKN3PP0CG01 181 aa14.41□□□□□ -0.1
RAB40C-208ENST00000564703 FKBP2P26885 142 aaKnown RBP14.41□□□□□ -0.1
RAB40C-208ENST00000564703 SLC7A2P52569 658 aa14.41□□□□□ -0.1
RAB40C-208ENST00000564703 CLDN15P56746 228 aa14.41□□□□□ -0.1
RAB40C-208ENST00000564703 LIPEQ05469 1076 aa14.41□□□□□ -0.1
RAB40C-208ENST00000564703 EPS8Q12929 822 aa14.41□□□□□ -0.1
RAB40C-208ENST00000564703 TMEM176BQ3YBM2 270 aaPredicted RBP14.41□□□□□ -0.1
RAB40C-208ENST00000564703 ACSF3Q4G176 576 aaPredicted RBP14.41□□□□□ -0.1
RAB40C-208ENST00000564703 NSUN5P2Q63ZY6 315 aa14.41□□□□□ -0.1
RAB40C-208ENST00000564703 POMZP3Q6PJE2 187 aa14.41□□□□□ -0.1
RAB40C-208ENST00000564703 DHRS4L2Q6PKH6 230 aa14.41□□□□□ -0.1
RAB40C-208ENST00000564703 ESPNLQ6ZVH7 1005 aa14.41□□□□□ -0.1
RAB40C-208ENST00000564703 GRINAQ7Z429 371 aa14.41□□□□□ -0.1
RAB40C-208ENST00000564703 P4HA3Q7Z4N8 544 aa14.41□□□□□ -0.1
RAB40C-208ENST00000564703 MICU2Q8IYU8 434 aa14.41□□□□□ -0.1
RAB40C-208ENST00000564703 CADM2Q8N3J6 435 aa14.41□□□□□ -0.1
RAB40C-208ENST00000564703 TNIP2Q8NFZ5 429 aa14.41□□□□□ -0.1
RAB40C-208ENST00000564703 SLC35B4Q969S0 331 aa14.41□□□□□ -0.1
RAB40C-208ENST00000564703 TUBA1CQ9BQE3 449 aa14.41□□□□□ -0.1
RAB40C-208ENST00000564703 PRRG4Q9BZD6 226 aa14.41□□□□□ -0.1
RAB40C-208ENST00000564703 TIGARQ9NQ88 270 aa14.41□□□□□ -0.1
RAB40C-208ENST00000564703 CMTM6Q9NX76 183 aa14.41□□□□□ -0.1
RAB40C-208ENST00000564703 RPS6KB2Q9UBS0 482 aa14.41□□□□□ -0.1
RAB40C-208ENST00000564703 FAM215AQ9Y5M1 114 aa14.41□□□□□ -0.1
RAB40C-208ENST00000564703 PCNX1Q96RV3 2341 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 CLEC18AA5D8T8 446 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 WIPF3A6NGB9 483 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 CD8B2A6NJW9 211 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 CLCA1A8K7I4 914 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 GMNNO75496 209 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 GLI4P10075 376 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 TFPIP10646 304 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 PSMA4P25789 261 aaKnown RBP14.4□□□□□ -0.1
RAB40C-208ENST00000564703 SLC7A1P30825 629 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 SFTPDP35247 375 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 SLC1A3P43003 542 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 EIF1AXP47813 144 aaKnown RBP14.4□□□□□ -0.1
RAB40C-208ENST00000564703 SUCLG1P53597 346 aaKnown RBP14.4□□□□□ -0.1
RAB40C-208ENST00000564703 CLDN20P56880 219 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 PCBP3P57721 371 aaKnown RBP14.4□□□□□ -0.1
RAB40C-208ENST00000564703 CARD18P57730 90 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 NUP107P57740 925 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 SELENBP1Q13228 472 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 RTL6Q6ICC9 239 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 WBP2NLQ6ICG8 309 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 C16orf89Q6UX73 402 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 CLEC18BQ6UXF7 455 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 PLEKHM3Q6ZWE6 761 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 CCDC80Q76M96 950 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 ZNF808Q8N4W9 903 aaPredicted RBP14.4□□□□□ -0.1
RAB40C-208ENST00000564703 CLEC18CQ8NCF0 446 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 CA5BP1Q8WTZ4 195 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 ASB5Q8WWX0 329 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 OSTF1Q92882 214 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 SDCCAG3Q96C92 435 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 NPAS1Q99742 590 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 TM9SF2Q99805 663 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 TMEM185BQ9H7F4 350 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 SPAG4Q9NPE6 437 aa14.4□□□□□ -0.1
RAB40C-208ENST00000564703 PHF3Q92576 2039 aaKnown RBP14.39□□□□□ -0.11
RAB40C-208ENST00000564703 HSPB2A8KAH6 182 aa14.39□□□□□ -0.11
RAB40C-208ENST00000564703 B2RBV5 119 aa14.39□□□□□ -0.11
RAB40C-208ENST00000564703 ETV2O00321 342 aaPredicted RBP14.39□□□□□ -0.11
RAB40C-208ENST00000564703 AP3D1O14617 1153 aa14.39□□□□□ -0.11
RAB40C-208ENST00000564703 TPST1O60507 370 aa14.39□□□□□ -0.11
RAB40C-208ENST00000564703 SYNGR4O95473 234 aa14.39□□□□□ -0.11
RAB40C-208ENST00000564703 C8BP07358 591 aa14.39□□□□□ -0.11
RAB40C-208ENST00000564703 AGAP20933 346 aa14.39□□□□□ -0.11
RAB40C-208ENST00000564703 CXCR1P25024 350 aa14.39□□□□□ -0.11
RAB40C-208ENST00000564703 TIMP3P35625 211 aa14.39□□□□□ -0.11
RAB40C-208ENST00000564703 ACAA2P42765 397 aaKnown RBP14.39□□□□□ -0.11
RAB40C-208ENST00000564703 POLR2HP52434 150 aaKnown RBP14.39□□□□□ -0.11
RAB40C-208ENST00000564703 MAP2K6P52564 334 aa14.39□□□□□ -0.11
RAB40C-208ENST00000564703 NCALDP61601 193 aa14.39□□□□□ -0.11
RAB40C-208ENST00000564703 DMTNQ08495 405 aa14.39□□□□□ -0.11
RAB40C-208ENST00000564703 HSPB2Q16082 182 aa14.39□□□□□ -0.11
RAB40C-208ENST00000564703 RIPPLY2Q5TAB7 128 aa14.39□□□□□ -0.11
RAB40C-208ENST00000564703 HBMQ6B0K9 141 aa14.39□□□□□ -0.11
RAB40C-208ENST00000564703 PPP4R4Q6NUP7 873 aa14.39□□□□□ -0.11
RAB40C-208ENST00000564703 C3orf33Q6P1S2 294 aa14.39□□□□□ -0.11
RAB40C-208ENST00000564703 RPRMLQ8N4K4 120 aa14.39□□□□□ -0.11
RAB40C-208ENST00000564703 SMYD1Q8NB12 490 aa14.39□□□□□ -0.11
RAB40C-208ENST00000564703 SLC25A43Q8WUT9 341 aaPredicted RBP14.39□□□□□ -0.11
RAB40C-208ENST00000564703 PROX1Q92786 737 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms